data_3RCB
#
_model_server_result.job_id            vJQYVTedgPOKn3QW8y56Tg 
_model_server_result.datetime_utc      '2024-11-26 01:00:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rcb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":335}' 
#
_entry.id    3RCB 
#
_exptl.entry_id    3RCB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3RCB 
_cell.length_a            72.371 
_cell.length_b            103.497 
_cell.length_c            145.154 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RCB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ARG 341 A ARG 323 1_555 D NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.866 ? 
metalc ? metalc2 A O THR 342 A THR 324 1_555 D NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc3 A O ALA 344 A ALA 326 1_555 D NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? 
metalc ? metalc4 A OD2 ASP 346 A ASP 328 1_555 D NA NA . A NA 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc5 D NA NA . A NA 335 1_555 H O HOH . A HOH 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3RCB 
_atom_sites.fract_transf_matrix[1][1]    0.013818 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009662 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006889 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 333 1 NAP NAP . 
C 3 CL A 1 334 1 CL CL . 
D 4 NA A 1 335 1 NA NA . 
E 5 PO4 A 1 336 1 PO4 PO4 . 
F 6 TLO A 1 337 301 TLO TLO . 
G 6 TLO A 1 338 301 TLO TLO . 
H 7 HOH A 1 339 1 HOH HOH . 
H 7 HOH A 2 340 2 HOH HOH . 
H 7 HOH A 3 341 3 HOH HOH . 
H 7 HOH A 4 342 5 HOH HOH . 
H 7 HOH A 5 343 6 HOH HOH . 
H 7 HOH A 6 344 7 HOH HOH . 
H 7 HOH A 7 345 8 HOH HOH . 
H 7 HOH A 8 346 9 HOH HOH . 
H 7 HOH A 9 347 10 HOH HOH . 
H 7 HOH A 10 348 11 HOH HOH . 
H 7 HOH A 11 349 12 HOH HOH . 
H 7 HOH A 12 350 13 HOH HOH . 
H 7 HOH A 13 351 14 HOH HOH . 
H 7 HOH A 14 352 15 HOH HOH . 
H 7 HOH A 15 353 17 HOH HOH . 
H 7 HOH A 16 354 18 HOH HOH . 
H 7 HOH A 17 355 19 HOH HOH . 
H 7 HOH A 18 356 20 HOH HOH . 
H 7 HOH A 19 357 21 HOH HOH . 
H 7 HOH A 20 358 22 HOH HOH . 
H 7 HOH A 21 359 25 HOH HOH . 
H 7 HOH A 22 360 27 HOH HOH . 
H 7 HOH A 23 361 29 HOH HOH . 
H 7 HOH A 24 362 30 HOH HOH . 
H 7 HOH A 25 363 31 HOH HOH . 
H 7 HOH A 26 364 32 HOH HOH . 
H 7 HOH A 27 365 33 HOH HOH . 
H 7 HOH A 28 366 34 HOH HOH . 
H 7 HOH A 29 367 35 HOH HOH . 
H 7 HOH A 30 368 36 HOH HOH . 
H 7 HOH A 31 369 37 HOH HOH . 
H 7 HOH A 32 370 38 HOH HOH . 
H 7 HOH A 33 371 40 HOH HOH . 
H 7 HOH A 34 372 41 HOH HOH . 
H 7 HOH A 35 373 42 HOH HOH . 
H 7 HOH A 36 374 43 HOH HOH . 
H 7 HOH A 37 375 44 HOH HOH . 
H 7 HOH A 38 376 45 HOH HOH . 
H 7 HOH A 39 377 46 HOH HOH . 
H 7 HOH A 40 378 47 HOH HOH . 
H 7 HOH A 41 379 48 HOH HOH . 
H 7 HOH A 42 380 50 HOH HOH . 
H 7 HOH A 43 381 51 HOH HOH . 
H 7 HOH A 44 382 52 HOH HOH . 
H 7 HOH A 45 383 54 HOH HOH . 
H 7 HOH A 46 384 57 HOH HOH . 
H 7 HOH A 47 385 59 HOH HOH . 
H 7 HOH A 48 386 60 HOH HOH . 
H 7 HOH A 49 387 61 HOH HOH . 
H 7 HOH A 50 388 63 HOH HOH . 
H 7 HOH A 51 389 64 HOH HOH . 
H 7 HOH A 52 390 65 HOH HOH . 
H 7 HOH A 53 391 67 HOH HOH . 
H 7 HOH A 54 392 68 HOH HOH . 
H 7 HOH A 55 393 69 HOH HOH . 
H 7 HOH A 56 394 70 HOH HOH . 
H 7 HOH A 57 395 71 HOH HOH . 
H 7 HOH A 58 396 74 HOH HOH . 
H 7 HOH A 59 397 76 HOH HOH . 
H 7 HOH A 60 398 77 HOH HOH . 
H 7 HOH A 61 399 78 HOH HOH . 
H 7 HOH A 62 400 79 HOH HOH . 
H 7 HOH A 63 401 80 HOH HOH . 
H 7 HOH A 64 402 81 HOH HOH . 
H 7 HOH A 65 403 82 HOH HOH . 
H 7 HOH A 66 404 83 HOH HOH . 
H 7 HOH A 67 405 84 HOH HOH . 
H 7 HOH A 68 406 86 HOH HOH . 
H 7 HOH A 69 407 87 HOH HOH . 
H 7 HOH A 70 408 89 HOH HOH . 
H 7 HOH A 71 409 90 HOH HOH . 
H 7 HOH A 72 410 91 HOH HOH . 
H 7 HOH A 73 411 93 HOH HOH . 
H 7 HOH A 74 412 94 HOH HOH . 
H 7 HOH A 75 413 97 HOH HOH . 
H 7 HOH A 76 414 98 HOH HOH . 
H 7 HOH A 77 415 100 HOH HOH . 
H 7 HOH A 78 416 102 HOH HOH . 
H 7 HOH A 79 417 103 HOH HOH . 
H 7 HOH A 80 418 104 HOH HOH . 
H 7 HOH A 81 419 105 HOH HOH . 
H 7 HOH A 82 420 107 HOH HOH . 
H 7 HOH A 83 421 110 HOH HOH . 
H 7 HOH A 84 422 114 HOH HOH . 
H 7 HOH A 85 423 115 HOH HOH . 
H 7 HOH A 86 424 116 HOH HOH . 
H 7 HOH A 87 425 117 HOH HOH . 
H 7 HOH A 88 426 118 HOH HOH . 
H 7 HOH A 89 427 119 HOH HOH . 
H 7 HOH A 90 428 120 HOH HOH . 
H 7 HOH A 91 429 122 HOH HOH . 
H 7 HOH A 92 430 123 HOH HOH . 
H 7 HOH A 93 431 125 HOH HOH . 
H 7 HOH A 94 432 127 HOH HOH . 
H 7 HOH A 95 433 129 HOH HOH . 
H 7 HOH A 96 434 130 HOH HOH . 
H 7 HOH A 97 435 132 HOH HOH . 
H 7 HOH A 98 436 134 HOH HOH . 
H 7 HOH A 99 437 135 HOH HOH . 
H 7 HOH A 100 438 136 HOH HOH . 
H 7 HOH A 101 439 137 HOH HOH . 
H 7 HOH A 102 440 138 HOH HOH . 
H 7 HOH A 103 441 139 HOH HOH . 
H 7 HOH A 104 442 144 HOH HOH . 
H 7 HOH A 105 443 152 HOH HOH . 
H 7 HOH A 106 444 156 HOH HOH . 
H 7 HOH A 107 445 162 HOH HOH . 
H 7 HOH A 108 446 165 HOH HOH . 
H 7 HOH A 109 447 169 HOH HOH . 
H 7 HOH A 110 448 171 HOH HOH . 
H 7 HOH A 111 449 172 HOH HOH . 
H 7 HOH A 112 450 173 HOH HOH . 
H 7 HOH A 113 451 174 HOH HOH . 
H 7 HOH A 114 452 175 HOH HOH . 
H 7 HOH A 115 453 177 HOH HOH . 
H 7 HOH A 116 454 179 HOH HOH . 
H 7 HOH A 117 455 180 HOH HOH . 
H 7 HOH A 118 456 181 HOH HOH . 
H 7 HOH A 119 457 182 HOH HOH . 
H 7 HOH A 120 458 184 HOH HOH . 
H 7 HOH A 121 459 185 HOH HOH . 
H 7 HOH A 122 460 186 HOH HOH . 
H 7 HOH A 123 461 189 HOH HOH . 
H 7 HOH A 124 462 190 HOH HOH . 
H 7 HOH A 125 463 191 HOH HOH . 
H 7 HOH A 126 464 192 HOH HOH . 
H 7 HOH A 127 465 193 HOH HOH . 
H 7 HOH A 128 466 194 HOH HOH . 
H 7 HOH A 129 467 195 HOH HOH . 
H 7 HOH A 130 468 196 HOH HOH . 
H 7 HOH A 131 469 198 HOH HOH . 
H 7 HOH A 132 470 199 HOH HOH . 
H 7 HOH A 133 471 200 HOH HOH . 
H 7 HOH A 134 472 201 HOH HOH . 
H 7 HOH A 135 473 202 HOH HOH . 
H 7 HOH A 136 474 203 HOH HOH . 
H 7 HOH A 137 475 204 HOH HOH . 
H 7 HOH A 138 476 205 HOH HOH . 
H 7 HOH A 139 477 206 HOH HOH . 
H 7 HOH A 140 478 207 HOH HOH . 
H 7 HOH A 141 479 208 HOH HOH . 
H 7 HOH A 142 480 209 HOH HOH . 
H 7 HOH A 143 481 210 HOH HOH . 
H 7 HOH A 144 482 211 HOH HOH . 
H 7 HOH A 145 483 212 HOH HOH . 
H 7 HOH A 146 484 213 HOH HOH . 
H 7 HOH A 147 485 214 HOH HOH . 
H 7 HOH A 148 486 215 HOH HOH . 
H 7 HOH A 149 487 216 HOH HOH . 
H 7 HOH A 150 488 217 HOH HOH . 
H 7 HOH A 151 489 218 HOH HOH . 
H 7 HOH A 152 490 219 HOH HOH . 
H 7 HOH A 153 491 220 HOH HOH . 
H 7 HOH A 154 492 221 HOH HOH . 
H 7 HOH A 155 493 222 HOH HOH . 
H 7 HOH A 156 494 223 HOH HOH . 
H 7 HOH A 157 495 224 HOH HOH . 
H 7 HOH A 158 496 225 HOH HOH . 
H 7 HOH A 159 497 226 HOH HOH . 
H 7 HOH A 160 498 227 HOH HOH . 
H 7 HOH A 161 499 228 HOH HOH . 
H 7 HOH A 162 500 229 HOH HOH . 
H 7 HOH A 163 501 230 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -42.245 
_atom_site.Cartn_y               -38.398 
_atom_site.Cartn_z               -8.606 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        6.87 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           335 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#