data_3RE6 # _model_server_result.job_id W6J1kY2Yqv6SoJu7Bpu5vg _model_server_result.datetime_utc '2024-11-18 08:47:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3re6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":141}' # _entry.id 3RE6 # _exptl.entry_id 3RE6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RE6 _cell.length_a 57.476 _cell.length_b 57.476 _cell.length_c 173.47 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RE6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_445 -y-1,-x-1,-z 0 -1 0 -1 0 0 0 0 -1 -57.476 -57.476 0 3 'crystal symmetry operation' 10_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -57.476 -57.476 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 3RE6 _atom_sites.fract_transf_matrix[1][1] 0.017399 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017399 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 141 1 GOL GOL . C 3 HOH A 1 142 142 HOH HOH . C 3 HOH A 2 143 143 HOH HOH . C 3 HOH A 3 144 1 HOH HOH . C 3 HOH A 4 145 145 HOH HOH . C 3 HOH A 5 146 146 HOH HOH . C 3 HOH A 6 147 2 HOH HOH . C 3 HOH A 7 148 4 HOH HOH . C 3 HOH A 8 149 5 HOH HOH . C 3 HOH A 9 150 6 HOH HOH . C 3 HOH A 10 151 151 HOH HOH . C 3 HOH A 11 152 7 HOH HOH . C 3 HOH A 12 153 8 HOH HOH . C 3 HOH A 13 154 154 HOH HOH . C 3 HOH A 14 155 155 HOH HOH . C 3 HOH A 15 156 156 HOH HOH . C 3 HOH A 16 157 9 HOH HOH . C 3 HOH A 17 158 158 HOH HOH . C 3 HOH A 18 159 11 HOH HOH . C 3 HOH A 19 160 160 HOH HOH . C 3 HOH A 20 161 161 HOH HOH . C 3 HOH A 21 162 13 HOH HOH . C 3 HOH A 22 163 163 HOH HOH . C 3 HOH A 23 164 164 HOH HOH . C 3 HOH A 24 165 14 HOH HOH . C 3 HOH A 25 166 15 HOH HOH . C 3 HOH A 26 167 167 HOH HOH . C 3 HOH A 27 168 168 HOH HOH . C 3 HOH A 28 169 17 HOH HOH . C 3 HOH A 29 170 18 HOH HOH . C 3 HOH A 30 171 171 HOH HOH . C 3 HOH A 31 172 20 HOH HOH . C 3 HOH A 32 173 22 HOH HOH . C 3 HOH A 33 174 174 HOH HOH . C 3 HOH A 34 175 175 HOH HOH . C 3 HOH A 35 176 176 HOH HOH . C 3 HOH A 36 177 177 HOH HOH . C 3 HOH A 37 178 23 HOH HOH . C 3 HOH A 38 179 26 HOH HOH . C 3 HOH A 39 180 180 HOH HOH . C 3 HOH A 40 181 181 HOH HOH . C 3 HOH A 41 182 29 HOH HOH . C 3 HOH A 42 183 183 HOH HOH . C 3 HOH A 43 184 184 HOH HOH . C 3 HOH A 44 185 185 HOH HOH . C 3 HOH A 45 186 186 HOH HOH . C 3 HOH A 46 187 187 HOH HOH . C 3 HOH A 47 188 188 HOH HOH . C 3 HOH A 48 189 189 HOH HOH . C 3 HOH A 49 190 190 HOH HOH . C 3 HOH A 50 191 191 HOH HOH . C 3 HOH A 51 192 192 HOH HOH . C 3 HOH A 52 193 193 HOH HOH . C 3 HOH A 53 194 194 HOH HOH . C 3 HOH A 54 195 30 HOH HOH . C 3 HOH A 55 196 196 HOH HOH . C 3 HOH A 56 197 197 HOH HOH . C 3 HOH A 57 198 198 HOH HOH . C 3 HOH A 58 199 199 HOH HOH . C 3 HOH A 59 200 200 HOH HOH . C 3 HOH A 60 201 201 HOH HOH . C 3 HOH A 61 202 33 HOH HOH . C 3 HOH A 62 203 34 HOH HOH . C 3 HOH A 63 204 35 HOH HOH . C 3 HOH A 64 205 37 HOH HOH . C 3 HOH A 65 206 38 HOH HOH . C 3 HOH A 66 207 42 HOH HOH . C 3 HOH A 67 208 46 HOH HOH . C 3 HOH A 68 209 51 HOH HOH . C 3 HOH A 69 210 52 HOH HOH . C 3 HOH A 70 211 53 HOH HOH . C 3 HOH A 71 212 55 HOH HOH . C 3 HOH A 72 213 58 HOH HOH . C 3 HOH A 73 214 60 HOH HOH . C 3 HOH A 74 215 66 HOH HOH . C 3 HOH A 75 216 70 HOH HOH . C 3 HOH A 76 217 74 HOH HOH . C 3 HOH A 77 218 76 HOH HOH . C 3 HOH A 78 219 78 HOH HOH . C 3 HOH A 79 220 82 HOH HOH . C 3 HOH A 80 221 86 HOH HOH . C 3 HOH A 81 222 98 HOH HOH . C 3 HOH A 82 223 102 HOH HOH . C 3 HOH A 83 224 103 HOH HOH . C 3 HOH A 84 225 104 HOH HOH . C 3 HOH A 85 226 107 HOH HOH . C 3 HOH A 86 227 117 HOH HOH . C 3 HOH A 87 228 119 HOH HOH . C 3 HOH A 88 229 120 HOH HOH . C 3 HOH A 89 230 122 HOH HOH . C 3 HOH A 90 231 124 HOH HOH . C 3 HOH A 91 232 125 HOH HOH . C 3 HOH A 92 233 126 HOH HOH . C 3 HOH A 93 234 132 HOH HOH . C 3 HOH A 94 235 134 HOH HOH . C 3 HOH A 95 236 136 HOH HOH . C 3 HOH A 96 237 139 HOH HOH . C 3 HOH A 97 238 141 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -21.109 -24.514 -14.249 1 62.09 ? C1 GOL 141 A 1 HETATM 2 O O1 GOL . . . B 2 -22.269 -25.305 -14.089 1 60.07 ? O1 GOL 141 A 1 HETATM 3 C C2 GOL . . . B 2 -19.855 -25.346 -13.993 1 60.23 ? C2 GOL 141 A 1 HETATM 4 O O2 GOL . . . B 2 -18.822 -24.956 -14.87 1 62.18 ? O2 GOL 141 A 1 HETATM 5 C C3 GOL . . . B 2 -19.383 -25.157 -12.558 1 62.19 ? C3 GOL 141 A 1 HETATM 6 O O3 GOL . . . B 2 -18.188 -25.878 -12.352 1 60.37 ? O3 GOL 141 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 518 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #