data_3R94 # _model_server_result.job_id 0jlXB97TanUn78Mx8lc5BQ _model_server_result.datetime_utc '2024-10-18 04:22:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r94 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":333}' # _entry.id 3R94 # _exptl.entry_id 3R94 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R94 _cell.length_a 56.865 _cell.length_b 63.77 _cell.length_c 95.666 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R94 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3R94 _atom_sites.fract_transf_matrix[1][1] 0.017586 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015681 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 700 700 NAP NAP . C 3 FLR A 1 332 332 FLR FLR . D 4 EDO A 1 333 333 EDO EDO . E 5 HOH A 1 334 334 HOH HOH . E 5 HOH A 2 335 335 HOH HOH . E 5 HOH A 3 336 336 HOH HOH . E 5 HOH A 4 337 337 HOH HOH . E 5 HOH A 5 338 338 HOH HOH . E 5 HOH A 6 339 339 HOH HOH . E 5 HOH A 7 340 340 HOH HOH . E 5 HOH A 8 341 341 HOH HOH . E 5 HOH A 9 342 342 HOH HOH . E 5 HOH A 10 343 343 HOH HOH . E 5 HOH A 11 344 344 HOH HOH . E 5 HOH A 12 345 345 HOH HOH . E 5 HOH A 13 346 346 HOH HOH . E 5 HOH A 14 347 347 HOH HOH . E 5 HOH A 15 348 348 HOH HOH . E 5 HOH A 16 349 349 HOH HOH . E 5 HOH A 17 350 350 HOH HOH . E 5 HOH A 18 351 351 HOH HOH . E 5 HOH A 19 352 352 HOH HOH . E 5 HOH A 20 353 353 HOH HOH . E 5 HOH A 21 354 354 HOH HOH . E 5 HOH A 22 355 355 HOH HOH . E 5 HOH A 23 356 356 HOH HOH . E 5 HOH A 24 357 357 HOH HOH . E 5 HOH A 25 358 358 HOH HOH . E 5 HOH A 26 359 359 HOH HOH . E 5 HOH A 27 360 360 HOH HOH . E 5 HOH A 28 361 361 HOH HOH . E 5 HOH A 29 362 362 HOH HOH . E 5 HOH A 30 363 363 HOH HOH . E 5 HOH A 31 364 364 HOH HOH . E 5 HOH A 32 365 365 HOH HOH . E 5 HOH A 33 366 366 HOH HOH . E 5 HOH A 34 367 367 HOH HOH . E 5 HOH A 35 368 368 HOH HOH . E 5 HOH A 36 369 369 HOH HOH . E 5 HOH A 37 370 370 HOH HOH . E 5 HOH A 38 371 371 HOH HOH . E 5 HOH A 39 372 372 HOH HOH . E 5 HOH A 40 373 373 HOH HOH . E 5 HOH A 41 374 374 HOH HOH . E 5 HOH A 42 375 375 HOH HOH . E 5 HOH A 43 376 376 HOH HOH . E 5 HOH A 44 377 377 HOH HOH . E 5 HOH A 45 378 378 HOH HOH . E 5 HOH A 46 379 379 HOH HOH . E 5 HOH A 47 380 380 HOH HOH . E 5 HOH A 48 381 381 HOH HOH . E 5 HOH A 49 382 382 HOH HOH . E 5 HOH A 50 383 383 HOH HOH . E 5 HOH A 51 384 384 HOH HOH . E 5 HOH A 52 385 385 HOH HOH . E 5 HOH A 53 386 386 HOH HOH . E 5 HOH A 54 387 387 HOH HOH . E 5 HOH A 55 388 388 HOH HOH . E 5 HOH A 56 389 389 HOH HOH . E 5 HOH A 57 390 390 HOH HOH . E 5 HOH A 58 391 391 HOH HOH . E 5 HOH A 59 392 392 HOH HOH . E 5 HOH A 60 393 393 HOH HOH . E 5 HOH A 61 394 394 HOH HOH . E 5 HOH A 62 395 395 HOH HOH . E 5 HOH A 63 396 396 HOH HOH . E 5 HOH A 64 397 397 HOH HOH . E 5 HOH A 65 398 398 HOH HOH . E 5 HOH A 66 399 399 HOH HOH . E 5 HOH A 67 400 400 HOH HOH . E 5 HOH A 68 401 401 HOH HOH . E 5 HOH A 69 402 402 HOH HOH . E 5 HOH A 70 403 403 HOH HOH . E 5 HOH A 71 404 404 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 11.655 31.94 2.302 1 23.29 ? C1 EDO 333 A 1 HETATM 2 O O1 EDO . . . D 4 12.475 32.209 3.496 1 20.01 ? O1 EDO 333 A 1 HETATM 3 C C2 EDO . . . D 4 10.556 30.957 2.718 1 28.58 ? C2 EDO 333 A 1 HETATM 4 O O2 EDO . . . D 4 11.041 29.59 2.761 1 23.59 ? O2 EDO 333 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #