data_3RCM # _model_server_result.job_id 7I-jvORC4WpUGt5_l1RAEQ _model_server_result.datetime_utc '2024-10-13 19:19:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rcm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":289}' # _entry.id 3RCM # _exptl.entry_id 3RCM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RCM _cell.length_a 51.007 _cell.length_b 62.643 _cell.length_c 88.57 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RCM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 1 A MSE 1 1_555 A N GLN 2 A GLN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C GLN 33 A GLN 33 1_555 A N MSE 34 A MSE 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 A C MSE 34 A MSE 34 1_555 A N LEU 35 A LEU 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C LEU 204 A LEU 204 1_555 A N MSE 205 A MSE 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale5 A C MSE 205 A MSE 205 1_555 A N LEU 206 A LEU 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 A OE1 GLU 97 A GLU 97 1_555 B ZN ZN . A ZN 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.839 ? metalc ? metalc2 A NE2 HIS 158 A HIS 158 1_555 B ZN ZN . A ZN 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc3 A ND1 HIS 133 A HIS 133 1_555 B ZN ZN . A ZN 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc4 B ZN ZN . A ZN 288 1_555 C O4 CIT . A CIT 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3RCM _atom_sites.fract_transf_matrix[1][1] 0.019605 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015963 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 288 1 ZN ZN . C 3 CIT A 1 289 2 CIT CIT . D 4 ACT A 1 290 3 ACT ACT . E 5 HOH A 1 291 1 HOH HOH . E 5 HOH A 2 292 2 HOH HOH . E 5 HOH A 3 293 3 HOH HOH . E 5 HOH A 4 294 4 HOH HOH . E 5 HOH A 5 295 5 HOH HOH . E 5 HOH A 6 296 6 HOH HOH . E 5 HOH A 7 297 7 HOH HOH . E 5 HOH A 8 298 8 HOH HOH . E 5 HOH A 9 299 9 HOH HOH . E 5 HOH A 10 300 11 HOH HOH . E 5 HOH A 11 301 12 HOH HOH . E 5 HOH A 12 302 13 HOH HOH . E 5 HOH A 13 303 14 HOH HOH . E 5 HOH A 14 304 15 HOH HOH . E 5 HOH A 15 305 16 HOH HOH . E 5 HOH A 16 306 17 HOH HOH . E 5 HOH A 17 307 18 HOH HOH . E 5 HOH A 18 308 19 HOH HOH . E 5 HOH A 19 309 21 HOH HOH . E 5 HOH A 20 310 23 HOH HOH . E 5 HOH A 21 311 24 HOH HOH . E 5 HOH A 22 312 25 HOH HOH . E 5 HOH A 23 313 26 HOH HOH . E 5 HOH A 24 314 27 HOH HOH . E 5 HOH A 25 315 28 HOH HOH . E 5 HOH A 26 316 29 HOH HOH . E 5 HOH A 27 317 30 HOH HOH . E 5 HOH A 28 318 31 HOH HOH . E 5 HOH A 29 319 32 HOH HOH . E 5 HOH A 30 320 33 HOH HOH . E 5 HOH A 31 321 34 HOH HOH . E 5 HOH A 32 322 35 HOH HOH . E 5 HOH A 33 323 36 HOH HOH . E 5 HOH A 34 324 37 HOH HOH . E 5 HOH A 35 325 38 HOH HOH . E 5 HOH A 36 326 40 HOH HOH . E 5 HOH A 37 327 41 HOH HOH . E 5 HOH A 38 328 43 HOH HOH . E 5 HOH A 39 329 45 HOH HOH . E 5 HOH A 40 330 46 HOH HOH . E 5 HOH A 41 331 47 HOH HOH . E 5 HOH A 42 332 48 HOH HOH . E 5 HOH A 43 333 49 HOH HOH . E 5 HOH A 44 334 50 HOH HOH . E 5 HOH A 45 335 51 HOH HOH . E 5 HOH A 46 336 52 HOH HOH . E 5 HOH A 47 337 53 HOH HOH . E 5 HOH A 48 338 54 HOH HOH . E 5 HOH A 49 339 56 HOH HOH . E 5 HOH A 50 340 57 HOH HOH . E 5 HOH A 51 341 58 HOH HOH . E 5 HOH A 52 342 59 HOH HOH . E 5 HOH A 53 343 61 HOH HOH . E 5 HOH A 54 344 62 HOH HOH . E 5 HOH A 55 345 63 HOH HOH . E 5 HOH A 56 346 65 HOH HOH . E 5 HOH A 57 347 69 HOH HOH . E 5 HOH A 58 348 70 HOH HOH . E 5 HOH A 59 349 74 HOH HOH . E 5 HOH A 60 350 76 HOH HOH . E 5 HOH A 61 351 78 HOH HOH . E 5 HOH A 62 352 79 HOH HOH . E 5 HOH A 63 353 80 HOH HOH . E 5 HOH A 64 354 81 HOH HOH . E 5 HOH A 65 355 84 HOH HOH . E 5 HOH A 66 356 86 HOH HOH . E 5 HOH A 67 357 87 HOH HOH . E 5 HOH A 68 358 88 HOH HOH . E 5 HOH A 69 359 90 HOH HOH . E 5 HOH A 70 360 91 HOH HOH . E 5 HOH A 71 361 92 HOH HOH . E 5 HOH A 72 362 93 HOH HOH . E 5 HOH A 73 363 94 HOH HOH . E 5 HOH A 74 364 95 HOH HOH . E 5 HOH A 75 365 96 HOH HOH . E 5 HOH A 76 366 98 HOH HOH . E 5 HOH A 77 367 99 HOH HOH . E 5 HOH A 78 368 100 HOH HOH . E 5 HOH A 79 369 101 HOH HOH . E 5 HOH A 80 370 104 HOH HOH . E 5 HOH A 81 371 108 HOH HOH . E 5 HOH A 82 372 111 HOH HOH . E 5 HOH A 83 373 112 HOH HOH . E 5 HOH A 84 374 113 HOH HOH . E 5 HOH A 85 375 114 HOH HOH . E 5 HOH A 86 376 115 HOH HOH . E 5 HOH A 87 377 116 HOH HOH . E 5 HOH A 88 378 118 HOH HOH . E 5 HOH A 89 379 126 HOH HOH . E 5 HOH A 90 380 128 HOH HOH . E 5 HOH A 91 381 130 HOH HOH . E 5 HOH A 92 382 133 HOH HOH . E 5 HOH A 93 383 134 HOH HOH . E 5 HOH A 94 384 135 HOH HOH . E 5 HOH A 95 385 136 HOH HOH . E 5 HOH A 96 386 137 HOH HOH . E 5 HOH A 97 387 138 HOH HOH . E 5 HOH A 98 388 143 HOH HOH . E 5 HOH A 99 389 146 HOH HOH . E 5 HOH A 100 390 147 HOH HOH . E 5 HOH A 101 391 148 HOH HOH . E 5 HOH A 102 392 149 HOH HOH . E 5 HOH A 103 393 151 HOH HOH . E 5 HOH A 104 394 152 HOH HOH . E 5 HOH A 105 395 154 HOH HOH . E 5 HOH A 106 396 164 HOH HOH . E 5 HOH A 107 397 169 HOH HOH . E 5 HOH A 108 398 170 HOH HOH . E 5 HOH A 109 399 171 HOH HOH . E 5 HOH A 110 400 172 HOH HOH . E 5 HOH A 111 401 173 HOH HOH . E 5 HOH A 112 402 174 HOH HOH . E 5 HOH A 113 403 176 HOH HOH . E 5 HOH A 114 404 178 HOH HOH . E 5 HOH A 115 405 182 HOH HOH . E 5 HOH A 116 406 190 HOH HOH . E 5 HOH A 117 407 195 HOH HOH . E 5 HOH A 118 408 202 HOH HOH . E 5 HOH A 119 409 1 HOH HOH . E 5 HOH A 120 410 3 HOH HOH . E 5 HOH A 121 411 4 HOH HOH . E 5 HOH A 122 412 5 HOH HOH . E 5 HOH A 123 413 1 HOH HOH . E 5 HOH A 124 414 2 HOH HOH . E 5 HOH A 125 415 3 HOH HOH . E 5 HOH A 126 416 1 HOH HOH . E 5 HOH A 127 417 1 HOH HOH . E 5 HOH A 128 418 2 HOH HOH . E 5 HOH A 129 419 3 HOH HOH . E 5 HOH A 130 420 4 HOH HOH . E 5 HOH A 131 421 5 HOH HOH . E 5 HOH A 132 422 6 HOH HOH . E 5 HOH A 133 423 7 HOH HOH . E 5 HOH A 134 424 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . C 3 22.174 49.553 67.281 1 57.3 ? C1 CIT 289 A 1 HETATM 2 O O1 CIT . . . C 3 22.47 50.268 68.284 1 59.56 ? O1 CIT 289 A 1 HETATM 3 O O2 CIT . . . C 3 21.385 49.989 66.401 1 57.62 ? O2 CIT 289 A 1 HETATM 4 C C2 CIT . . . C 3 22.762 48.163 67.124 1 53.75 ? C2 CIT 289 A 1 HETATM 5 C C3 CIT . . . C 3 21.682 47.082 67.018 1 49.84 ? C3 CIT 289 A 1 HETATM 6 O O7 CIT . . . C 3 22.243 45.804 67.425 1 51.89 ? O7 CIT 289 A 1 HETATM 7 C C4 CIT . . . C 3 21.189 46.966 65.568 1 44.2 ? C4 CIT 289 A 1 HETATM 8 C C5 CIT . . . C 3 19.742 46.505 65.483 1 41.09 ? C5 CIT 289 A 1 HETATM 9 O O3 CIT . . . C 3 18.828 47.355 65.303 1 39.33 ? O3 CIT 289 A 1 HETATM 10 O O4 CIT . . . C 3 19.447 45.281 65.584 1 28.43 ? O4 CIT 289 A 1 HETATM 11 C C6 CIT . . . C 3 20.549 47.392 67.983 1 49.8 ? C6 CIT 289 A 1 HETATM 12 O O5 CIT . . . C 3 20.101 46.484 68.717 1 52.49 ? O5 CIT 289 A 1 HETATM 13 O O6 CIT . . . C 3 20.045 48.542 68.06 1 52.49 ? O6 CIT 289 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #