data_3RGM # _model_server_result.job_id N1WW_EJqzcjy_nvhqNpyIA _model_server_result.datetime_utc '2024-11-27 01:30:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rgm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":804}' # _entry.id 3RGM # _exptl.entry_id 3RGM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.438 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3RGM _cell.length_a 81.629 _cell.length_b 81.629 _cell.length_c 227.729 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RGM _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 156 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 156 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id Q _struct_conn.ptnr2_label_atom_id S1 _struct_conn.ptnr2_label_comp_id MTN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id MTN _struct_conn.ptnr2_auth_seq_id 604 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.011 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H34 O5' _chem_comp.formula_weight 306.438 _chem_comp.id C8E _chem_comp.mon_nstd_flag . _chem_comp.name (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 C8E sing 70 n n C1 H11 C8E sing 71 n n C1 H12 C8E sing 72 n n C1 H13 C8E sing 73 n n C2 C3 C8E sing 74 n n C2 H21 C8E sing 75 n n C2 H22 C8E sing 76 n n C3 C4 C8E sing 77 n n C3 H31 C8E sing 78 n n C3 H32 C8E sing 79 n n C4 C5 C8E sing 80 n n C4 H41 C8E sing 81 n n C4 H42 C8E sing 82 n n C5 C6 C8E sing 83 n n C5 H51 C8E sing 84 n n C5 H52 C8E sing 85 n n C6 C7 C8E sing 86 n n C6 H61 C8E sing 87 n n C6 H62 C8E sing 88 n n C7 C8 C8E sing 89 n n C7 H71 C8E sing 90 n n C7 H72 C8E sing 91 n n C8 O9 C8E sing 92 n n C8 H81 C8E sing 93 n n C8 H82 C8E sing 94 n n O9 C10 C8E sing 95 n n C10 C11 C8E sing 96 n n C10 H101 C8E sing 97 n n C10 H102 C8E sing 98 n n C11 O12 C8E sing 99 n n C11 H111 C8E sing 100 n n C11 H112 C8E sing 101 n n O12 C13 C8E sing 102 n n C13 C14 C8E sing 103 n n C13 H131 C8E sing 104 n n C13 H132 C8E sing 105 n n C14 O15 C8E sing 106 n n C14 H141 C8E sing 107 n n C14 H142 C8E sing 108 n n O15 C16 C8E sing 109 n n C16 C17 C8E sing 110 n n C16 H161 C8E sing 111 n n C16 H162 C8E sing 112 n n C17 O18 C8E sing 113 n n C17 H171 C8E sing 114 n n C17 H172 C8E sing 115 n n O18 C19 C8E sing 116 n n C19 C20 C8E sing 117 n n C19 H191 C8E sing 118 n n C19 H192 C8E sing 119 n n C20 O21 C8E sing 120 n n C20 H201 C8E sing 121 n n C20 H202 C8E sing 122 n n O21 HO2 C8E sing 123 n n # _atom_sites.entry_id 3RGM _atom_sites.fract_transf_matrix[1][1] 0.012251 _atom_sites.fract_transf_matrix[1][2] 0.007073 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014146 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004391 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C8E A 1 800 800 C8E C8E . C 2 C8E A 1 801 801 C8E C8E . D 2 C8E A 1 802 802 C8E C8E . E 2 C8E A 1 803 803 C8E C8E . F 2 C8E A 1 804 804 C8E C8E . G 2 C8E A 1 805 805 C8E C8E . H 3 MG A 1 595 1 MG MG . I 3 MG A 1 596 2 MG MG . J 3 MG A 1 597 3 MG MG . K 3 MG A 1 598 4 MG MG . L 3 MG A 1 599 5 MG MG . M 3 MG A 1 600 6 MG MG . N 3 MG A 1 601 7 MG MG . O 3 MG A 1 602 8 MG MG . P 3 MG A 1 603 9 MG MG . Q 4 MTN A 1 604 156 MTN MTN . R 5 HOH A 1 605 1 HOH HOH . R 5 HOH A 2 606 2 HOH HOH . R 5 HOH A 3 607 3 HOH HOH . R 5 HOH A 4 608 6 HOH HOH . R 5 HOH A 5 609 7 HOH HOH . R 5 HOH A 6 610 8 HOH HOH . R 5 HOH A 7 611 9 HOH HOH . R 5 HOH A 8 612 11 HOH HOH . R 5 HOH A 9 613 12 HOH HOH . R 5 HOH A 10 614 14 HOH HOH . R 5 HOH A 11 615 15 HOH HOH . R 5 HOH A 12 616 16 HOH HOH . R 5 HOH A 13 617 17 HOH HOH . R 5 HOH A 14 618 19 HOH HOH . R 5 HOH A 15 619 20 HOH HOH . R 5 HOH A 16 620 21 HOH HOH . R 5 HOH A 17 621 23 HOH HOH . R 5 HOH A 18 622 24 HOH HOH . R 5 HOH A 19 623 25 HOH HOH . R 5 HOH A 20 624 27 HOH HOH . R 5 HOH A 21 625 28 HOH HOH . R 5 HOH A 22 626 29 HOH HOH . R 5 HOH A 23 627 30 HOH HOH . R 5 HOH A 24 628 31 HOH HOH . R 5 HOH A 25 629 32 HOH HOH . R 5 HOH A 26 630 33 HOH HOH . R 5 HOH A 27 631 35 HOH HOH . R 5 HOH A 28 632 36 HOH HOH . R 5 HOH A 29 633 37 HOH HOH . R 5 HOH A 30 634 40 HOH HOH . R 5 HOH A 31 635 41 HOH HOH . R 5 HOH A 32 636 42 HOH HOH . R 5 HOH A 33 637 44 HOH HOH . R 5 HOH A 34 638 45 HOH HOH . R 5 HOH A 35 639 46 HOH HOH . R 5 HOH A 36 640 49 HOH HOH . R 5 HOH A 37 641 50 HOH HOH . R 5 HOH A 38 642 52 HOH HOH . R 5 HOH A 39 643 55 HOH HOH . R 5 HOH A 40 644 57 HOH HOH . R 5 HOH A 41 645 60 HOH HOH . R 5 HOH A 42 646 61 HOH HOH . R 5 HOH A 43 647 63 HOH HOH . R 5 HOH A 44 648 64 HOH HOH . R 5 HOH A 45 649 65 HOH HOH . R 5 HOH A 46 650 70 HOH HOH . R 5 HOH A 47 651 71 HOH HOH . R 5 HOH A 48 652 74 HOH HOH . R 5 HOH A 49 653 75 HOH HOH . R 5 HOH A 50 654 79 HOH HOH . R 5 HOH A 51 655 81 HOH HOH . R 5 HOH A 52 656 82 HOH HOH . R 5 HOH A 53 657 84 HOH HOH . R 5 HOH A 54 658 85 HOH HOH . R 5 HOH A 55 659 87 HOH HOH . R 5 HOH A 56 660 91 HOH HOH . R 5 HOH A 57 661 96 HOH HOH . R 5 HOH A 58 662 100 HOH HOH . R 5 HOH A 59 663 101 HOH HOH . R 5 HOH A 60 664 102 HOH HOH . R 5 HOH A 61 665 103 HOH HOH . R 5 HOH A 62 666 104 HOH HOH . R 5 HOH A 63 667 109 HOH HOH . R 5 HOH A 64 668 112 HOH HOH . R 5 HOH A 65 669 121 HOH HOH . R 5 HOH A 66 670 125 HOH HOH . R 5 HOH A 67 671 128 HOH HOH . R 5 HOH A 68 672 142 HOH HOH . R 5 HOH A 69 673 145 HOH HOH . R 5 HOH A 70 674 162 HOH HOH . R 5 HOH A 71 675 164 HOH HOH . R 5 HOH A 72 676 165 HOH HOH . R 5 HOH A 73 677 167 HOH HOH . R 5 HOH A 74 678 170 HOH HOH . R 5 HOH A 75 679 174 HOH HOH . R 5 HOH A 76 680 175 HOH HOH . R 5 HOH A 77 681 186 HOH HOH . R 5 HOH A 78 682 190 HOH HOH . R 5 HOH A 79 683 191 HOH HOH . R 5 HOH A 80 684 204 HOH HOH . R 5 HOH A 81 685 206 HOH HOH . R 5 HOH A 82 686 207 HOH HOH . R 5 HOH A 83 687 208 HOH HOH . R 5 HOH A 84 688 209 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C8E . . . F 2 12.492 -43.753 -40.914 1 46.72 ? C1 C8E 804 A 1 HETATM 2 C C2 C8E . . . F 2 12.011 -43.158 -39.579 1 47.72 ? C2 C8E 804 A 1 HETATM 3 C C3 C8E . . . F 2 11.23 -44.131 -38.681 1 48.26 ? C3 C8E 804 A 1 HETATM 4 C C4 C8E . . . F 2 9.823 -43.643 -38.296 1 47.9 ? C4 C8E 804 A 1 HETATM 5 C C5 C8E . . . F 2 9.172 -44.532 -37.226 1 48.17 ? C5 C8E 804 A 1 HETATM 6 C C6 C8E . . . F 2 7.641 -44.589 -37.239 1 45.86 ? C6 C8E 804 A 1 HETATM 7 C C7 C8E . . . F 2 7.191 -45.846 -37.958 1 44.79 ? C7 C8E 804 A 1 HETATM 8 C C8 C8E . . . F 2 7.008 -47.028 -37.022 1 44.76 ? C8 C8E 804 A 1 HETATM 9 O O9 C8E . . . F 2 6.944 -48.215 -37.787 1 44.9 ? O9 C8E 804 A 1 HETATM 10 C C10 C8E . . . F 2 7.418 -49.393 -37.171 1 46.9 ? C10 C8E 804 A 1 HETATM 11 C C11 C8E . . . F 2 7.045 -49.506 -35.695 1 47.76 ? C11 C8E 804 A 1 HETATM 12 O O12 C8E . . . F 2 8.156 -49.278 -34.836 1 48.62 ? O12 C8E 804 A 1 HETATM 13 C C13 C8E . . . F 2 8.084 -50.081 -33.673 1 44.06 ? C13 C8E 804 A 1 HETATM 14 C C14 C8E . . . F 2 9.103 -49.584 -32.681 1 43.81 ? C14 C8E 804 A 1 HETATM 15 O O15 C8E . . . F 2 8.931 -48.194 -32.571 1 43.46 ? O15 C8E 804 A 1 HETATM 16 C C16 C8E . . . F 2 10.006 -47.522 -31.984 1 44.76 ? C16 C8E 804 A 1 HETATM 17 C C17 C8E . . . F 2 11.179 -47.824 -32.898 1 46.54 ? C17 C8E 804 A 1 HETATM 18 O O18 C8E . . . F 2 12.05 -46.726 -32.974 1 48.92 ? O18 C8E 804 A 1 HETATM 19 C C19 C8E . . . F 2 13.171 -47.086 -33.787 1 53.27 ? C19 C8E 804 A 1 HETATM 20 C C20 C8E . . . F 2 14.104 -48.096 -33.113 1 54.51 ? C20 C8E 804 A 1 HETATM 21 O O21 C8E . . . F 2 14.012 -49.399 -33.673 1 57.68 ? O21 C8E 804 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #