data_3RDU
#
_model_server_result.job_id            MVTRxTmaL97NVSko9fB05w 
_model_server_result.datetime_utc      '2024-11-18 08:55:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rdu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":700}' 
#
_entry.id    3RDU 
#
_exptl.entry_id    3RDU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.278 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PENTAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3RDU 
_cell.length_a            57.354 
_cell.length_b            57.354 
_cell.length_c            76.839 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RDU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA tetrameric 4 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
4 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H22 O6' 
_chem_comp.formula_weight    238.278 
_chem_comp.id                1PE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PENTAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     PEG400 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH2 C12 1PE sing 1 n n 
OH2 HO2 1PE sing 2 n n 
C12 C22 1PE sing 3 n n 
C12 H121 1PE sing 4 n n 
C12 H122 1PE sing 5 n n 
C22 OH3 1PE sing 6 n n 
C22 H221 1PE sing 7 n n 
C22 H222 1PE sing 8 n n 
OH3 C23 1PE sing 9 n n 
C13 C23 1PE sing 10 n n 
C13 OH4 1PE sing 11 n n 
C13 H131 1PE sing 12 n n 
C13 H132 1PE sing 13 n n 
C23 H231 1PE sing 14 n n 
C23 H232 1PE sing 15 n n 
OH4 C24 1PE sing 16 n n 
C14 C24 1PE sing 17 n n 
C14 OH5 1PE sing 18 n n 
C14 H141 1PE sing 19 n n 
C14 H142 1PE sing 20 n n 
C24 H241 1PE sing 21 n n 
C24 H242 1PE sing 22 n n 
OH5 C25 1PE sing 23 n n 
C15 C25 1PE sing 24 n n 
C15 OH6 1PE sing 25 n n 
C15 H151 1PE sing 26 n n 
C15 H152 1PE sing 27 n n 
C25 H251 1PE sing 28 n n 
C25 H252 1PE sing 29 n n 
OH6 C26 1PE sing 30 n n 
C16 C26 1PE sing 31 n n 
C16 OH7 1PE sing 32 n n 
C16 H161 1PE sing 33 n n 
C16 H162 1PE sing 34 n n 
C26 H261 1PE sing 35 n n 
C26 H262 1PE sing 36 n n 
OH7 HO7 1PE sing 37 n n 
#
_atom_sites.entry_id                     3RDU 
_atom_sites.fract_transf_matrix[1][1]    0.017436 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017436 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013014 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 500 500 GOL GOL . 
C 2 GOL A 1 501 501 GOL GOL . 
D 2 GOL A 1 503 503 GOL GOL . 
E 3 1PE A 1 700 700 1PE P2K . 
F 4 HOH A 1 141 1 HOH HOH . 
F 4 HOH A 2 142 142 HOH HOH . 
F 4 HOH A 3 143 2 HOH HOH . 
F 4 HOH A 4 144 144 HOH HOH . 
F 4 HOH A 5 145 145 HOH HOH . 
F 4 HOH A 6 146 146 HOH HOH . 
F 4 HOH A 7 147 147 HOH HOH . 
F 4 HOH A 8 148 148 HOH HOH . 
F 4 HOH A 9 149 149 HOH HOH . 
F 4 HOH A 10 150 150 HOH HOH . 
F 4 HOH A 11 151 151 HOH HOH . 
F 4 HOH A 12 152 152 HOH HOH . 
F 4 HOH A 13 153 153 HOH HOH . 
F 4 HOH A 14 154 154 HOH HOH . 
F 4 HOH A 15 155 155 HOH HOH . 
F 4 HOH A 16 156 156 HOH HOH . 
F 4 HOH A 17 157 157 HOH HOH . 
F 4 HOH A 18 158 158 HOH HOH . 
F 4 HOH A 19 159 159 HOH HOH . 
F 4 HOH A 20 160 160 HOH HOH . 
F 4 HOH A 21 161 161 HOH HOH . 
F 4 HOH A 22 162 162 HOH HOH . 
F 4 HOH A 23 163 163 HOH HOH . 
F 4 HOH A 24 164 164 HOH HOH . 
F 4 HOH A 25 165 165 HOH HOH . 
F 4 HOH A 26 166 166 HOH HOH . 
F 4 HOH A 27 167 167 HOH HOH . 
F 4 HOH A 28 168 3 HOH HOH . 
F 4 HOH A 29 169 4 HOH HOH . 
F 4 HOH A 30 170 5 HOH HOH . 
F 4 HOH A 31 171 6 HOH HOH . 
F 4 HOH A 32 172 7 HOH HOH . 
F 4 HOH A 33 173 8 HOH HOH . 
F 4 HOH A 34 174 9 HOH HOH . 
F 4 HOH A 35 175 10 HOH HOH . 
F 4 HOH A 36 176 11 HOH HOH . 
F 4 HOH A 37 177 12 HOH HOH . 
F 4 HOH A 38 178 13 HOH HOH . 
F 4 HOH A 39 179 14 HOH HOH . 
F 4 HOH A 40 180 15 HOH HOH . 
F 4 HOH A 41 181 16 HOH HOH . 
F 4 HOH A 42 182 17 HOH HOH . 
F 4 HOH A 43 183 18 HOH HOH . 
F 4 HOH A 44 184 19 HOH HOH . 
F 4 HOH A 45 185 20 HOH HOH . 
F 4 HOH A 46 186 21 HOH HOH . 
F 4 HOH A 47 187 22 HOH HOH . 
F 4 HOH A 48 188 23 HOH HOH . 
F 4 HOH A 49 189 24 HOH HOH . 
F 4 HOH A 50 190 25 HOH HOH . 
F 4 HOH A 51 191 26 HOH HOH . 
F 4 HOH A 52 192 27 HOH HOH . 
F 4 HOH A 53 193 28 HOH HOH . 
F 4 HOH A 54 194 30 HOH HOH . 
F 4 HOH A 55 195 32 HOH HOH . 
F 4 HOH A 56 196 33 HOH HOH . 
F 4 HOH A 57 197 34 HOH HOH . 
F 4 HOH A 58 198 35 HOH HOH . 
F 4 HOH A 59 199 36 HOH HOH . 
F 4 HOH A 60 200 37 HOH HOH . 
F 4 HOH A 61 201 38 HOH HOH . 
F 4 HOH A 62 202 39 HOH HOH . 
F 4 HOH A 63 203 40 HOH HOH . 
F 4 HOH A 64 204 42 HOH HOH . 
F 4 HOH A 65 205 43 HOH HOH . 
F 4 HOH A 66 206 46 HOH HOH . 
F 4 HOH A 67 207 47 HOH HOH . 
F 4 HOH A 68 208 48 HOH HOH . 
F 4 HOH A 69 209 50 HOH HOH . 
F 4 HOH A 70 210 51 HOH HOH . 
F 4 HOH A 71 211 52 HOH HOH . 
F 4 HOH A 72 212 53 HOH HOH . 
F 4 HOH A 73 213 54 HOH HOH . 
F 4 HOH A 74 214 56 HOH HOH . 
F 4 HOH A 75 215 57 HOH HOH . 
F 4 HOH A 76 216 58 HOH HOH . 
F 4 HOH A 77 217 59 HOH HOH . 
F 4 HOH A 78 218 61 HOH HOH . 
F 4 HOH A 79 219 62 HOH HOH . 
F 4 HOH A 80 220 63 HOH HOH . 
F 4 HOH A 81 221 64 HOH HOH . 
F 4 HOH A 82 222 66 HOH HOH . 
F 4 HOH A 83 223 67 HOH HOH . 
F 4 HOH A 84 224 70 HOH HOH . 
F 4 HOH A 85 225 71 HOH HOH . 
F 4 HOH A 86 226 72 HOH HOH . 
F 4 HOH A 87 227 73 HOH HOH . 
F 4 HOH A 88 228 74 HOH HOH . 
F 4 HOH A 89 229 75 HOH HOH . 
F 4 HOH A 90 230 76 HOH HOH . 
F 4 HOH A 91 231 77 HOH HOH . 
F 4 HOH A 92 232 78 HOH HOH . 
F 4 HOH A 93 233 79 HOH HOH . 
F 4 HOH A 94 234 85 HOH HOH . 
F 4 HOH A 95 235 86 HOH HOH . 
F 4 HOH A 96 236 87 HOH HOH . 
F 4 HOH A 97 237 88 HOH HOH . 
F 4 HOH A 98 238 89 HOH HOH . 
F 4 HOH A 99 239 90 HOH HOH . 
F 4 HOH A 100 240 92 HOH HOH . 
F 4 HOH A 101 241 95 HOH HOH . 
F 4 HOH A 102 242 96 HOH HOH . 
F 4 HOH A 103 243 101 HOH HOH . 
F 4 HOH A 104 244 104 HOH HOH . 
F 4 HOH A 105 245 105 HOH HOH . 
F 4 HOH A 106 246 106 HOH HOH . 
F 4 HOH A 107 247 107 HOH HOH . 
F 4 HOH A 108 248 110 HOH HOH . 
F 4 HOH A 109 249 112 HOH HOH . 
F 4 HOH A 110 250 117 HOH HOH . 
F 4 HOH A 111 251 118 HOH HOH . 
F 4 HOH A 112 252 125 HOH HOH . 
F 4 HOH A 113 253 128 HOH HOH . 
F 4 HOH A 114 254 137 HOH HOH . 
F 4 HOH A 115 255 138 HOH HOH . 
F 4 HOH A 116 256 139 HOH HOH . 
F 4 HOH A 117 257 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH2 1PE . . . E 3 12.419 -1.194 -7.454 1 25.48 ? OH2 1PE 700 A 1 
HETATM 2 C C12 1PE . . . E 3 11.044 -1.476 -7.698 1 24.57 ? C12 1PE 700 A 1 
HETATM 3 C C22 1PE . . . E 3 10.351 -0.193 -8.08 1 24.84 ? C22 1PE 700 A 1 
HETATM 4 O OH3 1PE . . . E 3 11.064 0.384 -9.172 1 24.24 ? OH3 1PE 700 A 1 
HETATM 5 C C13 1PE . . . E 3 10.011 1.891 -10.32 1 23.68 ? C13 1PE 700 A 1 
HETATM 6 C C23 1PE . . . E 3 10.801 1.756 -9.059 1 24.28 ? C23 1PE 700 A 1 
HETATM 7 O OH4 1PE . . . E 3 10.943 2.083 -11.383 1 24.33 ? OH4 1PE 700 A 1 
HETATM 8 C C14 1PE . . . E 3 11.04 3.519 -13.379 1 24.97 ? C14 1PE 700 A 1 
HETATM 9 C C24 1PE . . . E 3 10.327 3.113 -12.105 1 23.42 ? C24 1PE 700 A 1 
HETATM 10 O OH5 1PE . . . E 3 10.174 4.506 -13.942 1 25.77 ? OH5 1PE 700 A 1 
HETATM 11 C C15 1PE . . . E 3 7.737 4.044 -13.934 1 27.66 ? C15 1PE 700 A 1 
HETATM 12 C C25 1PE . . . E 3 9.076 3.945 -14.664 1 26.58 ? C25 1PE 700 A 1 
HETATM 13 O OH6 1PE . . . E 3 6.885 3.052 -14.53 1 29.17 ? OH6 1PE 700 A 1 
HETATM 14 C C16 1PE . . . E 3 4.97 1.609 -14.445 1 30.2 ? C16 1PE 700 A 1 
HETATM 15 C C26 1PE . . . E 3 5.625 2.875 -13.883 1 29.41 ? C26 1PE 700 A 1 
HETATM 16 O OH7 1PE . . . E 3 4.359 1.869 -15.717 1 31 ? OH7 1PE 700 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          25 
_model_server_stats.element_count           16 
#