data_3RAS
#
_model_server_result.job_id            1npCRRVvcg1ysEseHO8Arw 
_model_server_result.datetime_utc      '2024-10-18 16:20:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ras 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":392}' 
#
_entry.id    3RAS 
#
_exptl.entry_id    3RAS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.28 
_cell.angle_gamma         90 
_cell.entry_id            3RAS 
_cell.length_a            67.25 
_cell.length_b            65.179 
_cell.length_c            85.408 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RAS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 160 A ASP 151 1_555 F MN MN . A MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc2 A OE1 GLU 162 A GLU 153 1_555 F MN MN . A MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc3 A OE1 GLU 231 A GLU 222 1_555 F MN MN . A MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc4 D O2 FM5 . A FM5 390 1_555 F MN MN . A MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc5 D O1 FM5 . A FM5 390 1_555 F MN MN . A MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc6 E O2 DCV . A DCV 391 1_555 F MN MN . A MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc7 E O1 DCV . A DCV 391 1_555 F MN MN . A MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? 
metalc ? metalc8 E N1 DCV . A DCV 391 1_555 F MN MN . A MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? 
metalc ? metalc9 B OD1 ASP 160 B ASP 151 1_555 J MN MN . B MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc10 B OD2 ASP 160 B ASP 151 1_555 J MN MN . B MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? 
metalc ? metalc11 B OE1 GLU 162 B GLU 153 1_555 J MN MN . B MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? 
metalc ? metalc12 B OE1 GLU 231 B GLU 222 1_555 J MN MN . B MN 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc13 J MN MN . B MN 392 1_555 M O HOH . B HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3RAS 
_atom_sites.fract_transf_matrix[1][1]    0.01487 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002966 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015342 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011939 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 1391 1391 NDP NDP . 
D 3 FM5 A 1 390 1 FM5 FM5 . 
E 4 DCV A 1 391 2 DCV DCV . 
F 5 MN A 1 392 1 MN MN . 
G 2 NDP B 1 1392 1392 NDP NDP . 
H 3 FM5 B 1 390 3 FM5 FM5 . 
I 4 DCV B 1 391 4 DCV DCV . 
J 5 MN B 1 392 2 MN MN . 
K 6 SO4 B 1 393 1 SO4 SO4 . 
L 7 HOH A 1 393 1 HOH HOH . 
L 7 HOH A 2 394 3 HOH HOH . 
L 7 HOH A 3 395 4 HOH HOH . 
L 7 HOH A 4 396 8 HOH HOH . 
L 7 HOH A 5 397 9 HOH HOH . 
L 7 HOH A 6 398 11 HOH HOH . 
L 7 HOH A 7 399 12 HOH HOH . 
L 7 HOH A 8 400 19 HOH HOH . 
L 7 HOH A 9 401 20 HOH HOH . 
L 7 HOH A 10 402 22 HOH HOH . 
L 7 HOH A 11 403 25 HOH HOH . 
L 7 HOH A 12 404 28 HOH HOH . 
L 7 HOH A 13 405 29 HOH HOH . 
L 7 HOH A 14 406 34 HOH HOH . 
L 7 HOH A 15 407 36 HOH HOH . 
L 7 HOH A 16 408 37 HOH HOH . 
L 7 HOH A 17 409 42 HOH HOH . 
L 7 HOH A 18 410 43 HOH HOH . 
L 7 HOH A 19 411 49 HOH HOH . 
L 7 HOH A 20 412 51 HOH HOH . 
L 7 HOH A 21 413 52 HOH HOH . 
L 7 HOH A 22 414 53 HOH HOH . 
L 7 HOH A 23 415 54 HOH HOH . 
L 7 HOH A 24 416 56 HOH HOH . 
L 7 HOH A 25 417 60 HOH HOH . 
L 7 HOH A 26 418 66 HOH HOH . 
L 7 HOH A 27 419 68 HOH HOH . 
L 7 HOH A 28 420 71 HOH HOH . 
L 7 HOH A 29 421 72 HOH HOH . 
L 7 HOH A 30 422 76 HOH HOH . 
L 7 HOH A 31 423 82 HOH HOH . 
L 7 HOH A 32 424 83 HOH HOH . 
L 7 HOH A 33 425 84 HOH HOH . 
L 7 HOH A 34 426 85 HOH HOH . 
L 7 HOH A 35 427 86 HOH HOH . 
L 7 HOH A 36 428 91 HOH HOH . 
L 7 HOH A 37 429 93 HOH HOH . 
L 7 HOH A 38 430 96 HOH HOH . 
L 7 HOH A 39 431 97 HOH HOH . 
L 7 HOH A 40 432 99 HOH HOH . 
L 7 HOH A 41 433 102 HOH HOH . 
L 7 HOH A 42 434 104 HOH HOH . 
L 7 HOH A 43 435 105 HOH HOH . 
L 7 HOH A 44 436 107 HOH HOH . 
L 7 HOH A 45 437 109 HOH HOH . 
L 7 HOH A 46 438 110 HOH HOH . 
L 7 HOH A 47 439 111 HOH HOH . 
L 7 HOH A 48 440 114 HOH HOH . 
L 7 HOH A 49 441 117 HOH HOH . 
L 7 HOH A 50 442 16 HOH HOH . 
L 7 HOH A 51 443 64 HOH HOH . 
M 7 HOH B 1 394 2 HOH HOH . 
M 7 HOH B 2 395 5 HOH HOH . 
M 7 HOH B 3 396 6 HOH HOH . 
M 7 HOH B 4 397 7 HOH HOH . 
M 7 HOH B 5 398 10 HOH HOH . 
M 7 HOH B 6 399 13 HOH HOH . 
M 7 HOH B 7 400 14 HOH HOH . 
M 7 HOH B 8 401 15 HOH HOH . 
M 7 HOH B 9 403 17 HOH HOH . 
M 7 HOH B 10 404 18 HOH HOH . 
M 7 HOH B 11 405 21 HOH HOH . 
M 7 HOH B 12 406 23 HOH HOH . 
M 7 HOH B 13 407 24 HOH HOH . 
M 7 HOH B 14 408 26 HOH HOH . 
M 7 HOH B 15 409 27 HOH HOH . 
M 7 HOH B 16 410 30 HOH HOH . 
M 7 HOH B 17 411 31 HOH HOH . 
M 7 HOH B 18 412 32 HOH HOH . 
M 7 HOH B 19 413 33 HOH HOH . 
M 7 HOH B 20 414 35 HOH HOH . 
M 7 HOH B 21 415 38 HOH HOH . 
M 7 HOH B 22 416 39 HOH HOH . 
M 7 HOH B 23 417 40 HOH HOH . 
M 7 HOH B 24 418 41 HOH HOH . 
M 7 HOH B 25 419 44 HOH HOH . 
M 7 HOH B 26 420 45 HOH HOH . 
M 7 HOH B 27 421 46 HOH HOH . 
M 7 HOH B 28 422 47 HOH HOH . 
M 7 HOH B 29 423 48 HOH HOH . 
M 7 HOH B 30 424 50 HOH HOH . 
M 7 HOH B 31 425 55 HOH HOH . 
M 7 HOH B 32 426 57 HOH HOH . 
M 7 HOH B 33 427 58 HOH HOH . 
M 7 HOH B 34 428 59 HOH HOH . 
M 7 HOH B 35 429 61 HOH HOH . 
M 7 HOH B 36 430 62 HOH HOH . 
M 7 HOH B 37 431 63 HOH HOH . 
M 7 HOH B 38 433 65 HOH HOH . 
M 7 HOH B 39 434 67 HOH HOH . 
M 7 HOH B 40 435 69 HOH HOH . 
M 7 HOH B 41 436 70 HOH HOH . 
M 7 HOH B 42 437 73 HOH HOH . 
M 7 HOH B 43 438 74 HOH HOH . 
M 7 HOH B 44 439 75 HOH HOH . 
M 7 HOH B 45 440 77 HOH HOH . 
M 7 HOH B 46 441 78 HOH HOH . 
M 7 HOH B 47 442 79 HOH HOH . 
M 7 HOH B 48 443 80 HOH HOH . 
M 7 HOH B 49 444 81 HOH HOH . 
M 7 HOH B 50 445 87 HOH HOH . 
M 7 HOH B 51 446 88 HOH HOH . 
M 7 HOH B 52 447 89 HOH HOH . 
M 7 HOH B 53 448 90 HOH HOH . 
M 7 HOH B 54 449 92 HOH HOH . 
M 7 HOH B 55 450 94 HOH HOH . 
M 7 HOH B 56 451 95 HOH HOH . 
M 7 HOH B 57 452 98 HOH HOH . 
M 7 HOH B 58 453 100 HOH HOH . 
M 7 HOH B 59 454 101 HOH HOH . 
M 7 HOH B 60 455 103 HOH HOH . 
M 7 HOH B 61 456 106 HOH HOH . 
M 7 HOH B 62 457 108 HOH HOH . 
M 7 HOH B 63 458 112 HOH HOH . 
M 7 HOH B 64 459 113 HOH HOH . 
M 7 HOH B 65 460 115 HOH HOH . 
M 7 HOH B 66 461 116 HOH HOH . 
M 7 HOH B 67 462 118 HOH HOH . 
M 7 HOH B 68 463 119 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               22.27 
_atom_site.Cartn_y               -3.669 
_atom_site.Cartn_z               -5.418 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        66.79 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           392 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#