data_3RFZ # _model_server_result.job_id 6BeFZ9-t0eikeaEPAHmXuQ _model_server_result.datetime_utc '2024-12-26 12:39:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rfz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":845}' # _entry.id 3RFZ # _exptl.entry_id 3RFZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.13 _cell.angle_gamma 90 _cell.entry_id 3RFZ _cell.length_a 126.19 _cell.length_b 95.9 _cell.length_c 144.57 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RFZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 PISA hexameric 6 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K 1 1 D,E,F,L,M,N 2 1 A,B,C,G,H,I,J,K 3 1 D,E,F,L,M,N 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_646 -x+1,y-1/2,-z+1 -1 0 0 0 1 0 0 0 -1 71.729131 -47.95 133.919747 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 44 A CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf2 A SG CYS 161 A CYS 161 1_555 A SG CYS 187 A CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 B SG CYS 63 B CYS 63 1_555 B SG CYS 90 B CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 B SG CYS 810 B CYS 810 1_555 B SG CYS 832 B CYS 832 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf5 D SG CYS 3 D CYS 3 1_555 D SG CYS 44 D CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf6 D SG CYS 161 D CYS 161 1_555 D SG CYS 187 D CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf7 E SG CYS 63 E CYS 63 1_555 E SG CYS 90 E CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3RFZ _atom_sites.fract_transf_matrix[1][1] 0.007925 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003223 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010428 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007467 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 SO4 B 1 844 844 SO4 SO4 . H 4 SO4 B 1 845 845 SO4 SO4 . I 5 HOH A 1 280 280 HOH HOH . I 5 HOH A 2 281 281 HOH HOH . J 5 HOH B 1 846 846 HOH HOH . J 5 HOH B 2 847 847 HOH HOH . J 5 HOH B 3 848 848 HOH HOH . J 5 HOH B 4 849 849 HOH HOH . J 5 HOH B 5 850 850 HOH HOH . J 5 HOH B 6 851 851 HOH HOH . J 5 HOH B 7 852 852 HOH HOH . J 5 HOH B 8 853 853 HOH HOH . J 5 HOH B 9 854 854 HOH HOH . J 5 HOH B 10 855 855 HOH HOH . J 5 HOH B 11 856 856 HOH HOH . J 5 HOH B 12 857 857 HOH HOH . J 5 HOH B 13 858 858 HOH HOH . J 5 HOH B 14 859 859 HOH HOH . J 5 HOH B 15 860 860 HOH HOH . J 5 HOH B 16 861 861 HOH HOH . J 5 HOH B 17 862 862 HOH HOH . J 5 HOH B 18 863 863 HOH HOH . J 5 HOH B 19 864 864 HOH HOH . J 5 HOH B 20 865 865 HOH HOH . J 5 HOH B 21 866 866 HOH HOH . J 5 HOH B 22 867 867 HOH HOH . K 5 HOH C 1 212 212 HOH HOH . K 5 HOH C 2 213 213 HOH HOH . K 5 HOH C 3 214 214 HOH HOH . K 5 HOH C 4 215 215 HOH HOH . L 5 HOH D 1 280 280 HOH HOH . M 5 HOH E 1 844 844 HOH HOH . M 5 HOH E 2 845 845 HOH HOH . M 5 HOH E 3 846 846 HOH HOH . M 5 HOH E 4 847 847 HOH HOH . M 5 HOH E 5 848 848 HOH HOH . M 5 HOH E 6 849 849 HOH HOH . M 5 HOH E 7 850 850 HOH HOH . M 5 HOH E 8 851 851 HOH HOH . N 5 HOH F 1 212 212 HOH HOH . N 5 HOH F 2 213 213 HOH HOH . N 5 HOH F 3 214 214 HOH HOH . N 5 HOH F 4 215 215 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . H 4 6.333 19.982 71.911 1 63.07 ? S SO4 845 B 1 HETATM 2 O O1 SO4 . . . H 4 7.326 20.817 71.245 1 60.96 ? O1 SO4 845 B 1 HETATM 3 O O2 SO4 . . . H 4 5.445 19.351 70.945 1 62.14 ? O2 SO4 845 B 1 HETATM 4 O O3 SO4 . . . H 4 7.016 18.92 72.643 1 68.19 ? O3 SO4 845 B 1 HETATM 5 O O4 SO4 . . . H 4 5.552 20.804 72.834 1 61.96 ? O4 SO4 845 B 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #