data_3RC7 # _model_server_result.job_id ByQpxy1q6V3NgM2ZW9unhA _model_server_result.datetime_utc '2024-10-11 21:54:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rc7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":336}' # _entry.id 3RC7 # _exptl.entry_id 3RC7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RC7 _cell.length_a 72.816 _cell.length_b 104.225 _cell.length_c 145.524 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RC7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ARG 341 A ARG 323 1_555 D NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? metalc ? metalc2 A O THR 342 A THR 324 1_555 D NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.024 ? metalc ? metalc3 A O ALA 344 A ALA 326 1_555 D NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? metalc ? metalc4 A OD2 ASP 346 A ASP 328 1_555 D NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 340 n n P O2 PO4 sing 341 n n P O3 PO4 sing 342 n n P O4 PO4 sing 343 n n # _atom_sites.entry_id 3RC7 _atom_sites.fract_transf_matrix[1][1] 0.013733 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009595 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006872 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 333 1 NAP NAP . C 3 CL A 1 334 1 CL CL . D 4 NA A 1 335 1 NA NA . E 5 PO4 A 1 336 1 PO4 PO4 . F 6 TLO A 1 337 301 TLO TLO . G 3 CL A 1 338 1 CL CL . H 7 HOH A 1 339 1 HOH HOH . H 7 HOH A 2 340 2 HOH HOH . H 7 HOH A 3 341 3 HOH HOH . H 7 HOH A 4 342 4 HOH HOH . H 7 HOH A 5 343 5 HOH HOH . H 7 HOH A 6 344 6 HOH HOH . H 7 HOH A 7 345 7 HOH HOH . H 7 HOH A 8 346 8 HOH HOH . H 7 HOH A 9 347 9 HOH HOH . H 7 HOH A 10 348 10 HOH HOH . H 7 HOH A 11 349 12 HOH HOH . H 7 HOH A 12 350 13 HOH HOH . H 7 HOH A 13 351 15 HOH HOH . H 7 HOH A 14 352 16 HOH HOH . H 7 HOH A 15 353 17 HOH HOH . H 7 HOH A 16 354 19 HOH HOH . H 7 HOH A 17 355 21 HOH HOH . H 7 HOH A 18 356 22 HOH HOH . H 7 HOH A 19 357 24 HOH HOH . H 7 HOH A 20 358 25 HOH HOH . H 7 HOH A 21 359 26 HOH HOH . H 7 HOH A 22 360 27 HOH HOH . H 7 HOH A 23 361 28 HOH HOH . H 7 HOH A 24 362 29 HOH HOH . H 7 HOH A 25 363 30 HOH HOH . H 7 HOH A 26 364 31 HOH HOH . H 7 HOH A 27 365 32 HOH HOH . H 7 HOH A 28 366 33 HOH HOH . H 7 HOH A 29 367 34 HOH HOH . H 7 HOH A 30 368 35 HOH HOH . H 7 HOH A 31 369 36 HOH HOH . H 7 HOH A 32 370 37 HOH HOH . H 7 HOH A 33 371 38 HOH HOH . H 7 HOH A 34 372 39 HOH HOH . H 7 HOH A 35 373 40 HOH HOH . H 7 HOH A 36 374 41 HOH HOH . H 7 HOH A 37 375 43 HOH HOH . H 7 HOH A 38 376 44 HOH HOH . H 7 HOH A 39 377 45 HOH HOH . H 7 HOH A 40 378 46 HOH HOH . H 7 HOH A 41 379 47 HOH HOH . H 7 HOH A 42 380 48 HOH HOH . H 7 HOH A 43 381 49 HOH HOH . H 7 HOH A 44 382 50 HOH HOH . H 7 HOH A 45 383 51 HOH HOH . H 7 HOH A 46 384 52 HOH HOH . H 7 HOH A 47 385 53 HOH HOH . H 7 HOH A 48 386 54 HOH HOH . H 7 HOH A 49 387 56 HOH HOH . H 7 HOH A 50 388 58 HOH HOH . H 7 HOH A 51 389 59 HOH HOH . H 7 HOH A 52 390 60 HOH HOH . H 7 HOH A 53 391 61 HOH HOH . H 7 HOH A 54 392 62 HOH HOH . H 7 HOH A 55 393 63 HOH HOH . H 7 HOH A 56 394 64 HOH HOH . H 7 HOH A 57 395 65 HOH HOH . H 7 HOH A 58 396 66 HOH HOH . H 7 HOH A 59 397 67 HOH HOH . H 7 HOH A 60 398 68 HOH HOH . H 7 HOH A 61 399 69 HOH HOH . H 7 HOH A 62 400 70 HOH HOH . H 7 HOH A 63 401 71 HOH HOH . H 7 HOH A 64 402 73 HOH HOH . H 7 HOH A 65 403 74 HOH HOH . H 7 HOH A 66 404 75 HOH HOH . H 7 HOH A 67 405 76 HOH HOH . H 7 HOH A 68 406 77 HOH HOH . H 7 HOH A 69 407 78 HOH HOH . H 7 HOH A 70 408 79 HOH HOH . H 7 HOH A 71 409 80 HOH HOH . H 7 HOH A 72 410 81 HOH HOH . H 7 HOH A 73 411 82 HOH HOH . H 7 HOH A 74 412 83 HOH HOH . H 7 HOH A 75 413 84 HOH HOH . H 7 HOH A 76 414 85 HOH HOH . H 7 HOH A 77 415 86 HOH HOH . H 7 HOH A 78 416 87 HOH HOH . H 7 HOH A 79 417 88 HOH HOH . H 7 HOH A 80 418 89 HOH HOH . H 7 HOH A 81 419 94 HOH HOH . H 7 HOH A 82 420 95 HOH HOH . H 7 HOH A 83 421 97 HOH HOH . H 7 HOH A 84 422 100 HOH HOH . H 7 HOH A 85 423 101 HOH HOH . H 7 HOH A 86 424 102 HOH HOH . H 7 HOH A 87 425 103 HOH HOH . H 7 HOH A 88 426 104 HOH HOH . H 7 HOH A 89 427 105 HOH HOH . H 7 HOH A 90 428 106 HOH HOH . H 7 HOH A 91 429 107 HOH HOH . H 7 HOH A 92 430 108 HOH HOH . H 7 HOH A 93 431 109 HOH HOH . H 7 HOH A 94 432 110 HOH HOH . H 7 HOH A 95 433 111 HOH HOH . H 7 HOH A 96 434 112 HOH HOH . H 7 HOH A 97 435 113 HOH HOH . H 7 HOH A 98 436 115 HOH HOH . H 7 HOH A 99 437 117 HOH HOH . H 7 HOH A 100 438 118 HOH HOH . H 7 HOH A 101 439 119 HOH HOH . H 7 HOH A 102 440 120 HOH HOH . H 7 HOH A 103 441 121 HOH HOH . H 7 HOH A 104 442 122 HOH HOH . H 7 HOH A 105 443 123 HOH HOH . H 7 HOH A 106 444 125 HOH HOH . H 7 HOH A 107 445 126 HOH HOH . H 7 HOH A 108 446 127 HOH HOH . H 7 HOH A 109 447 128 HOH HOH . H 7 HOH A 110 448 129 HOH HOH . H 7 HOH A 111 449 130 HOH HOH . H 7 HOH A 112 450 131 HOH HOH . H 7 HOH A 113 451 132 HOH HOH . H 7 HOH A 114 452 133 HOH HOH . H 7 HOH A 115 453 134 HOH HOH . H 7 HOH A 116 454 135 HOH HOH . H 7 HOH A 117 455 136 HOH HOH . H 7 HOH A 118 456 137 HOH HOH . H 7 HOH A 119 457 138 HOH HOH . H 7 HOH A 120 458 139 HOH HOH . H 7 HOH A 121 459 140 HOH HOH . H 7 HOH A 122 460 141 HOH HOH . H 7 HOH A 123 461 142 HOH HOH . H 7 HOH A 124 462 143 HOH HOH . H 7 HOH A 125 463 144 HOH HOH . H 7 HOH A 126 464 145 HOH HOH . H 7 HOH A 127 465 146 HOH HOH . H 7 HOH A 128 466 148 HOH HOH . H 7 HOH A 129 467 149 HOH HOH . H 7 HOH A 130 468 150 HOH HOH . H 7 HOH A 131 469 151 HOH HOH . H 7 HOH A 132 470 152 HOH HOH . H 7 HOH A 133 471 153 HOH HOH . H 7 HOH A 134 472 154 HOH HOH . H 7 HOH A 135 473 155 HOH HOH . H 7 HOH A 136 474 156 HOH HOH . H 7 HOH A 137 475 157 HOH HOH . H 7 HOH A 138 476 160 HOH HOH . H 7 HOH A 139 477 161 HOH HOH . H 7 HOH A 140 478 162 HOH HOH . H 7 HOH A 141 479 163 HOH HOH . H 7 HOH A 142 480 164 HOH HOH . H 7 HOH A 143 481 165 HOH HOH . H 7 HOH A 144 482 166 HOH HOH . H 7 HOH A 145 483 167 HOH HOH . H 7 HOH A 146 484 168 HOH HOH . H 7 HOH A 147 485 169 HOH HOH . H 7 HOH A 148 486 170 HOH HOH . H 7 HOH A 149 487 171 HOH HOH . H 7 HOH A 150 488 172 HOH HOH . H 7 HOH A 151 489 173 HOH HOH . H 7 HOH A 152 490 174 HOH HOH . H 7 HOH A 153 491 175 HOH HOH . H 7 HOH A 154 492 176 HOH HOH . H 7 HOH A 155 493 177 HOH HOH . H 7 HOH A 156 494 178 HOH HOH . H 7 HOH A 157 495 179 HOH HOH . H 7 HOH A 158 496 180 HOH HOH . H 7 HOH A 159 497 181 HOH HOH . H 7 HOH A 160 498 182 HOH HOH . H 7 HOH A 161 499 183 HOH HOH . H 7 HOH A 162 500 184 HOH HOH . H 7 HOH A 163 501 185 HOH HOH . H 7 HOH A 164 502 186 HOH HOH . H 7 HOH A 165 503 187 HOH HOH . H 7 HOH A 166 504 188 HOH HOH . H 7 HOH A 167 505 189 HOH HOH . H 7 HOH A 168 506 190 HOH HOH . H 7 HOH A 169 507 192 HOH HOH . H 7 HOH A 170 508 193 HOH HOH . H 7 HOH A 171 509 194 HOH HOH . H 7 HOH A 172 510 195 HOH HOH . H 7 HOH A 173 511 196 HOH HOH . H 7 HOH A 174 512 197 HOH HOH . H 7 HOH A 175 513 198 HOH HOH . H 7 HOH A 176 514 199 HOH HOH . H 7 HOH A 177 515 200 HOH HOH . H 7 HOH A 178 516 201 HOH HOH . H 7 HOH A 179 517 202 HOH HOH . H 7 HOH A 180 518 203 HOH HOH . H 7 HOH A 181 519 204 HOH HOH . H 7 HOH A 182 520 205 HOH HOH . H 7 HOH A 183 521 206 HOH HOH . H 7 HOH A 184 522 207 HOH HOH . H 7 HOH A 185 523 208 HOH HOH . H 7 HOH A 186 524 209 HOH HOH . H 7 HOH A 187 525 210 HOH HOH . H 7 HOH A 188 526 211 HOH HOH . H 7 HOH A 189 527 212 HOH HOH . H 7 HOH A 190 528 213 HOH HOH . H 7 HOH A 191 529 214 HOH HOH . H 7 HOH A 192 530 215 HOH HOH . H 7 HOH A 193 531 216 HOH HOH . H 7 HOH A 194 532 217 HOH HOH . H 7 HOH A 195 533 218 HOH HOH . H 7 HOH A 196 534 219 HOH HOH . H 7 HOH A 197 535 220 HOH HOH . H 7 HOH A 198 536 221 HOH HOH . H 7 HOH A 199 537 222 HOH HOH . H 7 HOH A 200 538 223 HOH HOH . H 7 HOH A 201 539 224 HOH HOH . H 7 HOH A 202 540 225 HOH HOH . H 7 HOH A 203 541 226 HOH HOH . H 7 HOH A 204 542 227 HOH HOH . H 7 HOH A 205 543 228 HOH HOH . H 7 HOH A 206 544 229 HOH HOH . H 7 HOH A 207 545 230 HOH HOH . H 7 HOH A 208 546 231 HOH HOH . H 7 HOH A 209 547 232 HOH HOH . H 7 HOH A 210 548 233 HOH HOH . H 7 HOH A 211 549 234 HOH HOH . H 7 HOH A 212 550 235 HOH HOH . H 7 HOH A 213 551 236 HOH HOH . H 7 HOH A 214 552 237 HOH HOH . H 7 HOH A 215 553 238 HOH HOH . H 7 HOH A 216 554 239 HOH HOH . H 7 HOH A 217 555 240 HOH HOH . H 7 HOH A 218 556 241 HOH HOH . H 7 HOH A 219 557 242 HOH HOH . H 7 HOH A 220 558 243 HOH HOH . H 7 HOH A 221 559 244 HOH HOH . H 7 HOH A 222 560 245 HOH HOH . H 7 HOH A 223 561 246 HOH HOH . H 7 HOH A 224 562 247 HOH HOH . H 7 HOH A 225 563 248 HOH HOH . H 7 HOH A 226 564 249 HOH HOH . H 7 HOH A 227 565 250 HOH HOH . H 7 HOH A 228 566 251 HOH HOH . H 7 HOH A 229 567 252 HOH HOH . H 7 HOH A 230 568 253 HOH HOH . H 7 HOH A 231 569 254 HOH HOH . H 7 HOH A 232 570 255 HOH HOH . H 7 HOH A 233 571 256 HOH HOH . H 7 HOH A 234 572 257 HOH HOH . H 7 HOH A 235 573 258 HOH HOH . H 7 HOH A 236 574 259 HOH HOH . H 7 HOH A 237 575 260 HOH HOH . H 7 HOH A 238 576 261 HOH HOH . H 7 HOH A 239 577 262 HOH HOH . H 7 HOH A 240 578 263 HOH HOH . H 7 HOH A 241 579 264 HOH HOH . H 7 HOH A 242 580 265 HOH HOH . H 7 HOH A 243 581 266 HOH HOH . H 7 HOH A 244 582 267 HOH HOH . H 7 HOH A 245 583 268 HOH HOH . H 7 HOH A 246 584 269 HOH HOH . H 7 HOH A 247 585 270 HOH HOH . H 7 HOH A 248 586 271 HOH HOH . H 7 HOH A 249 587 272 HOH HOH . H 7 HOH A 250 588 273 HOH HOH . H 7 HOH A 251 589 274 HOH HOH . H 7 HOH A 252 590 275 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 5 -23.797 -4.469 -25.096 1 42.27 ? P PO4 336 A 1 HETATM 2 O O1 PO4 . . . E 5 -24.148 -3.466 -26.166 1 46.2 ? O1 PO4 336 A 1 HETATM 3 O O2 PO4 . . . E 5 -25.144 -4.902 -24.554 1 27.48 ? O2 PO4 336 A 1 HETATM 4 O O3 PO4 . . . E 5 -23.009 -5.712 -25.476 1 41.44 ? O3 PO4 336 A 1 HETATM 5 O O4 PO4 . . . E 5 -22.867 -3.742 -24.154 1 42.09 ? O4 PO4 336 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #