data_3RCW # _model_server_result.job_id vuxLg92rysUFPzexw4QkGw _model_server_result.datetime_utc '2024-11-05 21:19:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rcw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1}' # _entry.id 3RCW # _exptl.entry_id 3RCW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 99.131 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-methylpyrrolidin-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 100.61 _cell.angle_beta 90.75 _cell.angle_gamma 93.89 _cell.entry_id 3RCW _cell.length_a 43.137 _cell.length_b 51.245 _cell.length_c 130.626 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RCW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 ? monomeric 1 author_defined_assembly 7 ? monomeric 1 author_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,N 1 1 B,O 2 1 C,I,P 3 1 D,J,Q 4 1 E,R 5 1 F,K,S 6 1 G,L,T 7 1 H,M,U 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H9 N O' _chem_comp.formula_weight 99.131 _chem_comp.id MB3 _chem_comp.mon_nstd_flag . _chem_comp.name 1-methylpyrrolidin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA NAG MB3 sing 233 n n CAA HAA MB3 sing 234 n n CAA HAAA MB3 sing 235 n n CAA HAAB MB3 sing 236 n n CAF OAB MB3 doub 237 n n CAE CAC MB3 sing 238 n n CAC CAD MB3 sing 239 n n CAC HAC MB3 sing 240 n n CAC HACA MB3 sing 241 n n CAF CAD MB3 sing 242 n n CAD HAD MB3 sing 243 n n CAD HADA MB3 sing 244 n n NAG CAE MB3 sing 245 n n CAE HAE MB3 sing 246 n n CAE HAEA MB3 sing 247 n n NAG CAF MB3 sing 248 n n # _atom_sites.entry_id 3RCW _atom_sites.fract_transf_matrix[1][1] 0.023182 _atom_sites.fract_transf_matrix[1][2] 0.001576 _atom_sites.fract_transf_matrix[1][3] 0.000606 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019559 _atom_sites.fract_transf_matrix[2][3] 0.00369 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 MB3 C 1 1 1 MB3 DRG . J 3 ACT D 1 1 1 ACT ACT . K 4 EDO F 1 2 2 EDO EDO . L 4 EDO G 1 1 1 EDO EDO . M 3 ACT H 1 2 2 ACT ACT . N 5 HOH A 1 4 4 HOH HOH . N 5 HOH A 2 12 12 HOH HOH . N 5 HOH A 3 14 14 HOH HOH . N 5 HOH A 4 15 15 HOH HOH . N 5 HOH A 5 18 18 HOH HOH . N 5 HOH A 6 26 26 HOH HOH . N 5 HOH A 7 28 28 HOH HOH . N 5 HOH A 8 42 42 HOH HOH . N 5 HOH A 9 53 53 HOH HOH . N 5 HOH A 10 56 56 HOH HOH . N 5 HOH A 11 58 58 HOH HOH . N 5 HOH A 12 60 60 HOH HOH . N 5 HOH A 13 61 61 HOH HOH . N 5 HOH A 14 62 62 HOH HOH . N 5 HOH A 15 102 102 HOH HOH . N 5 HOH A 16 103 103 HOH HOH . N 5 HOH A 17 104 104 HOH HOH . N 5 HOH A 18 105 105 HOH HOH . N 5 HOH A 19 123 123 HOH HOH . N 5 HOH A 20 126 126 HOH HOH . N 5 HOH A 21 129 129 HOH HOH . N 5 HOH A 22 130 130 HOH HOH . N 5 HOH A 23 136 136 HOH HOH . N 5 HOH A 24 139 139 HOH HOH . N 5 HOH A 25 140 140 HOH HOH . N 5 HOH A 26 160 160 HOH HOH . O 5 HOH B 1 3 3 HOH HOH . O 5 HOH B 2 8 8 HOH HOH . O 5 HOH B 3 24 24 HOH HOH . O 5 HOH B 4 36 36 HOH HOH . O 5 HOH B 5 40 40 HOH HOH . O 5 HOH B 6 46 46 HOH HOH . O 5 HOH B 7 63 63 HOH HOH . O 5 HOH B 8 64 64 HOH HOH . O 5 HOH B 9 65 65 HOH HOH . O 5 HOH B 10 66 66 HOH HOH . O 5 HOH B 11 67 67 HOH HOH . O 5 HOH B 12 68 68 HOH HOH . O 5 HOH B 13 69 69 HOH HOH . O 5 HOH B 14 97 97 HOH HOH . O 5 HOH B 15 106 106 HOH HOH . O 5 HOH B 16 141 141 HOH HOH . O 5 HOH B 17 142 142 HOH HOH . O 5 HOH B 18 172 172 HOH HOH . P 5 HOH C 1 30 30 HOH HOH . P 5 HOH C 2 38 38 HOH HOH . P 5 HOH C 3 45 45 HOH HOH . P 5 HOH C 4 71 71 HOH HOH . P 5 HOH C 5 72 72 HOH HOH . P 5 HOH C 6 73 73 HOH HOH . P 5 HOH C 7 74 74 HOH HOH . P 5 HOH C 8 109 109 HOH HOH . P 5 HOH C 9 110 110 HOH HOH . P 5 HOH C 10 111 111 HOH HOH . P 5 HOH C 11 113 113 HOH HOH . P 5 HOH C 12 114 114 HOH HOH . P 5 HOH C 13 115 115 HOH HOH . P 5 HOH C 14 116 116 HOH HOH . P 5 HOH C 15 117 117 HOH HOH . P 5 HOH C 16 118 118 HOH HOH . P 5 HOH C 17 119 119 HOH HOH . P 5 HOH C 18 121 121 HOH HOH . P 5 HOH C 19 128 128 HOH HOH . P 5 HOH C 20 132 132 HOH HOH . P 5 HOH C 21 170 170 HOH HOH . P 5 HOH C 22 689 1 HOH HOH . Q 5 HOH D 1 5 5 HOH HOH . Q 5 HOH D 2 6 6 HOH HOH . Q 5 HOH D 3 11 11 HOH HOH . Q 5 HOH D 4 16 16 HOH HOH . Q 5 HOH D 5 20 20 HOH HOH . Q 5 HOH D 6 23 23 HOH HOH . Q 5 HOH D 7 25 25 HOH HOH . Q 5 HOH D 8 27 27 HOH HOH . Q 5 HOH D 9 33 33 HOH HOH . Q 5 HOH D 10 50 50 HOH HOH . Q 5 HOH D 11 51 51 HOH HOH . Q 5 HOH D 12 75 75 HOH HOH . Q 5 HOH D 13 76 76 HOH HOH . Q 5 HOH D 14 77 77 HOH HOH . Q 5 HOH D 15 78 78 HOH HOH . Q 5 HOH D 16 79 79 HOH HOH . Q 5 HOH D 17 80 80 HOH HOH . Q 5 HOH D 18 81 81 HOH HOH . Q 5 HOH D 19 133 133 HOH HOH . Q 5 HOH D 20 143 143 HOH HOH . Q 5 HOH D 21 144 144 HOH HOH . Q 5 HOH D 22 145 145 HOH HOH . Q 5 HOH D 23 146 146 HOH HOH . Q 5 HOH D 24 147 147 HOH HOH . Q 5 HOH D 25 159 159 HOH HOH . Q 5 HOH D 26 162 162 HOH HOH . Q 5 HOH D 27 163 163 HOH HOH . Q 5 HOH D 28 171 171 HOH HOH . R 5 HOH E 1 21 21 HOH HOH . R 5 HOH E 2 22 22 HOH HOH . R 5 HOH E 3 32 32 HOH HOH . R 5 HOH E 4 82 82 HOH HOH . R 5 HOH E 5 83 83 HOH HOH . R 5 HOH E 6 84 84 HOH HOH . R 5 HOH E 7 85 85 HOH HOH . R 5 HOH E 8 86 86 HOH HOH . R 5 HOH E 9 87 87 HOH HOH . R 5 HOH E 10 120 120 HOH HOH . R 5 HOH E 11 127 127 HOH HOH . R 5 HOH E 12 131 131 HOH HOH . R 5 HOH E 13 134 134 HOH HOH . R 5 HOH E 14 135 135 HOH HOH . R 5 HOH E 15 148 148 HOH HOH . R 5 HOH E 16 149 149 HOH HOH . R 5 HOH E 17 150 150 HOH HOH . R 5 HOH E 18 164 164 HOH HOH . R 5 HOH E 19 166 166 HOH HOH . S 5 HOH F 1 17 17 HOH HOH . S 5 HOH F 2 29 29 HOH HOH . S 5 HOH F 3 31 31 HOH HOH . S 5 HOH F 4 34 34 HOH HOH . S 5 HOH F 5 57 57 HOH HOH . S 5 HOH F 6 88 88 HOH HOH . S 5 HOH F 7 89 89 HOH HOH . S 5 HOH F 8 90 90 HOH HOH . S 5 HOH F 9 152 152 HOH HOH . S 5 HOH F 10 153 153 HOH HOH . S 5 HOH F 11 154 154 HOH HOH . S 5 HOH F 12 155 155 HOH HOH . S 5 HOH F 13 156 156 HOH HOH . S 5 HOH F 14 161 161 HOH HOH . S 5 HOH F 15 168 168 HOH HOH . S 5 HOH F 16 169 169 HOH HOH . S 5 HOH F 17 173 173 HOH HOH . T 5 HOH G 1 2 2 HOH HOH . T 5 HOH G 2 9 9 HOH HOH . T 5 HOH G 3 10 10 HOH HOH . T 5 HOH G 4 13 13 HOH HOH . T 5 HOH G 5 19 19 HOH HOH . T 5 HOH G 6 35 35 HOH HOH . T 5 HOH G 7 41 41 HOH HOH . T 5 HOH G 8 43 43 HOH HOH . T 5 HOH G 9 44 44 HOH HOH . T 5 HOH G 10 52 52 HOH HOH . T 5 HOH G 11 55 55 HOH HOH . T 5 HOH G 12 59 59 HOH HOH . T 5 HOH G 13 91 91 HOH HOH . T 5 HOH G 14 92 92 HOH HOH . T 5 HOH G 15 93 93 HOH HOH . T 5 HOH G 16 94 94 HOH HOH . T 5 HOH G 17 95 95 HOH HOH . T 5 HOH G 18 112 112 HOH HOH . T 5 HOH G 19 122 122 HOH HOH . T 5 HOH G 20 124 124 HOH HOH . T 5 HOH G 21 125 125 HOH HOH . T 5 HOH G 22 157 157 HOH HOH . T 5 HOH G 23 165 165 HOH HOH . T 5 HOH G 24 167 167 HOH HOH . U 5 HOH H 1 7 7 HOH HOH . U 5 HOH H 2 37 37 HOH HOH . U 5 HOH H 3 48 48 HOH HOH . U 5 HOH H 4 49 49 HOH HOH . U 5 HOH H 5 96 96 HOH HOH . U 5 HOH H 6 98 98 HOH HOH . U 5 HOH H 7 99 99 HOH HOH . U 5 HOH H 8 100 100 HOH HOH . U 5 HOH H 9 101 101 HOH HOH . U 5 HOH H 10 137 137 HOH HOH . U 5 HOH H 11 138 138 HOH HOH . U 5 HOH H 12 158 158 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA MB3 . . . I 2 -0.341 -22.369 130.495 1 30.41 ? CAA MB3 1 C 1 HETATM 2 O OAB MB3 . . . I 2 -3.137 -22.345 130.544 1 54.19 ? OAB MB3 1 C 1 HETATM 3 C CAC MB3 . . . I 2 -2.171 -25.775 130.132 1 57.12 ? CAC MB3 1 C 1 HETATM 4 C CAD MB3 . . . I 2 -3.3 -24.796 130.484 1 45.3 ? CAD MB3 1 C 1 HETATM 5 C CAE MB3 . . . I 2 -0.87 -24.978 130.407 1 59.78 ? CAE MB3 1 C 1 HETATM 6 C CAF MB3 . . . I 2 -2.588 -23.442 130.522 1 41.66 ? CAF MB3 1 C 1 HETATM 7 N NAG MB3 . . . I 2 -1.263 -23.561 130.487 1 49.37 ? NAG MB3 1 C 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 207 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #