data_3RH8
#
_model_server_result.job_id            rC6LmhgH1QE-RPKkT6UpOQ 
_model_server_result.datetime_utc      '2024-12-25 17:40:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rh8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":5201}' 
#
_entry.id    3RH8 
#
_exptl.entry_id    3RH8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.77 
_cell.angle_gamma         90 
_cell.entry_id            3RH8 
_cell.length_a            37.647 
_cell.length_b            77.473 
_cell.length_c            54.696 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RH8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 72 B CYS 108 1_555 C C4X FAD . B FAD 5201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? 
covale ? covale2 B SG CYS 72 D CYS 108 1_555 D C4X FAD . D FAD 5201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     3RH8 
_atom_sites.fract_transf_matrix[1][1]    0.026563 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004574 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012908 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018552 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD B 1 5201 5201 FAD FAD . 
D 2 FAD D 1 5201 5201 FAD FAD . 
E 3 HOH B 1 2 2 HOH WAT . 
E 3 HOH B 2 5 5 HOH WAT . 
E 3 HOH B 3 6 6 HOH WAT . 
E 3 HOH B 4 8 8 HOH WAT . 
E 3 HOH B 5 17 17 HOH WAT . 
E 3 HOH B 6 18 18 HOH WAT . 
E 3 HOH B 7 21 21 HOH WAT . 
E 3 HOH B 8 22 22 HOH WAT . 
E 3 HOH B 9 24 24 HOH WAT . 
E 3 HOH B 10 26 26 HOH WAT . 
E 3 HOH B 11 27 27 HOH WAT . 
E 3 HOH B 12 28 28 HOH WAT . 
E 3 HOH B 13 29 29 HOH WAT . 
E 3 HOH B 14 31 31 HOH WAT . 
E 3 HOH B 15 33 33 HOH WAT . 
E 3 HOH B 16 34 34 HOH WAT . 
E 3 HOH B 17 36 36 HOH WAT . 
E 3 HOH B 18 185 38 HOH WAT . 
E 3 HOH B 19 186 39 HOH WAT . 
E 3 HOH B 20 187 43 HOH WAT . 
E 3 HOH B 21 188 45 HOH WAT . 
E 3 HOH B 22 189 46 HOH WAT . 
E 3 HOH B 23 190 47 HOH WAT . 
E 3 HOH B 24 191 48 HOH WAT . 
E 3 HOH B 25 192 49 HOH WAT . 
E 3 HOH B 26 193 53 HOH WAT . 
E 3 HOH B 27 194 54 HOH WAT . 
E 3 HOH B 28 195 56 HOH WAT . 
E 3 HOH B 29 196 57 HOH WAT . 
E 3 HOH B 30 197 58 HOH WAT . 
E 3 HOH B 31 198 62 HOH WAT . 
E 3 HOH B 32 199 66 HOH WAT . 
E 3 HOH B 33 200 67 HOH WAT . 
E 3 HOH B 34 201 68 HOH WAT . 
F 3 HOH D 1 1 1 HOH WAT . 
F 3 HOH D 2 3 3 HOH WAT . 
F 3 HOH D 3 4 4 HOH WAT . 
F 3 HOH D 4 9 9 HOH WAT . 
F 3 HOH D 5 10 10 HOH WAT . 
F 3 HOH D 6 11 11 HOH WAT . 
F 3 HOH D 7 12 12 HOH WAT . 
F 3 HOH D 8 13 13 HOH WAT . 
F 3 HOH D 9 14 14 HOH WAT . 
F 3 HOH D 10 15 15 HOH WAT . 
F 3 HOH D 11 16 16 HOH WAT . 
F 3 HOH D 12 19 19 HOH WAT . 
F 3 HOH D 13 20 20 HOH WAT . 
F 3 HOH D 14 23 23 HOH WAT . 
F 3 HOH D 15 25 25 HOH WAT . 
F 3 HOH D 16 30 30 HOH WAT . 
F 3 HOH D 17 32 32 HOH WAT . 
F 3 HOH D 18 35 35 HOH WAT . 
F 3 HOH D 19 185 37 HOH WAT . 
F 3 HOH D 20 186 40 HOH WAT . 
F 3 HOH D 21 187 41 HOH WAT . 
F 3 HOH D 22 188 42 HOH WAT . 
F 3 HOH D 23 189 44 HOH WAT . 
F 3 HOH D 24 190 50 HOH WAT . 
F 3 HOH D 25 191 51 HOH WAT . 
F 3 HOH D 26 192 52 HOH WAT . 
F 3 HOH D 27 193 55 HOH WAT . 
F 3 HOH D 28 194 59 HOH WAT . 
F 3 HOH D 29 195 60 HOH WAT . 
F 3 HOH D 30 196 61 HOH WAT . 
F 3 HOH D 31 197 63 HOH WAT . 
F 3 HOH D 32 198 64 HOH WAT . 
F 3 HOH D 33 199 65 HOH WAT . 
F 3 HOH D 34 200 69 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 2 9.713 -1.016 -5.602 1 47.85 ? PA FAD 5201 B 1 
HETATM 2 O O1A FAD . . . C 2 10.516 -1.66 -4.53 1 50.12 ? O1A FAD 5201 B 1 
HETATM 3 O O2A FAD . . . C 2 10.403 -0.074 -6.52 1 50.43 ? O2A FAD 5201 B 1 
HETATM 4 O O5B FAD . . . C 2 9.014 -2.191 -6.431 1 53.66 ? O5B FAD 5201 B 1 
HETATM 5 C C5B FAD . . . C 2 8.165 -1.987 -7.586 1 59.36 ? C5B FAD 5201 B 1 
HETATM 6 C C4B FAD . . . C 2 8.344 -3.15 -8.609 1 62.82 ? C4B FAD 5201 B 1 
HETATM 7 O O4B FAD . . . C 2 8.34 -2.567 -9.928 1 64.75 ? O4B FAD 5201 B 1 
HETATM 8 C C3B FAD . . . C 2 9.635 -4.003 -8.509 1 64.62 ? C3B FAD 5201 B 1 
HETATM 9 O O3B FAD . . . C 2 9.379 -5.401 -8.52 1 65.52 ? O3B FAD 5201 B 1 
HETATM 10 C C2B FAD . . . C 2 10.504 -3.538 -9.689 1 65.29 ? C2B FAD 5201 B 1 
HETATM 11 O O2B FAD . . . C 2 11.386 -4.476 -10.277 1 66.05 ? O2B FAD 5201 B 1 
HETATM 12 C C1B FAD . . . C 2 9.504 -2.942 -10.69 1 65.61 ? C1B FAD 5201 B 1 
HETATM 13 N N9A FAD . . . C 2 9.916 -1.696 -11.35 1 66.81 ? N9A FAD 5201 B 1 
HETATM 14 C C8A FAD . . . C 2 10.799 -0.738 -10.91 1 66.92 ? C8A FAD 5201 B 1 
HETATM 15 N N7A FAD . . . C 2 10.987 0.26 -11.76 1 67.12 ? N7A FAD 5201 B 1 
HETATM 16 C C5A FAD . . . C 2 10.104 -0.028 -12.8 1 67.51 ? C5A FAD 5201 B 1 
HETATM 17 C C6A FAD . . . C 2 9.921 0.596 -14.109 1 67.96 ? C6A FAD 5201 B 1 
HETATM 18 N N6A FAD . . . C 2 10.465 1.792 -14.404 1 68.47 ? N6A FAD 5201 B 1 
HETATM 19 N N1A FAD . . . C 2 9 0.025 -14.957 1 68.21 ? N1A FAD 5201 B 1 
HETATM 20 C C2A FAD . . . C 2 8.456 -1.186 -14.629 1 67.74 ? C2A FAD 5201 B 1 
HETATM 21 N N3A FAD . . . C 2 8.598 -1.875 -13.475 1 67.57 ? N3A FAD 5201 B 1 
HETATM 22 C C4A FAD . . . C 2 9.569 -1.278 -12.638 1 67.33 ? C4A FAD 5201 B 1 
HETATM 23 N N1 FAD . . . C 2 1.791 -2.563 0.324 1 31.16 ? N1 FAD 5201 B 1 
HETATM 24 C C2 FAD . . . C 2 1.137 -3.782 0.364 1 32.14 ? C2 FAD 5201 B 1 
HETATM 25 O O2 FAD . . . C 2 1.546 -4.812 -0.271 1 33.79 ? O2 FAD 5201 B 1 
HETATM 26 N N3 FAD . . . C 2 -0.083 -3.878 1.124 1 32.7 ? N3 FAD 5201 B 1 
HETATM 27 C C4 FAD . . . C 2 -0.592 -2.805 1.9 1 31.64 ? C4 FAD 5201 B 1 
HETATM 28 O O4 FAD . . . C 2 -1.692 -2.914 2.492 1 32.1 ? O4 FAD 5201 B 1 
HETATM 29 C C4X FAD . . . C 2 0.298 -1.777 2.219 1 31.13 ? C4X FAD 5201 B 1 
HETATM 30 N N5 FAD . . . C 2 -0.286 -0.506 2.662 1 33.03 ? N5 FAD 5201 B 1 
HETATM 31 C C5X FAD . . . C 2 0.356 0.692 2.526 1 31.28 ? C5X FAD 5201 B 1 
HETATM 32 C C6 FAD . . . C 2 0.011 1.798 3.397 1 31.52 ? C6 FAD 5201 B 1 
HETATM 33 C C7 FAD . . . C 2 0.587 3.056 3.246 1 31.26 ? C7 FAD 5201 B 1 
HETATM 34 C C7M FAD . . . C 2 0.163 4.173 4.206 1 30.6 ? C7M FAD 5201 B 1 
HETATM 35 C C8 FAD . . . C 2 1.525 3.282 2.183 1 30.07 ? C8 FAD 5201 B 1 
HETATM 36 C C8M FAD . . . C 2 2.212 4.62 1.947 1 29.83 ? C8M FAD 5201 B 1 
HETATM 37 C C9 FAD . . . C 2 1.853 2.174 1.306 1 30.76 ? C9 FAD 5201 B 1 
HETATM 38 C C9A FAD . . . C 2 1.25 0.897 1.454 1 31.4 ? C9A FAD 5201 B 1 
HETATM 39 N N10 FAD . . . C 2 1.601 -0.25 0.631 1 30.21 ? N10 FAD 5201 B 1 
HETATM 40 C C10 FAD . . . C 2 1.166 -1.553 1.003 1 31.29 ? C10 FAD 5201 B 1 
HETATM 41 C C1' FAD . . . C 2 2.646 -0.133 -0.42 1 32.66 ? C1' FAD 5201 B 1 
HETATM 42 C C2' FAD . . . C 2 4.128 -0.262 -0.014 1 33.28 ? C2' FAD 5201 B 1 
HETATM 43 O O2' FAD . . . C 2 4.364 0.423 1.216 1 34.47 ? O2' FAD 5201 B 1 
HETATM 44 C C3' FAD . . . C 2 5.01 0.268 -1.169 1 34.26 ? C3' FAD 5201 B 1 
HETATM 45 O O3' FAD . . . C 2 4.622 1.614 -1.489 1 34.69 ? O3' FAD 5201 B 1 
HETATM 46 C C4' FAD . . . C 2 4.901 -0.638 -2.434 1 34.2 ? C4' FAD 5201 B 1 
HETATM 47 O O4' FAD . . . C 2 5.551 -1.863 -2.152 1 34.26 ? O4' FAD 5201 B 1 
HETATM 48 C C5' FAD . . . C 2 5.514 -0.001 -3.692 1 34.47 ? C5' FAD 5201 B 1 
HETATM 49 O O5' FAD . . . C 2 6.681 0.774 -3.374 1 36.83 ? O5' FAD 5201 B 1 
HETATM 50 P P FAD . . . C 2 8.155 0.161 -3.369 1 37.11 ? P FAD 5201 B 1 
HETATM 51 O O1P FAD . . . C 2 9.022 1.185 -2.79 1 35.79 ? O1P FAD 5201 B 1 
HETATM 52 O O2P FAD . . . C 2 8.133 -1.165 -2.69 1 37.16 ? O2P FAD 5201 B 1 
HETATM 53 O O3P FAD . . . C 2 8.557 -0.145 -4.903 1 43.27 ? O3P FAD 5201 B 1 
#
_model_server_stats.io_time_ms              100 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           53 
#