data_3RFS # _model_server_result.job_id IJgCv8coOrRkdQN-XNiIYw _model_server_result.datetime_utc '2024-11-15 10:38:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rfs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 3RFS # _exptl.entry_id 3RFS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.06 _cell.angle_gamma 90 _cell.entry_id 3RFS _cell.length_a 31.733 _cell.length_b 107.693 _cell.length_c 71.277 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RFS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 219 A CYS 219 1_555 A SG CYS 252 A CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf2 A SG CYS 221 A CYS 221 1_555 A SG CYS 264 A CYS 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? disulf ? disulf3 B SG CYS 219 B CYS 219 1_555 B SG CYS 252 B CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? disulf ? disulf4 B SG CYS 221 B CYS 221 1_555 B SG CYS 264 B CYS 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc1 C MG MG . A MG 302 1_555 E O HOH . A HOH 388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.887 ? metalc ? metalc2 D MG MG . B MG 301 1_555 F O HOH . B HOH 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc3 C MG MG . A MG 302 1_555 E O HOH . A HOH 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc4 D MG MG . B MG 301 1_555 F O HOH . B HOH 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc5 C MG MG . A MG 302 1_555 E O HOH . A HOH 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc6 D MG MG . B MG 301 1_555 F O HOH . B HOH 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc7 D MG MG . B MG 301 1_555 F O HOH . B HOH 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc8 D MG MG . B MG 301 1_555 E O HOH . A HOH 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc9 C MG MG . A MG 302 1_555 E O HOH . A HOH 387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc10 C MG MG . A MG 302 1_555 F O HOH . B HOH 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc11 C MG MG . A MG 302 1_555 E O HOH . A HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc12 D MG MG . B MG 301 1_555 F O HOH . B HOH 352 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3RFS _atom_sites.fract_transf_matrix[1][1] 0.031513 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000585 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009286 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014032 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 302 302 MG MG . D 2 MG B 1 301 301 MG MG . E 3 HOH A 1 273 3 HOH HOH . E 3 HOH A 2 274 4 HOH HOH . E 3 HOH A 3 275 5 HOH HOH . E 3 HOH A 4 276 6 HOH HOH . E 3 HOH A 5 277 7 HOH HOH . E 3 HOH A 6 278 9 HOH HOH . E 3 HOH A 7 279 10 HOH HOH . E 3 HOH A 8 280 11 HOH HOH . E 3 HOH A 9 281 14 HOH HOH . E 3 HOH A 10 282 15 HOH HOH . E 3 HOH A 11 283 17 HOH HOH . E 3 HOH A 12 284 18 HOH HOH . E 3 HOH A 13 285 22 HOH HOH . E 3 HOH A 14 286 24 HOH HOH . E 3 HOH A 15 287 25 HOH HOH . E 3 HOH A 16 288 28 HOH HOH . E 3 HOH A 17 289 30 HOH HOH . E 3 HOH A 18 290 31 HOH HOH . E 3 HOH A 19 291 32 HOH HOH . E 3 HOH A 20 292 35 HOH HOH . E 3 HOH A 21 293 36 HOH HOH . E 3 HOH A 22 294 40 HOH HOH . E 3 HOH A 23 295 41 HOH HOH . E 3 HOH A 24 296 42 HOH HOH . E 3 HOH A 25 297 44 HOH HOH . E 3 HOH A 26 298 45 HOH HOH . E 3 HOH A 27 299 49 HOH HOH . E 3 HOH A 28 300 50 HOH HOH . E 3 HOH A 29 301 51 HOH HOH . E 3 HOH A 30 303 53 HOH HOH . E 3 HOH A 31 304 54 HOH HOH . E 3 HOH A 32 305 56 HOH HOH . E 3 HOH A 33 306 59 HOH HOH . E 3 HOH A 34 307 63 HOH HOH . E 3 HOH A 35 308 64 HOH HOH . E 3 HOH A 36 309 65 HOH HOH . E 3 HOH A 37 310 68 HOH HOH . E 3 HOH A 38 311 69 HOH HOH . E 3 HOH A 39 312 70 HOH HOH . E 3 HOH A 40 313 71 HOH HOH . E 3 HOH A 41 314 73 HOH HOH . E 3 HOH A 42 315 77 HOH HOH . E 3 HOH A 43 316 80 HOH HOH . E 3 HOH A 44 317 83 HOH HOH . E 3 HOH A 45 318 84 HOH HOH . E 3 HOH A 46 319 86 HOH HOH . E 3 HOH A 47 320 88 HOH HOH . E 3 HOH A 48 321 92 HOH HOH . E 3 HOH A 49 322 93 HOH HOH . E 3 HOH A 50 323 95 HOH HOH . E 3 HOH A 51 324 96 HOH HOH . E 3 HOH A 52 325 98 HOH HOH . E 3 HOH A 53 326 100 HOH HOH . E 3 HOH A 54 327 101 HOH HOH . E 3 HOH A 55 328 102 HOH HOH . E 3 HOH A 56 329 103 HOH HOH . E 3 HOH A 57 330 104 HOH HOH . E 3 HOH A 58 331 106 HOH HOH . E 3 HOH A 59 332 107 HOH HOH . E 3 HOH A 60 333 109 HOH HOH . E 3 HOH A 61 334 111 HOH HOH . E 3 HOH A 62 335 115 HOH HOH . E 3 HOH A 63 336 116 HOH HOH . E 3 HOH A 64 337 118 HOH HOH . E 3 HOH A 65 338 119 HOH HOH . E 3 HOH A 66 339 120 HOH HOH . E 3 HOH A 67 340 122 HOH HOH . E 3 HOH A 68 341 125 HOH HOH . E 3 HOH A 69 342 126 HOH HOH . E 3 HOH A 70 343 129 HOH HOH . E 3 HOH A 71 344 130 HOH HOH . E 3 HOH A 72 345 131 HOH HOH . E 3 HOH A 73 346 134 HOH HOH . E 3 HOH A 74 347 136 HOH HOH . E 3 HOH A 75 348 139 HOH HOH . E 3 HOH A 76 349 142 HOH HOH . E 3 HOH A 77 350 144 HOH HOH . E 3 HOH A 78 351 146 HOH HOH . E 3 HOH A 79 352 149 HOH HOH . E 3 HOH A 80 353 150 HOH HOH . E 3 HOH A 81 354 151 HOH HOH . E 3 HOH A 82 355 152 HOH HOH . E 3 HOH A 83 356 153 HOH HOH . E 3 HOH A 84 357 156 HOH HOH . E 3 HOH A 85 358 157 HOH HOH . E 3 HOH A 86 359 159 HOH HOH . E 3 HOH A 87 360 160 HOH HOH . E 3 HOH A 88 361 161 HOH HOH . E 3 HOH A 89 362 162 HOH HOH . E 3 HOH A 90 363 165 HOH HOH . E 3 HOH A 91 364 166 HOH HOH . E 3 HOH A 92 365 167 HOH HOH . E 3 HOH A 93 366 168 HOH HOH . E 3 HOH A 94 367 171 HOH HOH . E 3 HOH A 95 368 173 HOH HOH . E 3 HOH A 96 369 174 HOH HOH . E 3 HOH A 97 370 175 HOH HOH . E 3 HOH A 98 371 176 HOH HOH . E 3 HOH A 99 372 177 HOH HOH . E 3 HOH A 100 373 178 HOH HOH . E 3 HOH A 101 374 181 HOH HOH . E 3 HOH A 102 375 182 HOH HOH . E 3 HOH A 103 376 184 HOH HOH . E 3 HOH A 104 377 185 HOH HOH . E 3 HOH A 105 378 186 HOH HOH . E 3 HOH A 106 379 188 HOH HOH . E 3 HOH A 107 380 189 HOH HOH . E 3 HOH A 108 381 190 HOH HOH . E 3 HOH A 109 382 192 HOH HOH . E 3 HOH A 110 383 195 HOH HOH . E 3 HOH A 111 384 203 HOH HOH . E 3 HOH A 112 385 204 HOH HOH . E 3 HOH A 113 386 205 HOH HOH . E 3 HOH A 114 387 206 HOH HOH . E 3 HOH A 115 388 208 HOH HOH . E 3 HOH A 116 389 209 HOH HOH . E 3 HOH A 117 390 211 HOH HOH . E 3 HOH A 118 391 218 HOH HOH . F 3 HOH B 1 273 1 HOH HOH . F 3 HOH B 2 274 2 HOH HOH . F 3 HOH B 3 275 8 HOH HOH . F 3 HOH B 4 276 12 HOH HOH . F 3 HOH B 5 277 13 HOH HOH . F 3 HOH B 6 278 16 HOH HOH . F 3 HOH B 7 279 19 HOH HOH . F 3 HOH B 8 280 20 HOH HOH . F 3 HOH B 9 281 21 HOH HOH . F 3 HOH B 10 282 23 HOH HOH . F 3 HOH B 11 283 26 HOH HOH . F 3 HOH B 12 284 27 HOH HOH . F 3 HOH B 13 285 29 HOH HOH . F 3 HOH B 14 286 33 HOH HOH . F 3 HOH B 15 287 34 HOH HOH . F 3 HOH B 16 288 37 HOH HOH . F 3 HOH B 17 289 38 HOH HOH . F 3 HOH B 18 290 39 HOH HOH . F 3 HOH B 19 291 43 HOH HOH . F 3 HOH B 20 292 46 HOH HOH . F 3 HOH B 21 293 47 HOH HOH . F 3 HOH B 22 294 48 HOH HOH . F 3 HOH B 23 295 52 HOH HOH . F 3 HOH B 24 296 55 HOH HOH . F 3 HOH B 25 297 57 HOH HOH . F 3 HOH B 26 298 58 HOH HOH . F 3 HOH B 27 299 60 HOH HOH . F 3 HOH B 28 300 61 HOH HOH . F 3 HOH B 29 302 62 HOH HOH . F 3 HOH B 30 303 66 HOH HOH . F 3 HOH B 31 304 67 HOH HOH . F 3 HOH B 32 305 72 HOH HOH . F 3 HOH B 33 306 74 HOH HOH . F 3 HOH B 34 307 75 HOH HOH . F 3 HOH B 35 308 76 HOH HOH . F 3 HOH B 36 309 78 HOH HOH . F 3 HOH B 37 310 79 HOH HOH . F 3 HOH B 38 311 81 HOH HOH . F 3 HOH B 39 312 82 HOH HOH . F 3 HOH B 40 313 85 HOH HOH . F 3 HOH B 41 314 87 HOH HOH . F 3 HOH B 42 315 89 HOH HOH . F 3 HOH B 43 316 90 HOH HOH . F 3 HOH B 44 317 91 HOH HOH . F 3 HOH B 45 318 94 HOH HOH . F 3 HOH B 46 319 97 HOH HOH . F 3 HOH B 47 320 99 HOH HOH . F 3 HOH B 48 321 105 HOH HOH . F 3 HOH B 49 322 108 HOH HOH . F 3 HOH B 50 323 110 HOH HOH . F 3 HOH B 51 324 112 HOH HOH . F 3 HOH B 52 325 113 HOH HOH . F 3 HOH B 53 326 114 HOH HOH . F 3 HOH B 54 327 117 HOH HOH . F 3 HOH B 55 328 121 HOH HOH . F 3 HOH B 56 329 123 HOH HOH . F 3 HOH B 57 330 124 HOH HOH . F 3 HOH B 58 331 127 HOH HOH . F 3 HOH B 59 332 128 HOH HOH . F 3 HOH B 60 333 132 HOH HOH . F 3 HOH B 61 334 133 HOH HOH . F 3 HOH B 62 335 135 HOH HOH . F 3 HOH B 63 336 137 HOH HOH . F 3 HOH B 64 337 138 HOH HOH . F 3 HOH B 65 338 140 HOH HOH . F 3 HOH B 66 339 141 HOH HOH . F 3 HOH B 67 340 143 HOH HOH . F 3 HOH B 68 341 145 HOH HOH . F 3 HOH B 69 342 147 HOH HOH . F 3 HOH B 70 343 148 HOH HOH . F 3 HOH B 71 344 154 HOH HOH . F 3 HOH B 72 345 155 HOH HOH . F 3 HOH B 73 346 158 HOH HOH . F 3 HOH B 74 347 163 HOH HOH . F 3 HOH B 75 348 164 HOH HOH . F 3 HOH B 76 349 169 HOH HOH . F 3 HOH B 77 350 170 HOH HOH . F 3 HOH B 78 351 172 HOH HOH . F 3 HOH B 79 352 179 HOH HOH . F 3 HOH B 80 353 180 HOH HOH . F 3 HOH B 81 354 183 HOH HOH . F 3 HOH B 82 355 187 HOH HOH . F 3 HOH B 83 356 191 HOH HOH . F 3 HOH B 84 357 193 HOH HOH . F 3 HOH B 85 358 194 HOH HOH . F 3 HOH B 86 359 196 HOH HOH . F 3 HOH B 87 360 197 HOH HOH . F 3 HOH B 88 361 198 HOH HOH . F 3 HOH B 89 362 199 HOH HOH . F 3 HOH B 90 363 200 HOH HOH . F 3 HOH B 91 364 201 HOH HOH . F 3 HOH B 92 365 202 HOH HOH . F 3 HOH B 93 366 207 HOH HOH . F 3 HOH B 94 367 210 HOH HOH . F 3 HOH B 95 368 212 HOH HOH . F 3 HOH B 96 369 213 HOH HOH . F 3 HOH B 97 370 214 HOH HOH . F 3 HOH B 98 371 215 HOH HOH . F 3 HOH B 99 372 216 HOH HOH . F 3 HOH B 100 373 217 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -11.943 _atom_site.Cartn_y 11.191 _atom_site.Cartn_z 49.955 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 11.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #