data_3R8V # _model_server_result.job_id HWIpKrVoU5Qvgh9m-y8yug _model_server_result.datetime_utc '2024-11-13 11:06:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r8v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":473}' # _entry.id 3R8V # _exptl.entry_id 3R8V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 304.324 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-amino-2-(prop-2-en-1-ylamino)-1,3-thiazol-5-yl](3-nitrophenyl)methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R8V _cell.length_a 53.28 _cell.length_b 71.87 _cell.length_c 72.28 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R8V _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H12 N4 O3 S' _chem_comp.formula_weight 304.324 _chem_comp.id Z62 _chem_comp.mon_nstd_flag . _chem_comp.name '[4-amino-2-(prop-2-en-1-ylamino)-1,3-thiazol-5-yl](3-nitrophenyl)methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 Z62 sing 376 n y N1 C14 Z62 doub 377 n y C2 N3 Z62 sing 378 n n C2 C4 Z62 doub 379 n y N3 HN3 Z62 sing 380 n n N3 HN3A Z62 sing 381 n n C4 C5 Z62 sing 382 n n C4 S13 Z62 sing 383 n y C5 C6 Z62 sing 384 n n C5 O12 Z62 doub 385 n n C6 C7 Z62 doub 386 n y C6 C11 Z62 sing 387 n y C7 C8 Z62 sing 388 n y C7 H7 Z62 sing 389 n n C8 C9 Z62 doub 390 n y C8 N19 Z62 sing 391 n n C9 C10 Z62 sing 392 n y C9 H9 Z62 sing 393 n n C10 C11 Z62 doub 394 n y C10 H10 Z62 sing 395 n n C11 H11 Z62 sing 396 n n S13 C14 Z62 sing 397 n y C14 N15 Z62 sing 398 n n N15 C16 Z62 sing 399 n n N15 HN15 Z62 sing 400 n n C16 C17 Z62 sing 401 n n C16 H16 Z62 sing 402 n n C16 H16A Z62 sing 403 n n C17 C18 Z62 doub 404 n n C17 H17 Z62 sing 405 n n C18 H18 Z62 sing 406 n n C18 H18A Z62 sing 407 n n N19 O20 Z62 doub 408 n n N19 O21 Z62 sing 409 n n # _atom_sites.entry_id 3R8V _atom_sites.fract_transf_matrix[1][1] 0.018769 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013914 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013835 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Z62 A 1 473 1 Z62 Z62 . C 3 HOH A 1 299 1 HOH HOH . C 3 HOH A 2 300 2 HOH HOH . C 3 HOH A 3 301 3 HOH HOH . C 3 HOH A 4 302 4 HOH HOH . C 3 HOH A 5 303 5 HOH HOH . C 3 HOH A 6 304 6 HOH HOH . C 3 HOH A 7 305 7 HOH HOH . C 3 HOH A 8 306 8 HOH HOH . C 3 HOH A 9 307 9 HOH HOH . C 3 HOH A 10 308 10 HOH HOH . C 3 HOH A 11 309 11 HOH HOH . C 3 HOH A 12 310 12 HOH HOH . C 3 HOH A 13 311 13 HOH HOH . C 3 HOH A 14 312 14 HOH HOH . C 3 HOH A 15 313 15 HOH HOH . C 3 HOH A 16 314 16 HOH HOH . C 3 HOH A 17 315 17 HOH HOH . C 3 HOH A 18 316 18 HOH HOH . C 3 HOH A 19 317 19 HOH HOH . C 3 HOH A 20 318 20 HOH HOH . C 3 HOH A 21 319 21 HOH HOH . C 3 HOH A 22 320 22 HOH HOH . C 3 HOH A 23 321 23 HOH HOH . C 3 HOH A 24 322 24 HOH HOH . C 3 HOH A 25 323 25 HOH HOH . C 3 HOH A 26 324 26 HOH HOH . C 3 HOH A 27 326 28 HOH HOH . C 3 HOH A 28 327 29 HOH HOH . C 3 HOH A 29 328 30 HOH HOH . C 3 HOH A 30 329 31 HOH HOH . C 3 HOH A 31 330 32 HOH HOH . C 3 HOH A 32 331 33 HOH HOH . C 3 HOH A 33 332 34 HOH HOH . C 3 HOH A 34 333 35 HOH HOH . C 3 HOH A 35 334 36 HOH HOH . C 3 HOH A 36 335 37 HOH HOH . C 3 HOH A 37 336 38 HOH HOH . C 3 HOH A 38 337 39 HOH HOH . C 3 HOH A 39 338 40 HOH HOH . C 3 HOH A 40 339 41 HOH HOH . C 3 HOH A 41 340 42 HOH HOH . C 3 HOH A 42 341 43 HOH HOH . C 3 HOH A 43 342 44 HOH HOH . C 3 HOH A 44 343 45 HOH HOH . C 3 HOH A 45 344 46 HOH HOH . C 3 HOH A 46 345 47 HOH HOH . C 3 HOH A 47 346 48 HOH HOH . C 3 HOH A 48 347 49 HOH HOH . C 3 HOH A 49 348 50 HOH HOH . C 3 HOH A 50 349 51 HOH HOH . C 3 HOH A 51 350 52 HOH HOH . C 3 HOH A 52 351 53 HOH HOH . C 3 HOH A 53 352 54 HOH HOH . C 3 HOH A 54 353 55 HOH HOH . C 3 HOH A 55 354 56 HOH HOH . C 3 HOH A 56 355 57 HOH HOH . C 3 HOH A 57 356 58 HOH HOH . C 3 HOH A 58 357 59 HOH HOH . C 3 HOH A 59 358 60 HOH HOH . C 3 HOH A 60 359 61 HOH HOH . C 3 HOH A 61 360 62 HOH HOH . C 3 HOH A 62 361 63 HOH HOH . C 3 HOH A 63 362 64 HOH HOH . C 3 HOH A 64 363 65 HOH HOH . C 3 HOH A 65 364 66 HOH HOH . C 3 HOH A 66 365 67 HOH HOH . C 3 HOH A 67 366 68 HOH HOH . C 3 HOH A 68 367 69 HOH HOH . C 3 HOH A 69 368 70 HOH HOH . C 3 HOH A 70 369 71 HOH HOH . C 3 HOH A 71 370 72 HOH HOH . C 3 HOH A 72 371 73 HOH HOH . C 3 HOH A 73 372 74 HOH HOH . C 3 HOH A 74 373 75 HOH HOH . C 3 HOH A 75 374 76 HOH HOH . C 3 HOH A 76 375 77 HOH HOH . C 3 HOH A 77 376 78 HOH HOH . C 3 HOH A 78 377 79 HOH HOH . C 3 HOH A 79 378 80 HOH HOH . C 3 HOH A 80 379 81 HOH HOH . C 3 HOH A 81 380 82 HOH HOH . C 3 HOH A 82 381 83 HOH HOH . C 3 HOH A 83 382 84 HOH HOH . C 3 HOH A 84 383 85 HOH HOH . C 3 HOH A 85 384 86 HOH HOH . C 3 HOH A 86 385 87 HOH HOH . C 3 HOH A 87 386 88 HOH HOH . C 3 HOH A 88 387 89 HOH HOH . C 3 HOH A 89 388 90 HOH HOH . C 3 HOH A 90 389 91 HOH HOH . C 3 HOH A 91 390 92 HOH HOH . C 3 HOH A 92 391 93 HOH HOH . C 3 HOH A 93 392 94 HOH HOH . C 3 HOH A 94 393 95 HOH HOH . C 3 HOH A 95 394 96 HOH HOH . C 3 HOH A 96 395 97 HOH HOH . C 3 HOH A 97 396 98 HOH HOH . C 3 HOH A 98 397 99 HOH HOH . C 3 HOH A 99 398 100 HOH HOH . C 3 HOH A 100 399 101 HOH HOH . C 3 HOH A 101 400 102 HOH HOH . C 3 HOH A 102 401 103 HOH HOH . C 3 HOH A 103 402 104 HOH HOH . C 3 HOH A 104 403 105 HOH HOH . C 3 HOH A 105 404 106 HOH HOH . C 3 HOH A 106 405 107 HOH HOH . C 3 HOH A 107 406 108 HOH HOH . C 3 HOH A 108 407 109 HOH HOH . C 3 HOH A 109 408 110 HOH HOH . C 3 HOH A 110 409 111 HOH HOH . C 3 HOH A 111 410 112 HOH HOH . C 3 HOH A 112 411 113 HOH HOH . C 3 HOH A 113 412 114 HOH HOH . C 3 HOH A 114 413 115 HOH HOH . C 3 HOH A 115 414 116 HOH HOH . C 3 HOH A 116 415 117 HOH HOH . C 3 HOH A 117 416 118 HOH HOH . C 3 HOH A 118 417 119 HOH HOH . C 3 HOH A 119 418 120 HOH HOH . C 3 HOH A 120 419 121 HOH HOH . C 3 HOH A 121 420 122 HOH HOH . C 3 HOH A 122 421 123 HOH HOH . C 3 HOH A 123 422 124 HOH HOH . C 3 HOH A 124 423 125 HOH HOH . C 3 HOH A 125 424 126 HOH HOH . C 3 HOH A 126 425 127 HOH HOH . C 3 HOH A 127 426 128 HOH HOH . C 3 HOH A 128 427 129 HOH HOH . C 3 HOH A 129 428 130 HOH HOH . C 3 HOH A 130 429 131 HOH HOH . C 3 HOH A 131 430 132 HOH HOH . C 3 HOH A 132 431 133 HOH HOH . C 3 HOH A 133 432 134 HOH HOH . C 3 HOH A 134 433 135 HOH HOH . C 3 HOH A 135 434 136 HOH HOH . C 3 HOH A 136 435 137 HOH HOH . C 3 HOH A 137 436 138 HOH HOH . C 3 HOH A 138 437 139 HOH HOH . C 3 HOH A 139 438 140 HOH HOH . C 3 HOH A 140 439 141 HOH HOH . C 3 HOH A 141 440 142 HOH HOH . C 3 HOH A 142 441 143 HOH HOH . C 3 HOH A 143 442 144 HOH HOH . C 3 HOH A 144 443 145 HOH HOH . C 3 HOH A 145 444 146 HOH HOH . C 3 HOH A 146 445 147 HOH HOH . C 3 HOH A 147 446 148 HOH HOH . C 3 HOH A 148 447 149 HOH HOH . C 3 HOH A 149 448 150 HOH HOH . C 3 HOH A 150 449 151 HOH HOH . C 3 HOH A 151 450 152 HOH HOH . C 3 HOH A 152 451 153 HOH HOH . C 3 HOH A 153 452 154 HOH HOH . C 3 HOH A 154 453 155 HOH HOH . C 3 HOH A 155 454 156 HOH HOH . C 3 HOH A 156 456 158 HOH HOH . C 3 HOH A 157 457 159 HOH HOH . C 3 HOH A 158 458 160 HOH HOH . C 3 HOH A 159 459 161 HOH HOH . C 3 HOH A 160 460 162 HOH HOH . C 3 HOH A 161 462 164 HOH HOH . C 3 HOH A 162 463 165 HOH HOH . C 3 HOH A 163 464 166 HOH HOH . C 3 HOH A 164 465 167 HOH HOH . C 3 HOH A 165 466 168 HOH HOH . C 3 HOH A 166 467 169 HOH HOH . C 3 HOH A 167 468 170 HOH HOH . C 3 HOH A 168 469 171 HOH HOH . C 3 HOH A 169 470 172 HOH HOH . C 3 HOH A 170 471 173 HOH HOH . C 3 HOH A 171 472 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 Z62 . . . B 2 -65.044 -81.956 -86.849 1 17.47 ? N1 Z62 473 A 1 HETATM 2 C C2 Z62 . . . B 2 -65.962 -80.985 -86.985 1 17.78 ? C2 Z62 473 A 1 HETATM 3 N N3 Z62 . . . B 2 -66.528 -80.737 -88.199 1 15.37 ? N3 Z62 473 A 1 HETATM 4 C C4 Z62 . . . B 2 -66.245 -80.29 -85.78 1 17.3 ? C4 Z62 473 A 1 HETATM 5 C C5 Z62 . . . B 2 -67.123 -79.238 -85.611 1 18.13 ? C5 Z62 473 A 1 HETATM 6 C C6 Z62 . . . B 2 -67.384 -78.542 -84.31 1 20.67 ? C6 Z62 473 A 1 HETATM 7 C C7 Z62 . . . B 2 -67.548 -79.273 -83.082 1 22.95 ? C7 Z62 473 A 1 HETATM 8 C C8 Z62 . . . B 2 -67.819 -78.609 -81.837 1 26.06 ? C8 Z62 473 A 1 HETATM 9 C C9 Z62 . . . B 2 -67.927 -77.166 -81.864 1 24.45 ? C9 Z62 473 A 1 HETATM 10 C C10 Z62 . . . B 2 -67.767 -76.438 -83.071 1 22.07 ? C10 Z62 473 A 1 HETATM 11 C C11 Z62 . . . B 2 -67.496 -77.116 -84.29 1 20.97 ? C11 Z62 473 A 1 HETATM 12 O O12 Z62 . . . B 2 -67.807 -78.749 -86.661 1 16.88 ? O12 Z62 473 A 1 HETATM 13 S S13 Z62 . . . B 2 -65.317 -80.925 -84.478 1 19.99 ? S13 Z62 473 A 1 HETATM 14 C C14 Z62 . . . B 2 -64.604 -82.044 -85.569 1 18.89 ? C14 Z62 473 A 1 HETATM 15 N N15 Z62 . . . B 2 -63.646 -82.966 -85.201 1 22.14 ? N15 Z62 473 A 1 HETATM 16 C C16 Z62 . . . B 2 -63.248 -83.134 -83.798 1 24.69 ? C16 Z62 473 A 1 HETATM 17 C C17 Z62 . . . B 2 -62.329 -82.026 -83.337 1 27.65 ? C17 Z62 473 A 1 HETATM 18 C C18 Z62 . . . B 2 -62.732 -81.092 -82.255 1 28.45 ? C18 Z62 473 A 1 HETATM 19 N N19 Z62 . . . B 2 -67.964 -79.309 -80.697 1 26.9 ? N19 Z62 473 A 1 HETATM 20 O O20 Z62 . . . B 2 -67.852 -80.64 -80.673 1 28.64 ? O20 Z62 473 A 1 HETATM 21 O O21 Z62 . . . B 2 -68.2 -78.766 -79.641 1 30.24 ? O21 Z62 473 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #