data_3RAP
#
_model_server_result.job_id            3-AIB9Z85460syNatvbJaw 
_model_server_result.datetime_utc      '2024-11-14 12:42:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rap 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    3RAP 
#
_exptl.entry_id    3RAP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.07 
_cell.angle_gamma         90 
_cell.entry_id            3RAP 
_cell.length_a            41.01 
_cell.length_b            59.83 
_cell.length_c            68.44 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RAP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 17 R SER 17 1_555 C MG MG . R MG 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? 
metalc ? metalc2 A OG1 THR 35 R THR 35 1_555 C MG MG . R MG 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.76 ? 
metalc ? metalc3 D O3G GTP . R GTP 180 1_555 C MG MG . R MG 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? 
metalc ? metalc4 D O2B GTP . R GTP 180 1_555 C MG MG . R MG 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
metalc ? metalc5 C MG MG . R MG 200 1_555 G O HOH . R HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc6 C MG MG . R MG 200 1_555 G O HOH . R HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? 
metalc ? metalc7 B OG SER 17 S SER 17 1_555 E MG MG . S MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? 
metalc ? metalc8 B OG1 THR 35 S THR 35 1_555 E MG MG . S MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? 
metalc ? metalc9 F O3G GTP . S GTP 181 1_555 E MG MG . S MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? 
metalc ? metalc10 F O1B GTP . S GTP 181 1_555 E MG MG . S MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? 
metalc ? metalc11 E MG MG . S MG 201 1_555 H O HOH . S HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? 
metalc ? metalc12 E MG MG . S MG 201 1_555 H O HOH . S HOH 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.881 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3RAP 
_atom_sites.fract_transf_matrix[1][1]    0.024384 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003024 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016714 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014723 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG R 1 200 200 MG MG . 
D 3 GTP R 1 180 180 GTP GTP . 
E 2 MG S 1 201 201 MG MG . 
F 3 GTP S 1 181 181 GTP GTP . 
G 4 HOH R 1 201 1 HOH HOH . 
G 4 HOH R 2 202 2 HOH HOH . 
G 4 HOH R 3 203 5 HOH HOH . 
G 4 HOH R 4 204 7 HOH HOH . 
G 4 HOH R 5 205 8 HOH HOH . 
G 4 HOH R 6 206 9 HOH HOH . 
G 4 HOH R 7 207 10 HOH HOH . 
G 4 HOH R 8 208 11 HOH HOH . 
G 4 HOH R 9 209 12 HOH HOH . 
G 4 HOH R 10 210 16 HOH HOH . 
G 4 HOH R 11 211 20 HOH HOH . 
G 4 HOH R 12 212 21 HOH HOH . 
G 4 HOH R 13 213 25 HOH HOH . 
G 4 HOH R 14 214 26 HOH HOH . 
G 4 HOH R 15 215 27 HOH HOH . 
G 4 HOH R 16 216 28 HOH HOH . 
G 4 HOH R 17 217 29 HOH HOH . 
G 4 HOH R 18 218 30 HOH HOH . 
G 4 HOH R 19 219 32 HOH HOH . 
G 4 HOH R 20 220 33 HOH HOH . 
G 4 HOH R 21 221 34 HOH HOH . 
G 4 HOH R 22 222 35 HOH HOH . 
G 4 HOH R 23 223 36 HOH HOH . 
G 4 HOH R 24 224 37 HOH HOH . 
G 4 HOH R 25 225 38 HOH HOH . 
G 4 HOH R 26 226 39 HOH HOH . 
G 4 HOH R 27 227 40 HOH HOH . 
G 4 HOH R 28 228 41 HOH HOH . 
G 4 HOH R 29 229 42 HOH HOH . 
G 4 HOH R 30 230 43 HOH HOH . 
G 4 HOH R 31 231 44 HOH HOH . 
G 4 HOH R 32 232 45 HOH HOH . 
G 4 HOH R 33 233 46 HOH HOH . 
G 4 HOH R 34 234 47 HOH HOH . 
G 4 HOH R 35 235 48 HOH HOH . 
G 4 HOH R 36 236 49 HOH HOH . 
G 4 HOH R 37 237 62 HOH HOH . 
G 4 HOH R 38 238 63 HOH HOH . 
G 4 HOH R 39 239 64 HOH HOH . 
G 4 HOH R 40 240 65 HOH HOH . 
G 4 HOH R 41 241 66 HOH HOH . 
G 4 HOH R 42 242 71 HOH HOH . 
G 4 HOH R 43 243 72 HOH HOH . 
G 4 HOH R 44 244 73 HOH HOH . 
G 4 HOH R 45 245 74 HOH HOH . 
G 4 HOH R 46 246 77 HOH HOH . 
G 4 HOH R 47 247 79 HOH HOH . 
G 4 HOH R 48 248 80 HOH HOH . 
G 4 HOH R 49 249 81 HOH HOH . 
G 4 HOH R 50 250 82 HOH HOH . 
G 4 HOH R 51 251 83 HOH HOH . 
G 4 HOH R 52 252 84 HOH HOH . 
G 4 HOH R 53 253 91 HOH HOH . 
G 4 HOH R 54 254 93 HOH HOH . 
H 4 HOH S 1 202 3 HOH HOH . 
H 4 HOH S 2 203 4 HOH HOH . 
H 4 HOH S 3 204 6 HOH HOH . 
H 4 HOH S 4 205 13 HOH HOH . 
H 4 HOH S 5 206 14 HOH HOH . 
H 4 HOH S 6 207 15 HOH HOH . 
H 4 HOH S 7 208 17 HOH HOH . 
H 4 HOH S 8 209 18 HOH HOH . 
H 4 HOH S 9 210 19 HOH HOH . 
H 4 HOH S 10 211 22 HOH HOH . 
H 4 HOH S 11 212 23 HOH HOH . 
H 4 HOH S 12 213 24 HOH HOH . 
H 4 HOH S 13 214 31 HOH HOH . 
H 4 HOH S 14 215 50 HOH HOH . 
H 4 HOH S 15 216 51 HOH HOH . 
H 4 HOH S 16 217 52 HOH HOH . 
H 4 HOH S 17 218 53 HOH HOH . 
H 4 HOH S 18 219 54 HOH HOH . 
H 4 HOH S 19 220 55 HOH HOH . 
H 4 HOH S 20 221 56 HOH HOH . 
H 4 HOH S 21 222 57 HOH HOH . 
H 4 HOH S 22 223 58 HOH HOH . 
H 4 HOH S 23 224 59 HOH HOH . 
H 4 HOH S 24 225 60 HOH HOH . 
H 4 HOH S 25 226 61 HOH HOH . 
H 4 HOH S 26 227 67 HOH HOH . 
H 4 HOH S 27 228 68 HOH HOH . 
H 4 HOH S 28 229 69 HOH HOH . 
H 4 HOH S 29 230 70 HOH HOH . 
H 4 HOH S 30 231 75 HOH HOH . 
H 4 HOH S 31 232 76 HOH HOH . 
H 4 HOH S 32 233 78 HOH HOH . 
H 4 HOH S 33 234 85 HOH HOH . 
H 4 HOH S 34 235 86 HOH HOH . 
H 4 HOH S 35 236 87 HOH HOH . 
H 4 HOH S 36 237 88 HOH HOH . 
H 4 HOH S 37 238 89 HOH HOH . 
H 4 HOH S 38 239 90 HOH HOH . 
H 4 HOH S 39 240 92 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               35.523 
_atom_site.Cartn_y               13.711 
_atom_site.Cartn_z               58.882 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        10.4 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          S 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           213 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           1 
#