data_3RCN
#
_model_server_result.job_id            IUxs1Sb7oVI0cAl-PQAPxw 
_model_server_result.datetime_utc      '2024-11-05 04:47:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rcn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":561}' 
#
_entry.id    3RCN 
#
_exptl.entry_id    3RCN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3RCN 
_cell.length_a            74.003 
_cell.length_b            74.003 
_cell.length_c            409.212 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RCN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+5/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 37.0015 64.088478 341.01 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 4 A MSE 1 1_555 A N SER 5 A SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale2 A C THR 143 A THR 140 1_555 A N MSE 144 A MSE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale3 A C MSE 144 A MSE 141 1_555 A N LEU 145 A LEU 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? 
covale ? covale4 A C PHE 151 A PHE 148 1_555 A N MSE 152 A MSE 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale5 A C MSE 152 A MSE 149 1_555 A N PRO 153 A PRO 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale6 A C VAL 163 A VAL 160 1_555 A N MSE 164 A MSE 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale7 A C MSE 164 A MSE 161 1_555 A N ALA 165 A ALA 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale8 A C ALA 165 A ALA 162 1_555 A N MSE 166 A MSE 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale9 A C MSE 166 A MSE 163 1_555 A N HIS 167 A HIS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale10 A C ARG 183 A ARG 180 1_555 A N MSE 184 A MSE 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale11 A C MSE 184 A MSE 181 1_555 A N GLN 185 A GLN 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale12 A C VAL 399 A VAL 396 1_555 A N MSE 400 A MSE 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale13 A C MSE 400 A MSE 397 1_555 A N CYS 401 A CYS 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale14 A C ALA 508 A ALA 505 1_555 A N MSE 509 A MSE 506 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.33 ? 
covale ? covale15 A C ALA 508 A ALA 505 1_555 A N MSE 509 A MSE 506 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.329 ? 
covale ? covale16 A C MSE 509 A MSE 506 1_555 A N GLY 510 A GLY 507 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale17 A C MSE 509 A MSE 506 1_555 A N GLY 510 A GLY 507 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.327 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
_atom_sites.entry_id                     3RCN 
_atom_sites.fract_transf_matrix[1][1]    0.013513 
_atom_sites.fract_transf_matrix[1][2]    0.007802 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015603 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002444 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 551 551 SO4 SO4 . 
C 2 SO4 A 1 553 553 SO4 SO4 . 
D 2 SO4 A 1 554 554 SO4 SO4 . 
E 3 ACY A 1 555 555 ACY ACY . 
F 4 GOL A 1 556 556 GOL GOL . 
G 2 SO4 A 1 557 557 SO4 SO4 . 
H 2 SO4 A 1 558 558 SO4 SO4 . 
I 2 SO4 A 1 559 559 SO4 SO4 . 
J 4 GOL A 1 560 560 GOL GOL . 
K 4 GOL A 1 561 561 GOL GOL . 
L 4 GOL A 1 562 562 GOL GOL . 
M 4 GOL A 1 563 563 GOL GOL . 
N 4 GOL A 1 564 564 GOL GOL . 
O 4 GOL A 1 565 565 GOL GOL . 
P 5 HOH A 1 541 1 HOH HOH . 
P 5 HOH A 2 542 2 HOH HOH . 
P 5 HOH A 3 543 3 HOH HOH . 
P 5 HOH A 4 544 4 HOH HOH . 
P 5 HOH A 5 545 5 HOH HOH . 
P 5 HOH A 6 546 6 HOH HOH . 
P 5 HOH A 7 547 7 HOH HOH . 
P 5 HOH A 8 548 8 HOH HOH . 
P 5 HOH A 9 549 9 HOH HOH . 
P 5 HOH A 10 550 10 HOH HOH . 
P 5 HOH A 11 552 11 HOH HOH . 
P 5 HOH A 12 566 12 HOH HOH . 
P 5 HOH A 13 567 13 HOH HOH . 
P 5 HOH A 14 568 14 HOH HOH . 
P 5 HOH A 15 569 15 HOH HOH . 
P 5 HOH A 16 570 16 HOH HOH . 
P 5 HOH A 17 571 17 HOH HOH . 
P 5 HOH A 18 572 18 HOH HOH . 
P 5 HOH A 19 573 19 HOH HOH . 
P 5 HOH A 20 574 20 HOH HOH . 
P 5 HOH A 21 575 21 HOH HOH . 
P 5 HOH A 22 576 22 HOH HOH . 
P 5 HOH A 23 577 23 HOH HOH . 
P 5 HOH A 24 578 24 HOH HOH . 
P 5 HOH A 25 579 25 HOH HOH . 
P 5 HOH A 26 580 26 HOH HOH . 
P 5 HOH A 27 581 27 HOH HOH . 
P 5 HOH A 28 582 28 HOH HOH . 
P 5 HOH A 29 583 29 HOH HOH . 
P 5 HOH A 30 584 30 HOH HOH . 
P 5 HOH A 31 585 31 HOH HOH . 
P 5 HOH A 32 586 32 HOH HOH . 
P 5 HOH A 33 587 33 HOH HOH . 
P 5 HOH A 34 588 34 HOH HOH . 
P 5 HOH A 35 589 35 HOH HOH . 
P 5 HOH A 36 590 36 HOH HOH . 
P 5 HOH A 37 591 37 HOH HOH . 
P 5 HOH A 38 592 38 HOH HOH . 
P 5 HOH A 39 593 39 HOH HOH . 
P 5 HOH A 40 594 40 HOH HOH . 
P 5 HOH A 41 595 41 HOH HOH . 
P 5 HOH A 42 596 42 HOH HOH . 
P 5 HOH A 43 597 43 HOH HOH . 
P 5 HOH A 44 598 44 HOH HOH . 
P 5 HOH A 45 599 45 HOH HOH . 
P 5 HOH A 46 600 46 HOH HOH . 
P 5 HOH A 47 601 47 HOH HOH . 
P 5 HOH A 48 602 48 HOH HOH . 
P 5 HOH A 49 603 49 HOH HOH . 
P 5 HOH A 50 604 50 HOH HOH . 
P 5 HOH A 51 605 51 HOH HOH . 
P 5 HOH A 52 606 52 HOH HOH . 
P 5 HOH A 53 607 53 HOH HOH . 
P 5 HOH A 54 608 54 HOH HOH . 
P 5 HOH A 55 609 55 HOH HOH . 
P 5 HOH A 56 610 56 HOH HOH . 
P 5 HOH A 57 611 57 HOH HOH . 
P 5 HOH A 58 612 58 HOH HOH . 
P 5 HOH A 59 613 59 HOH HOH . 
P 5 HOH A 60 614 60 HOH HOH . 
P 5 HOH A 61 615 61 HOH HOH . 
P 5 HOH A 62 616 62 HOH HOH . 
P 5 HOH A 63 617 63 HOH HOH . 
P 5 HOH A 64 618 64 HOH HOH . 
P 5 HOH A 65 619 65 HOH HOH . 
P 5 HOH A 66 620 66 HOH HOH . 
P 5 HOH A 67 621 67 HOH HOH . 
P 5 HOH A 68 622 68 HOH HOH . 
P 5 HOH A 69 623 69 HOH HOH . 
P 5 HOH A 70 624 70 HOH HOH . 
P 5 HOH A 71 625 71 HOH HOH . 
P 5 HOH A 72 626 72 HOH HOH . 
P 5 HOH A 73 627 73 HOH HOH . 
P 5 HOH A 74 628 74 HOH HOH . 
P 5 HOH A 75 629 75 HOH HOH . 
P 5 HOH A 76 630 76 HOH HOH . 
P 5 HOH A 77 631 77 HOH HOH . 
P 5 HOH A 78 632 78 HOH HOH . 
P 5 HOH A 79 633 79 HOH HOH . 
P 5 HOH A 80 634 80 HOH HOH . 
P 5 HOH A 81 635 81 HOH HOH . 
P 5 HOH A 82 636 82 HOH HOH . 
P 5 HOH A 83 637 83 HOH HOH . 
P 5 HOH A 84 638 84 HOH HOH . 
P 5 HOH A 85 639 85 HOH HOH . 
P 5 HOH A 86 640 86 HOH HOH . 
P 5 HOH A 87 641 87 HOH HOH . 
P 5 HOH A 88 642 88 HOH HOH . 
P 5 HOH A 89 643 89 HOH HOH . 
P 5 HOH A 90 644 90 HOH HOH . 
P 5 HOH A 91 645 91 HOH HOH . 
P 5 HOH A 92 646 92 HOH HOH . 
P 5 HOH A 93 647 93 HOH HOH . 
P 5 HOH A 94 648 94 HOH HOH . 
P 5 HOH A 95 649 95 HOH HOH . 
P 5 HOH A 96 650 96 HOH HOH . 
P 5 HOH A 97 651 97 HOH HOH . 
P 5 HOH A 98 652 98 HOH HOH . 
P 5 HOH A 99 653 99 HOH HOH . 
P 5 HOH A 100 654 100 HOH HOH . 
P 5 HOH A 101 655 101 HOH HOH . 
P 5 HOH A 102 656 102 HOH HOH . 
P 5 HOH A 103 657 103 HOH HOH . 
P 5 HOH A 104 658 104 HOH HOH . 
P 5 HOH A 105 659 105 HOH HOH . 
P 5 HOH A 106 660 106 HOH HOH . 
P 5 HOH A 107 661 107 HOH HOH . 
P 5 HOH A 108 662 108 HOH HOH . 
P 5 HOH A 109 663 109 HOH HOH . 
P 5 HOH A 110 664 110 HOH HOH . 
P 5 HOH A 111 665 111 HOH HOH . 
P 5 HOH A 112 666 112 HOH HOH . 
P 5 HOH A 113 667 113 HOH HOH . 
P 5 HOH A 114 668 114 HOH HOH . 
P 5 HOH A 115 669 115 HOH HOH . 
P 5 HOH A 116 670 116 HOH HOH . 
P 5 HOH A 117 671 117 HOH HOH . 
P 5 HOH A 118 672 118 HOH HOH . 
P 5 HOH A 119 673 119 HOH HOH . 
P 5 HOH A 120 674 120 HOH HOH . 
P 5 HOH A 121 675 121 HOH HOH . 
P 5 HOH A 122 676 122 HOH HOH . 
P 5 HOH A 123 677 123 HOH HOH . 
P 5 HOH A 124 678 124 HOH HOH . 
P 5 HOH A 125 679 125 HOH HOH . 
P 5 HOH A 126 680 126 HOH HOH . 
P 5 HOH A 127 681 127 HOH HOH . 
P 5 HOH A 128 682 128 HOH HOH . 
P 5 HOH A 129 683 129 HOH HOH . 
P 5 HOH A 130 684 130 HOH HOH . 
P 5 HOH A 131 685 131 HOH HOH . 
P 5 HOH A 132 686 132 HOH HOH . 
P 5 HOH A 133 687 133 HOH HOH . 
P 5 HOH A 134 688 134 HOH HOH . 
P 5 HOH A 135 689 135 HOH HOH . 
P 5 HOH A 136 690 136 HOH HOH . 
P 5 HOH A 137 691 137 HOH HOH . 
P 5 HOH A 138 692 138 HOH HOH . 
P 5 HOH A 139 693 139 HOH HOH . 
P 5 HOH A 140 694 140 HOH HOH . 
P 5 HOH A 141 695 141 HOH HOH . 
P 5 HOH A 142 696 142 HOH HOH . 
P 5 HOH A 143 697 143 HOH HOH . 
P 5 HOH A 144 698 144 HOH HOH . 
P 5 HOH A 145 699 145 HOH HOH . 
P 5 HOH A 146 700 146 HOH HOH . 
P 5 HOH A 147 701 147 HOH HOH . 
P 5 HOH A 148 702 148 HOH HOH . 
P 5 HOH A 149 703 149 HOH HOH . 
P 5 HOH A 150 704 150 HOH HOH . 
P 5 HOH A 151 705 151 HOH HOH . 
P 5 HOH A 152 706 152 HOH HOH . 
P 5 HOH A 153 707 153 HOH HOH . 
P 5 HOH A 154 708 154 HOH HOH . 
P 5 HOH A 155 709 155 HOH HOH . 
P 5 HOH A 156 710 156 HOH HOH . 
P 5 HOH A 157 711 157 HOH HOH . 
P 5 HOH A 158 712 158 HOH HOH . 
P 5 HOH A 159 713 159 HOH HOH . 
P 5 HOH A 160 714 160 HOH HOH . 
P 5 HOH A 161 715 161 HOH HOH . 
P 5 HOH A 162 716 162 HOH HOH . 
P 5 HOH A 163 717 163 HOH HOH . 
P 5 HOH A 164 718 164 HOH HOH . 
P 5 HOH A 165 719 165 HOH HOH . 
P 5 HOH A 166 720 166 HOH HOH . 
P 5 HOH A 167 721 167 HOH HOH . 
P 5 HOH A 168 722 168 HOH HOH . 
P 5 HOH A 169 723 169 HOH HOH . 
P 5 HOH A 170 724 170 HOH HOH . 
P 5 HOH A 171 725 171 HOH HOH . 
P 5 HOH A 172 726 172 HOH HOH . 
P 5 HOH A 173 727 173 HOH HOH . 
P 5 HOH A 174 728 174 HOH HOH . 
P 5 HOH A 175 729 175 HOH HOH . 
P 5 HOH A 176 730 176 HOH HOH . 
P 5 HOH A 177 731 177 HOH HOH . 
P 5 HOH A 178 732 178 HOH HOH . 
P 5 HOH A 179 733 179 HOH HOH . 
P 5 HOH A 180 734 180 HOH HOH . 
P 5 HOH A 181 735 181 HOH HOH . 
P 5 HOH A 182 736 182 HOH HOH . 
P 5 HOH A 183 737 183 HOH HOH . 
P 5 HOH A 184 738 184 HOH HOH . 
P 5 HOH A 185 739 185 HOH HOH . 
P 5 HOH A 186 740 186 HOH HOH . 
P 5 HOH A 187 741 187 HOH HOH . 
P 5 HOH A 188 742 188 HOH HOH . 
P 5 HOH A 189 743 189 HOH HOH . 
P 5 HOH A 190 744 190 HOH HOH . 
P 5 HOH A 191 745 191 HOH HOH . 
P 5 HOH A 192 746 192 HOH HOH . 
P 5 HOH A 193 747 193 HOH HOH . 
P 5 HOH A 194 748 194 HOH HOH . 
P 5 HOH A 195 749 195 HOH HOH . 
P 5 HOH A 196 750 196 HOH HOH . 
P 5 HOH A 197 751 197 HOH HOH . 
P 5 HOH A 198 752 198 HOH HOH . 
P 5 HOH A 199 753 199 HOH HOH . 
P 5 HOH A 200 754 200 HOH HOH . 
P 5 HOH A 201 755 201 HOH HOH . 
P 5 HOH A 202 756 202 HOH HOH . 
P 5 HOH A 203 757 203 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . K 4 51.353 17.808 191.072 1 65.76 ? C1 GOL 561 A 1 
HETATM 2 O O1 GOL . . . K 4 51.415 16.652 190.259 1 60.86 ? O1 GOL 561 A 1 
HETATM 3 C C2 GOL . . . K 4 52.293 18.903 190.561 1 66.81 ? C2 GOL 561 A 1 
HETATM 4 O O2 GOL . . . K 4 51.831 20.177 190.959 1 63.54 ? O2 GOL 561 A 1 
HETATM 5 C C3 GOL . . . K 4 52.465 18.825 189.042 1 70.7 ? C3 GOL 561 A 1 
HETATM 6 O O3 GOL . . . K 4 52.56 20.11 188.456 1 69.42 ? O3 GOL 561 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#