data_3RH8
#
_model_server_result.job_id            oWHYhyo9r_LZKLSd5XRtdw 
_model_server_result.datetime_utc      '2024-12-25 17:47:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rh8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":5201}' 
#
_entry.id    3RH8 
#
_exptl.entry_id    3RH8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.77 
_cell.angle_gamma         90 
_cell.entry_id            3RH8 
_cell.length_a            37.647 
_cell.length_b            77.473 
_cell.length_c            54.696 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RH8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 72 B CYS 108 1_555 C C4X FAD . B FAD 5201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? 
covale ? covale2 B SG CYS 72 D CYS 108 1_555 D C4X FAD . D FAD 5201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     3RH8 
_atom_sites.fract_transf_matrix[1][1]    0.026563 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004574 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012908 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018552 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD B 1 5201 5201 FAD FAD . 
D 2 FAD D 1 5201 5201 FAD FAD . 
E 3 HOH B 1 2 2 HOH WAT . 
E 3 HOH B 2 5 5 HOH WAT . 
E 3 HOH B 3 6 6 HOH WAT . 
E 3 HOH B 4 8 8 HOH WAT . 
E 3 HOH B 5 17 17 HOH WAT . 
E 3 HOH B 6 18 18 HOH WAT . 
E 3 HOH B 7 21 21 HOH WAT . 
E 3 HOH B 8 22 22 HOH WAT . 
E 3 HOH B 9 24 24 HOH WAT . 
E 3 HOH B 10 26 26 HOH WAT . 
E 3 HOH B 11 27 27 HOH WAT . 
E 3 HOH B 12 28 28 HOH WAT . 
E 3 HOH B 13 29 29 HOH WAT . 
E 3 HOH B 14 31 31 HOH WAT . 
E 3 HOH B 15 33 33 HOH WAT . 
E 3 HOH B 16 34 34 HOH WAT . 
E 3 HOH B 17 36 36 HOH WAT . 
E 3 HOH B 18 185 38 HOH WAT . 
E 3 HOH B 19 186 39 HOH WAT . 
E 3 HOH B 20 187 43 HOH WAT . 
E 3 HOH B 21 188 45 HOH WAT . 
E 3 HOH B 22 189 46 HOH WAT . 
E 3 HOH B 23 190 47 HOH WAT . 
E 3 HOH B 24 191 48 HOH WAT . 
E 3 HOH B 25 192 49 HOH WAT . 
E 3 HOH B 26 193 53 HOH WAT . 
E 3 HOH B 27 194 54 HOH WAT . 
E 3 HOH B 28 195 56 HOH WAT . 
E 3 HOH B 29 196 57 HOH WAT . 
E 3 HOH B 30 197 58 HOH WAT . 
E 3 HOH B 31 198 62 HOH WAT . 
E 3 HOH B 32 199 66 HOH WAT . 
E 3 HOH B 33 200 67 HOH WAT . 
E 3 HOH B 34 201 68 HOH WAT . 
F 3 HOH D 1 1 1 HOH WAT . 
F 3 HOH D 2 3 3 HOH WAT . 
F 3 HOH D 3 4 4 HOH WAT . 
F 3 HOH D 4 9 9 HOH WAT . 
F 3 HOH D 5 10 10 HOH WAT . 
F 3 HOH D 6 11 11 HOH WAT . 
F 3 HOH D 7 12 12 HOH WAT . 
F 3 HOH D 8 13 13 HOH WAT . 
F 3 HOH D 9 14 14 HOH WAT . 
F 3 HOH D 10 15 15 HOH WAT . 
F 3 HOH D 11 16 16 HOH WAT . 
F 3 HOH D 12 19 19 HOH WAT . 
F 3 HOH D 13 20 20 HOH WAT . 
F 3 HOH D 14 23 23 HOH WAT . 
F 3 HOH D 15 25 25 HOH WAT . 
F 3 HOH D 16 30 30 HOH WAT . 
F 3 HOH D 17 32 32 HOH WAT . 
F 3 HOH D 18 35 35 HOH WAT . 
F 3 HOH D 19 185 37 HOH WAT . 
F 3 HOH D 20 186 40 HOH WAT . 
F 3 HOH D 21 187 41 HOH WAT . 
F 3 HOH D 22 188 42 HOH WAT . 
F 3 HOH D 23 189 44 HOH WAT . 
F 3 HOH D 24 190 50 HOH WAT . 
F 3 HOH D 25 191 51 HOH WAT . 
F 3 HOH D 26 192 52 HOH WAT . 
F 3 HOH D 27 193 55 HOH WAT . 
F 3 HOH D 28 194 59 HOH WAT . 
F 3 HOH D 29 195 60 HOH WAT . 
F 3 HOH D 30 196 61 HOH WAT . 
F 3 HOH D 31 197 63 HOH WAT . 
F 3 HOH D 32 198 64 HOH WAT . 
F 3 HOH D 33 199 65 HOH WAT . 
F 3 HOH D 34 200 69 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . D 2 -29.72 9.584 37.931 1 51.22 ? PA FAD 5201 D 1 
HETATM 2 O O1A FAD . . . D 2 -30.217 8.173 37.856 1 49.75 ? O1A FAD 5201 D 1 
HETATM 3 O O2A FAD . . . D 2 -30.732 10.678 38.041 1 51.7 ? O2A FAD 5201 D 1 
HETATM 4 O O5B FAD . . . D 2 -28.695 9.638 39.156 1 54.24 ? O5B FAD 5201 D 1 
HETATM 5 C C5B FAD . . . D 2 -27.989 10.809 39.627 1 59.52 ? C5B FAD 5201 D 1 
HETATM 6 C C4B FAD . . . D 2 -27.405 10.451 41.002 1 62.51 ? C4B FAD 5201 D 1 
HETATM 7 O O4B FAD . . . D 2 -26.866 11.651 41.605 1 64.71 ? O4B FAD 5201 D 1 
HETATM 8 C C3B FAD . . . D 2 -28.387 9.845 42.049 1 63.77 ? C3B FAD 5201 D 1 
HETATM 9 O O3B FAD . . . D 2 -28.429 8.433 42.094 1 64.67 ? O3B FAD 5201 D 1 
HETATM 10 C C2B FAD . . . D 2 -27.955 10.478 43.369 1 64.89 ? C2B FAD 5201 D 1 
HETATM 11 O O2B FAD . . . D 2 -27.088 9.736 44.207 1 66.18 ? O2B FAD 5201 D 1 
HETATM 12 C C1B FAD . . . D 2 -27.381 11.829 42.944 1 65.43 ? C1B FAD 5201 D 1 
HETATM 13 N N9A FAD . . . D 2 -28.34 12.962 42.967 1 66.25 ? N9A FAD 5201 D 1 
HETATM 14 C C8A FAD . . . D 2 -29.563 13.096 42.341 1 66.59 ? C8A FAD 5201 D 1 
HETATM 15 N N7A FAD . . . D 2 -30.169 14.247 42.566 1 66.51 ? N7A FAD 5201 D 1 
HETATM 16 C C5A FAD . . . D 2 -29.277 14.94 43.386 1 66.87 ? C5A FAD 5201 D 1 
HETATM 17 C C6A FAD . . . D 2 -29.34 16.259 44.004 1 67.02 ? C6A FAD 5201 D 1 
HETATM 18 N N6A FAD . . . D 2 -30.388 17.086 43.81 1 67.61 ? N6A FAD 5201 D 1 
HETATM 19 N N1A FAD . . . D 2 -28.275 16.663 44.781 1 67.12 ? N1A FAD 5201 D 1 
HETATM 20 C C2A FAD . . . D 2 -27.221 15.801 44.958 1 67.12 ? C2A FAD 5201 D 1 
HETATM 21 N N3A FAD . . . D 2 -27.065 14.554 44.445 1 66.7 ? N3A FAD 5201 D 1 
HETATM 22 C C4A FAD . . . D 2 -28.173 14.182 43.642 1 66.7 ? C4A FAD 5201 D 1 
HETATM 23 N N1 FAD . . . D 2 -22.179 6.297 32.024 1 34.43 ? N1 FAD 5201 D 1 
HETATM 24 C C2 FAD . . . D 2 -21.146 5.536 32.543 1 34.53 ? C2 FAD 5201 D 1 
HETATM 25 O O2 FAD . . . D 2 -21.131 5.115 33.736 1 35.15 ? O2 FAD 5201 D 1 
HETATM 26 N N3 FAD . . . D 2 -20.053 5.187 31.681 1 33.62 ? N3 FAD 5201 D 1 
HETATM 27 C C4 FAD . . . D 2 -19.993 5.569 30.314 1 33.47 ? C4 FAD 5201 D 1 
HETATM 28 O O4 FAD . . . D 2 -18.979 5.285 29.619 1 33.79 ? O4 FAD 5201 D 1 
HETATM 29 C C4X FAD . . . D 2 -21.194 5.959 29.715 1 33.77 ? C4X FAD 5201 D 1 
HETATM 30 N N5 FAD . . . D 2 -21.115 6.716 28.466 1 32.33 ? N5 FAD 5201 D 1 
HETATM 31 C C5X FAD . . . D 2 -22.133 7.514 28.033 1 34.29 ? C5X FAD 5201 D 1 
HETATM 32 C C6 FAD . . . D 2 -22.254 7.823 26.625 1 34.57 ? C6 FAD 5201 D 1 
HETATM 33 C C7 FAD . . . D 2 -23.24 8.69 26.147 1 33.55 ? C7 FAD 5201 D 1 
HETATM 34 C C7M FAD . . . D 2 -23.315 8.955 24.631 1 33.68 ? C7M FAD 5201 D 1 
HETATM 35 C C8 FAD . . . D 2 -24.098 9.357 27.065 1 35.82 ? C8 FAD 5201 D 1 
HETATM 36 C C8M FAD . . . D 2 -25.186 10.315 26.621 1 35.51 ? C8M FAD 5201 D 1 
HETATM 37 C C9 FAD . . . D 2 -23.965 9.053 28.481 1 34.44 ? C9 FAD 5201 D 1 
HETATM 38 C C9A FAD . . . D 2 -22.956 8.178 28.965 1 33.3 ? C9A FAD 5201 D 1 
HETATM 39 N N10 FAD . . . D 2 -22.838 7.806 30.358 1 32.83 ? N10 FAD 5201 D 1 
HETATM 40 C C10 FAD . . . D 2 -21.995 6.724 30.737 1 33.6 ? C10 FAD 5201 D 1 
HETATM 41 C C1' FAD . . . D 2 -23.793 8.358 31.367 1 33.83 ? C1' FAD 5201 D 1 
HETATM 42 C C2' FAD . . . D 2 -25.036 7.546 31.801 1 33.88 ? C2' FAD 5201 D 1 
HETATM 43 O O2' FAD . . . D 2 -25.657 6.931 30.666 1 33.68 ? O2' FAD 5201 D 1 
HETATM 44 C C3' FAD . . . D 2 -25.984 8.497 32.571 1 35.23 ? C3' FAD 5201 D 1 
HETATM 45 O O3' FAD . . . D 2 -26.348 9.568 31.708 1 36.16 ? O3' FAD 5201 D 1 
HETATM 46 C C4' FAD . . . D 2 -25.319 9.078 33.849 1 35.75 ? C4' FAD 5201 D 1 
HETATM 47 O O4' FAD . . . D 2 -25.018 7.999 34.721 1 34.32 ? O4' FAD 5201 D 1 
HETATM 48 C C5' FAD . . . D 2 -26.19 10.116 34.594 1 37.3 ? C5' FAD 5201 D 1 
HETATM 49 O O5' FAD . . . D 2 -27.601 9.949 34.33 1 39.82 ? O5' FAD 5201 D 1 
HETATM 50 P P FAD . . . D 2 -28.552 9.051 35.233 1 41.42 ? P FAD 5201 D 1 
HETATM 51 O O1P FAD . . . D 2 -29.767 8.859 34.446 1 43.3 ? O1P FAD 5201 D 1 
HETATM 52 O O2P FAD . . . D 2 -27.81 7.829 35.657 1 40.7 ? O2P FAD 5201 D 1 
HETATM 53 O O3P FAD . . . D 2 -28.89 9.894 36.572 1 45.29 ? O3P FAD 5201 D 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           53 
#