data_3RGN # _model_server_result.job_id slZ_3zLemEh-rhIllrJRPQ _model_server_result.datetime_utc '2024-11-07 00:31:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rgn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":803}' # _entry.id 3RGN # _exptl.entry_id 3RGN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.438 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3RGN _cell.length_a 81.681 _cell.length_b 81.681 _cell.length_c 227.148 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RGN _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 371 A CYS 371 1_555 L S1 MTN . A MTN 598 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc1 A OD1 ASP 411 A ASP 411 1_555 K MG MG . A MG 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? # _chem_comp.formula 'C16 H34 O5' _chem_comp.formula_weight 306.438 _chem_comp.id C8E _chem_comp.mon_nstd_flag . _chem_comp.name (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 C8E sing 70 n n C1 H11 C8E sing 71 n n C1 H12 C8E sing 72 n n C1 H13 C8E sing 73 n n C2 C3 C8E sing 74 n n C2 H21 C8E sing 75 n n C2 H22 C8E sing 76 n n C3 C4 C8E sing 77 n n C3 H31 C8E sing 78 n n C3 H32 C8E sing 79 n n C4 C5 C8E sing 80 n n C4 H41 C8E sing 81 n n C4 H42 C8E sing 82 n n C5 C6 C8E sing 83 n n C5 H51 C8E sing 84 n n C5 H52 C8E sing 85 n n C6 C7 C8E sing 86 n n C6 H61 C8E sing 87 n n C6 H62 C8E sing 88 n n C7 C8 C8E sing 89 n n C7 H71 C8E sing 90 n n C7 H72 C8E sing 91 n n C8 O9 C8E sing 92 n n C8 H81 C8E sing 93 n n C8 H82 C8E sing 94 n n O9 C10 C8E sing 95 n n C10 C11 C8E sing 96 n n C10 H101 C8E sing 97 n n C10 H102 C8E sing 98 n n C11 O12 C8E sing 99 n n C11 H111 C8E sing 100 n n C11 H112 C8E sing 101 n n O12 C13 C8E sing 102 n n C13 C14 C8E sing 103 n n C13 H131 C8E sing 104 n n C13 H132 C8E sing 105 n n C14 O15 C8E sing 106 n n C14 H141 C8E sing 107 n n C14 H142 C8E sing 108 n n O15 C16 C8E sing 109 n n C16 C17 C8E sing 110 n n C16 H161 C8E sing 111 n n C16 H162 C8E sing 112 n n C17 O18 C8E sing 113 n n C17 H171 C8E sing 114 n n C17 H172 C8E sing 115 n n O18 C19 C8E sing 116 n n C19 C20 C8E sing 117 n n C19 H191 C8E sing 118 n n C19 H192 C8E sing 119 n n C20 O21 C8E sing 120 n n C20 H201 C8E sing 121 n n C20 H202 C8E sing 122 n n O21 HO2 C8E sing 123 n n # _atom_sites.entry_id 3RGN _atom_sites.fract_transf_matrix[1][1] 0.012243 _atom_sites.fract_transf_matrix[1][2] 0.007068 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014137 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004402 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C8E A 1 800 800 C8E C8E . C 2 C8E A 1 801 801 C8E C8E . D 2 C8E A 1 802 802 C8E C8E . E 2 C8E A 1 803 803 C8E C8E . F 2 C8E A 1 804 804 C8E C8E . G 2 C8E A 1 805 805 C8E C8E . H 2 C8E A 1 806 806 C8E C8E . I 3 MG A 1 595 1 MG MG . J 3 MG A 1 596 2 MG MG . K 3 MG A 1 597 3 MG MG . L 4 MTN A 1 598 371 MTN MTN . M 5 HOH A 1 599 1 HOH HOH . M 5 HOH A 2 600 2 HOH HOH . M 5 HOH A 3 601 3 HOH HOH . M 5 HOH A 4 602 4 HOH HOH . M 5 HOH A 5 603 6 HOH HOH . M 5 HOH A 6 604 7 HOH HOH . M 5 HOH A 7 605 9 HOH HOH . M 5 HOH A 8 606 11 HOH HOH . M 5 HOH A 9 607 12 HOH HOH . M 5 HOH A 10 608 13 HOH HOH . M 5 HOH A 11 609 17 HOH HOH . M 5 HOH A 12 610 18 HOH HOH . M 5 HOH A 13 611 22 HOH HOH . M 5 HOH A 14 612 23 HOH HOH . M 5 HOH A 15 613 24 HOH HOH . M 5 HOH A 16 614 29 HOH HOH . M 5 HOH A 17 615 32 HOH HOH . M 5 HOH A 18 616 33 HOH HOH . M 5 HOH A 19 617 34 HOH HOH . M 5 HOH A 20 618 36 HOH HOH . M 5 HOH A 21 619 40 HOH HOH . M 5 HOH A 22 620 41 HOH HOH . M 5 HOH A 23 621 42 HOH HOH . M 5 HOH A 24 622 44 HOH HOH . M 5 HOH A 25 623 46 HOH HOH . M 5 HOH A 26 624 47 HOH HOH . M 5 HOH A 27 625 48 HOH HOH . M 5 HOH A 28 626 49 HOH HOH . M 5 HOH A 29 627 51 HOH HOH . M 5 HOH A 30 628 53 HOH HOH . M 5 HOH A 31 629 56 HOH HOH . M 5 HOH A 32 630 58 HOH HOH . M 5 HOH A 33 631 61 HOH HOH . M 5 HOH A 34 632 63 HOH HOH . M 5 HOH A 35 633 64 HOH HOH . M 5 HOH A 36 634 65 HOH HOH . M 5 HOH A 37 635 67 HOH HOH . M 5 HOH A 38 636 68 HOH HOH . M 5 HOH A 39 637 72 HOH HOH . M 5 HOH A 40 638 73 HOH HOH . M 5 HOH A 41 639 75 HOH HOH . M 5 HOH A 42 640 78 HOH HOH . M 5 HOH A 43 641 79 HOH HOH . M 5 HOH A 44 642 84 HOH HOH . M 5 HOH A 45 643 85 HOH HOH . M 5 HOH A 46 644 88 HOH HOH . M 5 HOH A 47 645 90 HOH HOH . M 5 HOH A 48 646 92 HOH HOH . M 5 HOH A 49 647 94 HOH HOH . M 5 HOH A 50 648 98 HOH HOH . M 5 HOH A 51 649 109 HOH HOH . M 5 HOH A 52 650 115 HOH HOH . M 5 HOH A 53 651 125 HOH HOH . M 5 HOH A 54 652 126 HOH HOH . M 5 HOH A 55 653 140 HOH HOH . M 5 HOH A 56 654 143 HOH HOH . M 5 HOH A 57 655 144 HOH HOH . M 5 HOH A 58 656 150 HOH HOH . M 5 HOH A 59 657 154 HOH HOH . M 5 HOH A 60 658 161 HOH HOH . M 5 HOH A 61 659 162 HOH HOH . M 5 HOH A 62 660 165 HOH HOH . M 5 HOH A 63 661 184 HOH HOH . M 5 HOH A 64 662 189 HOH HOH . M 5 HOH A 65 663 212 HOH HOH . M 5 HOH A 66 664 236 HOH HOH . M 5 HOH A 67 665 274 HOH HOH . M 5 HOH A 68 666 275 HOH HOH . M 5 HOH A 69 667 276 HOH HOH . M 5 HOH A 70 668 277 HOH HOH . M 5 HOH A 71 669 278 HOH HOH . M 5 HOH A 72 670 279 HOH HOH . M 5 HOH A 73 671 280 HOH HOH . M 5 HOH A 74 672 285 HOH HOH . M 5 HOH A 75 673 286 HOH HOH . M 5 HOH A 76 674 287 HOH HOH . M 5 HOH A 77 675 288 HOH HOH . M 5 HOH A 78 676 290 HOH HOH . M 5 HOH A 79 677 291 HOH HOH . M 5 HOH A 80 678 294 HOH HOH . M 5 HOH A 81 679 296 HOH HOH . M 5 HOH A 82 680 297 HOH HOH . M 5 HOH A 83 681 299 HOH HOH . M 5 HOH A 84 682 300 HOH HOH . M 5 HOH A 85 683 301 HOH HOH . M 5 HOH A 86 684 302 HOH HOH . M 5 HOH A 87 685 305 HOH HOH . M 5 HOH A 88 686 306 HOH HOH . M 5 HOH A 89 687 307 HOH HOH . M 5 HOH A 90 688 312 HOH HOH . M 5 HOH A 91 689 313 HOH HOH . M 5 HOH A 92 690 317 HOH HOH . M 5 HOH A 93 691 319 HOH HOH . M 5 HOH A 94 692 324 HOH HOH . M 5 HOH A 95 693 327 HOH HOH . M 5 HOH A 96 694 328 HOH HOH . M 5 HOH A 97 695 331 HOH HOH . M 5 HOH A 98 696 332 HOH HOH . M 5 HOH A 99 697 333 HOH HOH . M 5 HOH A 100 698 334 HOH HOH . M 5 HOH A 101 699 335 HOH HOH . M 5 HOH A 102 700 338 HOH HOH . M 5 HOH A 103 701 340 HOH HOH . M 5 HOH A 104 702 342 HOH HOH . M 5 HOH A 105 703 343 HOH HOH . M 5 HOH A 106 704 344 HOH HOH . M 5 HOH A 107 705 345 HOH HOH . M 5 HOH A 108 706 354 HOH HOH . M 5 HOH A 109 707 355 HOH HOH . M 5 HOH A 110 708 356 HOH HOH . M 5 HOH A 111 709 357 HOH HOH . M 5 HOH A 112 710 358 HOH HOH . M 5 HOH A 113 711 359 HOH HOH . M 5 HOH A 114 712 360 HOH HOH . M 5 HOH A 115 713 361 HOH HOH . M 5 HOH A 116 714 363 HOH HOH . M 5 HOH A 117 715 364 HOH HOH . M 5 HOH A 118 716 365 HOH HOH . M 5 HOH A 119 717 366 HOH HOH . M 5 HOH A 120 718 369 HOH HOH . M 5 HOH A 121 719 371 HOH HOH . M 5 HOH A 122 720 376 HOH HOH . M 5 HOH A 123 721 377 HOH HOH . M 5 HOH A 124 722 378 HOH HOH . M 5 HOH A 125 723 382 HOH HOH . M 5 HOH A 126 724 383 HOH HOH . M 5 HOH A 127 725 384 HOH HOH . M 5 HOH A 128 726 385 HOH HOH . M 5 HOH A 129 727 386 HOH HOH . M 5 HOH A 130 728 387 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C8E . . . E 2 -41.504 40.212 -43.841 1 85.63 ? C1 C8E 803 A 1 HETATM 2 C C2 C8E . . . E 2 -40.503 40.421 -42.709 1 87.48 ? C2 C8E 803 A 1 HETATM 3 C C3 C8E . . . E 2 -39.84 39.109 -42.314 1 87.38 ? C3 C8E 803 A 1 HETATM 4 C C4 C8E . . . E 2 -38.386 39.334 -41.951 1 87.63 ? C4 C8E 803 A 1 HETATM 5 C C5 C8E . . . E 2 -38.26 40.313 -40.793 1 87.96 ? C5 C8E 803 A 1 HETATM 6 C C6 C8E . . . E 2 -37.042 40.004 -39.944 1 87.74 ? C6 C8E 803 A 1 HETATM 7 C C7 C8E . . . E 2 -36.043 41.127 -40.05 1 89.65 ? C7 C8E 803 A 1 HETATM 8 C C8 C8E . . . E 2 -35.995 41.948 -38.788 1 91.74 ? C8 C8E 803 A 1 HETATM 9 O O9 C8E . . . E 2 -35.871 43.313 -39.122 1 97.42 ? O9 C8E 803 A 1 HETATM 10 C C10 C8E . . . E 2 -34.554 43.82 -39.256 1 100.09 ? C10 C8E 803 A 1 HETATM 11 C C11 C8E . . . E 2 -34.572 45.132 -40.054 1 102.1 ? C11 C8E 803 A 1 HETATM 12 O O12 C8E . . . E 2 -33.536 45.143 -41.029 1 105.37 ? O12 C8E 803 A 1 HETATM 13 C C13 C8E . . . E 2 -33.843 45.62 -42.342 1 107.1 ? C13 C8E 803 A 1 HETATM 14 C C14 C8E . . . E 2 -34.091 44.451 -43.311 1 107.52 ? C14 C8E 803 A 1 HETATM 15 O O15 C8E . . . E 2 -32.946 44.187 -44.125 1 107.73 ? O15 C8E 803 A 1 HETATM 16 C C16 C8E . . . E 2 -32.311 42.945 -43.844 1 105.75 ? C16 C8E 803 A 1 HETATM 17 C C17 C8E . . . E 2 -33.191 41.748 -44.248 1 104.13 ? C17 C8E 803 A 1 HETATM 18 O O18 C8E . . . E 2 -33.269 40.833 -43.177 1 100.28 ? O18 C8E 803 A 1 HETATM 19 C C19 C8E . . . E 2 -33.445 39.495 -43.571 1 98.55 ? C19 C8E 803 A 1 HETATM 20 C C20 C8E . . . E 2 -34.898 39.275 -43.919 1 98.15 ? C20 C8E 803 A 1 HETATM 21 O O21 C8E . . . E 2 -34.967 38.824 -45.233 1 96.75 ? O21 C8E 803 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #