data_3R8Z # _model_server_result.job_id MhhRIO-tDna2ybCIB_oTtg _model_server_result.datetime_utc '2024-11-29 12:47:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r8z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":440}' # _entry.id 3R8Z # _exptl.entry_id 3R8Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.315 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-amino-2-(prop-2-en-1-ylamino)-1,3-thiazol-5-yl](pyridin-4-yl)methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R8Z _cell.length_a 53.1 _cell.length_b 71.36 _cell.length_c 71.28 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R8Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H12 N4 O S' _chem_comp.formula_weight 260.315 _chem_comp.id Z63 _chem_comp.mon_nstd_flag . _chem_comp.name '[4-amino-2-(prop-2-en-1-ylamino)-1,3-thiazol-5-yl](pyridin-4-yl)methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 Z63 sing 376 n y N1 C14 Z63 doub 377 n y C2 N3 Z63 sing 378 n n C2 C4 Z63 doub 379 n y C4 C5 Z63 sing 380 n n C4 S13 Z63 sing 381 n y C5 C6 Z63 sing 382 n n C5 O12 Z63 doub 383 n n C6 C7 Z63 doub 384 n y C6 C11 Z63 sing 385 n y C7 C8 Z63 sing 386 n y C8 N9 Z63 doub 387 n y N9 C10 Z63 sing 388 n y C10 C11 Z63 doub 389 n y S13 C14 Z63 sing 390 n y C14 N15 Z63 sing 391 n n N15 C16 Z63 sing 392 n n C16 C17 Z63 sing 393 n n C17 C18 Z63 doub 394 n n N3 HN3 Z63 sing 395 n n N3 HN3A Z63 sing 396 n n C7 H7 Z63 sing 397 n n C8 H8 Z63 sing 398 n n C10 H10 Z63 sing 399 n n C11 H11 Z63 sing 400 n n N15 HN15 Z63 sing 401 n n C16 H16 Z63 sing 402 n n C16 H16A Z63 sing 403 n n C17 H17 Z63 sing 404 n n C18 H18 Z63 sing 405 n n C18 H18A Z63 sing 406 n n # _atom_sites.entry_id 3R8Z _atom_sites.fract_transf_matrix[1][1] 0.018832 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014013 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014029 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Z63 A 1 440 1 Z63 Z63 . C 3 HOH A 1 299 1 HOH HOH . C 3 HOH A 2 300 2 HOH HOH . C 3 HOH A 3 301 3 HOH HOH . C 3 HOH A 4 302 4 HOH HOH . C 3 HOH A 5 303 5 HOH HOH . C 3 HOH A 6 304 6 HOH HOH . C 3 HOH A 7 305 7 HOH HOH . C 3 HOH A 8 306 8 HOH HOH . C 3 HOH A 9 307 9 HOH HOH . C 3 HOH A 10 308 10 HOH HOH . C 3 HOH A 11 309 11 HOH HOH . C 3 HOH A 12 310 12 HOH HOH . C 3 HOH A 13 311 13 HOH HOH . C 3 HOH A 14 312 14 HOH HOH . C 3 HOH A 15 313 15 HOH HOH . C 3 HOH A 16 314 16 HOH HOH . C 3 HOH A 17 315 17 HOH HOH . C 3 HOH A 18 316 18 HOH HOH . C 3 HOH A 19 317 19 HOH HOH . C 3 HOH A 20 318 20 HOH HOH . C 3 HOH A 21 319 21 HOH HOH . C 3 HOH A 22 320 22 HOH HOH . C 3 HOH A 23 321 23 HOH HOH . C 3 HOH A 24 322 24 HOH HOH . C 3 HOH A 25 323 25 HOH HOH . C 3 HOH A 26 324 26 HOH HOH . C 3 HOH A 27 325 27 HOH HOH . C 3 HOH A 28 326 28 HOH HOH . C 3 HOH A 29 327 29 HOH HOH . C 3 HOH A 30 328 30 HOH HOH . C 3 HOH A 31 329 31 HOH HOH . C 3 HOH A 32 330 32 HOH HOH . C 3 HOH A 33 331 33 HOH HOH . C 3 HOH A 34 332 34 HOH HOH . C 3 HOH A 35 333 35 HOH HOH . C 3 HOH A 36 334 36 HOH HOH . C 3 HOH A 37 335 37 HOH HOH . C 3 HOH A 38 336 38 HOH HOH . C 3 HOH A 39 337 39 HOH HOH . C 3 HOH A 40 338 40 HOH HOH . C 3 HOH A 41 339 41 HOH HOH . C 3 HOH A 42 340 42 HOH HOH . C 3 HOH A 43 341 43 HOH HOH . C 3 HOH A 44 342 44 HOH HOH . C 3 HOH A 45 343 45 HOH HOH . C 3 HOH A 46 344 46 HOH HOH . C 3 HOH A 47 345 47 HOH HOH . C 3 HOH A 48 346 48 HOH HOH . C 3 HOH A 49 347 49 HOH HOH . C 3 HOH A 50 348 50 HOH HOH . C 3 HOH A 51 349 51 HOH HOH . C 3 HOH A 52 350 52 HOH HOH . C 3 HOH A 53 351 53 HOH HOH . C 3 HOH A 54 352 54 HOH HOH . C 3 HOH A 55 353 55 HOH HOH . C 3 HOH A 56 354 56 HOH HOH . C 3 HOH A 57 355 57 HOH HOH . C 3 HOH A 58 356 58 HOH HOH . C 3 HOH A 59 357 59 HOH HOH . C 3 HOH A 60 358 60 HOH HOH . C 3 HOH A 61 359 61 HOH HOH . C 3 HOH A 62 360 62 HOH HOH . C 3 HOH A 63 361 63 HOH HOH . C 3 HOH A 64 362 64 HOH HOH . C 3 HOH A 65 363 65 HOH HOH . C 3 HOH A 66 364 66 HOH HOH . C 3 HOH A 67 365 67 HOH HOH . C 3 HOH A 68 366 68 HOH HOH . C 3 HOH A 69 367 69 HOH HOH . C 3 HOH A 70 368 70 HOH HOH . C 3 HOH A 71 369 71 HOH HOH . C 3 HOH A 72 370 72 HOH HOH . C 3 HOH A 73 371 73 HOH HOH . C 3 HOH A 74 372 74 HOH HOH . C 3 HOH A 75 373 75 HOH HOH . C 3 HOH A 76 374 76 HOH HOH . C 3 HOH A 77 375 77 HOH HOH . C 3 HOH A 78 376 78 HOH HOH . C 3 HOH A 79 377 79 HOH HOH . C 3 HOH A 80 378 80 HOH HOH . C 3 HOH A 81 379 81 HOH HOH . C 3 HOH A 82 380 82 HOH HOH . C 3 HOH A 83 381 83 HOH HOH . C 3 HOH A 84 382 84 HOH HOH . C 3 HOH A 85 383 85 HOH HOH . C 3 HOH A 86 384 86 HOH HOH . C 3 HOH A 87 385 87 HOH HOH . C 3 HOH A 88 386 88 HOH HOH . C 3 HOH A 89 387 89 HOH HOH . C 3 HOH A 90 388 90 HOH HOH . C 3 HOH A 91 389 91 HOH HOH . C 3 HOH A 92 390 92 HOH HOH . C 3 HOH A 93 391 93 HOH HOH . C 3 HOH A 94 392 94 HOH HOH . C 3 HOH A 95 393 95 HOH HOH . C 3 HOH A 96 394 96 HOH HOH . C 3 HOH A 97 395 97 HOH HOH . C 3 HOH A 98 396 98 HOH HOH . C 3 HOH A 99 397 99 HOH HOH . C 3 HOH A 100 398 100 HOH HOH . C 3 HOH A 101 399 101 HOH HOH . C 3 HOH A 102 400 102 HOH HOH . C 3 HOH A 103 401 103 HOH HOH . C 3 HOH A 104 402 104 HOH HOH . C 3 HOH A 105 403 105 HOH HOH . C 3 HOH A 106 404 106 HOH HOH . C 3 HOH A 107 405 107 HOH HOH . C 3 HOH A 108 406 108 HOH HOH . C 3 HOH A 109 407 109 HOH HOH . C 3 HOH A 110 408 110 HOH HOH . C 3 HOH A 111 409 111 HOH HOH . C 3 HOH A 112 410 112 HOH HOH . C 3 HOH A 113 411 113 HOH HOH . C 3 HOH A 114 412 114 HOH HOH . C 3 HOH A 115 413 115 HOH HOH . C 3 HOH A 116 414 116 HOH HOH . C 3 HOH A 117 415 117 HOH HOH . C 3 HOH A 118 416 118 HOH HOH . C 3 HOH A 119 417 119 HOH HOH . C 3 HOH A 120 418 120 HOH HOH . C 3 HOH A 121 419 121 HOH HOH . C 3 HOH A 122 420 122 HOH HOH . C 3 HOH A 123 421 123 HOH HOH . C 3 HOH A 124 422 124 HOH HOH . C 3 HOH A 125 423 125 HOH HOH . C 3 HOH A 126 424 126 HOH HOH . C 3 HOH A 127 425 127 HOH HOH . C 3 HOH A 128 426 128 HOH HOH . C 3 HOH A 129 427 129 HOH HOH . C 3 HOH A 130 428 130 HOH HOH . C 3 HOH A 131 429 131 HOH HOH . C 3 HOH A 132 430 132 HOH HOH . C 3 HOH A 133 431 133 HOH HOH . C 3 HOH A 134 432 134 HOH HOH . C 3 HOH A 135 433 135 HOH HOH . C 3 HOH A 136 434 136 HOH HOH . C 3 HOH A 137 435 137 HOH HOH . C 3 HOH A 138 436 138 HOH HOH . C 3 HOH A 139 437 139 HOH HOH . C 3 HOH A 140 438 140 HOH HOH . C 3 HOH A 141 439 141 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 Z63 . . . B 2 -64.741 -46.553 -49.063 1 24.41 ? N1 Z63 440 A 1 HETATM 2 C C2 Z63 . . . B 2 -65.744 -45.743 -49.402 1 24.58 ? C2 Z63 440 A 1 HETATM 3 N N3 Z63 . . . B 2 -66.135 -45.663 -50.682 1 23.33 ? N3 Z63 440 A 1 HETATM 4 C C4 Z63 . . . B 2 -66.306 -45.019 -48.34 1 26.4 ? C4 Z63 440 A 1 HETATM 5 C C5 Z63 . . . B 2 -67.359 -44.104 -48.441 1 28.96 ? C5 Z63 440 A 1 HETATM 6 C C6 Z63 . . . B 2 -67.951 -43.337 -47.296 1 31.1 ? C6 Z63 440 A 1 HETATM 7 C C7 Z63 . . . B 2 -67.142 -42.597 -46.375 1 32.82 ? C7 Z63 440 A 1 HETATM 8 C C8 Z63 . . . B 2 -67.765 -41.89 -45.313 1 33.44 ? C8 Z63 440 A 1 HETATM 9 N N9 Z63 . . . B 2 -69.145 -41.923 -45.182 1 34.37 ? N9 Z63 440 A 1 HETATM 10 C C10 Z63 . . . B 2 -69.957 -42.626 -46.053 1 33.76 ? C10 Z63 440 A 1 HETATM 11 C C11 Z63 . . . B 2 -69.379 -43.348 -47.128 1 32.17 ? C11 Z63 440 A 1 HETATM 12 O O12 Z63 . . . B 2 -67.931 -43.854 -49.647 1 28.33 ? O12 Z63 440 A 1 HETATM 13 S S13 Z63 . . . B 2 -65.503 -45.411 -46.851 1 26.26 ? S13 Z63 440 A 1 HETATM 14 C C14 Z63 . . . B 2 -64.483 -46.494 -47.748 1 26.82 ? C14 Z63 440 A 1 HETATM 15 N N15 Z63 . . . B 2 -63.477 -47.246 -47.203 1 27.65 ? N15 Z63 440 A 1 HETATM 16 C C16 Z63 . . . B 2 -63.136 -47.116 -45.799 1 28.91 ? C16 Z63 440 A 1 HETATM 17 C C17 Z63 . . . B 2 -61.862 -46.345 -45.638 1 30.56 ? C17 Z63 440 A 1 HETATM 18 C C18 Z63 . . . B 2 -61.849 -44.882 -45.644 1 32.9 ? C18 Z63 440 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #