data_3RHS # _model_server_result.job_id dOIpTG6pBgGVMr8mQbCzZg _model_server_result.datetime_utc '2025-02-17 23:55:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rhs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":162}' # _entry.id 3RHS # _exptl.entry_id 3RHS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3RHS _cell.length_a 98.886 _cell.length_b 98.886 _cell.length_c 114.869 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RHS _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -49.443 85.637788 0 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -98.886 0 0 4 'crystal symmetry operation' 16_454 y-2/3,x+2/3,-z-1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 -98.886 57.091859 -38.289667 5 'crystal symmetry operation' 17_554 x-y+1/3,-y+2/3,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 57.091859 -38.289667 6 'crystal symmetry operation' 18_444 -x-2/3,-x+y-1/3,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 -49.443 -28.545929 -38.289667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 3RHS _atom_sites.fract_transf_matrix[1][1] 0.010113 _atom_sites.fract_transf_matrix[1][2] 0.005839 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011677 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008706 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 162 162 COA COA . C 3 HOH A 1 159 159 HOH HOH . C 3 HOH A 2 160 160 HOH HOH . C 3 HOH A 3 161 161 HOH HOH . C 3 HOH A 4 163 163 HOH HOH . C 3 HOH A 5 164 164 HOH HOH . C 3 HOH A 6 165 165 HOH HOH . C 3 HOH A 7 166 166 HOH HOH . C 3 HOH A 8 167 167 HOH HOH . C 3 HOH A 9 168 168 HOH HOH . C 3 HOH A 10 169 169 HOH HOH . C 3 HOH A 11 170 170 HOH HOH . C 3 HOH A 12 171 171 HOH HOH . C 3 HOH A 13 172 172 HOH HOH . C 3 HOH A 14 173 173 HOH HOH . C 3 HOH A 15 174 174 HOH HOH . C 3 HOH A 16 175 175 HOH HOH . C 3 HOH A 17 176 176 HOH HOH . C 3 HOH A 18 177 177 HOH HOH . C 3 HOH A 19 178 178 HOH HOH . C 3 HOH A 20 179 179 HOH HOH . C 3 HOH A 21 180 180 HOH HOH . C 3 HOH A 22 181 181 HOH HOH . C 3 HOH A 23 182 182 HOH HOH . C 3 HOH A 24 183 183 HOH HOH . C 3 HOH A 25 184 184 HOH HOH . C 3 HOH A 26 185 185 HOH HOH . C 3 HOH A 27 186 186 HOH HOH . C 3 HOH A 28 187 187 HOH HOH . C 3 HOH A 29 188 188 HOH HOH . C 3 HOH A 30 189 189 HOH HOH . C 3 HOH A 31 190 190 HOH HOH . C 3 HOH A 32 191 191 HOH HOH . C 3 HOH A 33 192 192 HOH HOH . C 3 HOH A 34 193 193 HOH HOH . C 3 HOH A 35 194 194 HOH HOH . C 3 HOH A 36 195 195 HOH HOH . C 3 HOH A 37 196 196 HOH HOH . C 3 HOH A 38 197 197 HOH HOH . C 3 HOH A 39 198 198 HOH HOH . C 3 HOH A 40 199 199 HOH HOH . C 3 HOH A 41 200 200 HOH HOH . C 3 HOH A 42 201 201 HOH HOH . C 3 HOH A 43 202 202 HOH HOH . C 3 HOH A 44 203 203 HOH HOH . C 3 HOH A 45 204 204 HOH HOH . C 3 HOH A 46 205 205 HOH HOH . C 3 HOH A 47 206 206 HOH HOH . C 3 HOH A 48 207 207 HOH HOH . C 3 HOH A 49 208 208 HOH HOH . C 3 HOH A 50 209 209 HOH HOH . C 3 HOH A 51 210 210 HOH HOH . C 3 HOH A 52 211 211 HOH HOH . C 3 HOH A 53 212 212 HOH HOH . C 3 HOH A 54 213 213 HOH HOH . C 3 HOH A 55 214 214 HOH HOH . C 3 HOH A 56 215 215 HOH HOH . C 3 HOH A 57 216 216 HOH HOH . C 3 HOH A 58 217 217 HOH HOH . C 3 HOH A 59 218 218 HOH HOH . C 3 HOH A 60 219 219 HOH HOH . C 3 HOH A 61 220 220 HOH HOH . C 3 HOH A 62 221 221 HOH HOH . C 3 HOH A 63 222 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . B 2 -46.199 25.708 -4.981 1 57.17 ? N1A COA 162 A 1 HETATM 2 C C2A COA . . . B 2 -44.968 26.051 -5.34 1 57.03 ? C2A COA 162 A 1 HETATM 3 N N3A COA . . . B 2 -44.047 26.254 -4.428 1 57.04 ? N3A COA 162 A 1 HETATM 4 C C4A COA . . . B 2 -44.346 26.083 -3.105 1 57.06 ? C4A COA 162 A 1 HETATM 5 C C5A COA . . . B 2 -45.614 25.692 -2.725 1 57.1 ? C5A COA 162 A 1 HETATM 6 C C6A COA . . . B 2 -46.56 25.494 -3.699 1 57.14 ? C6A COA 162 A 1 HETATM 7 N N6A COA . . . B 2 -47.827 25.112 -3.373 1 57.22 ? N6A COA 162 A 1 HETATM 8 N N7A COA . . . B 2 -45.65 25.599 -1.394 1 57.13 ? N7A COA 162 A 1 HETATM 9 C C8A COA . . . B 2 -44.424 25.924 -0.931 1 57.12 ? C8A COA 162 A 1 HETATM 10 N N9A COA . . . B 2 -43.652 26.218 -1.975 1 57.04 ? N9A COA 162 A 1 HETATM 11 C C1B COA . . . B 2 -42.243 26.594 -1.83 1 56.89 ? C1B COA 162 A 1 HETATM 12 C C2B COA . . . B 2 -41.724 25.456 -1.003 1 56.98 ? C2B COA 162 A 1 HETATM 13 O O2B COA . . . B 2 -41.111 25.881 0.192 1 57.1 ? O2B COA 162 A 1 HETATM 14 C C3B COA . . . B 2 -40.749 24.81 -1.931 1 57.02 ? C3B COA 162 A 1 HETATM 15 O O3B COA . . . B 2 -39.664 24.327 -1.223 1 58.1 ? O3B COA 162 A 1 HETATM 16 P P3B COA . . . B 2 -40.245 23.19 -0.373 1 58.99 ? P3B COA 162 A 1 HETATM 17 O O7A COA . . . B 2 -40.067 23.68 1.018 1 59.01 ? O7A COA 162 A 1 HETATM 18 O O8A COA . . . B 2 -41.671 23.083 -0.726 1 59.08 ? O8A COA 162 A 1 HETATM 19 O O9A COA . . . B 2 -39.465 21.987 -0.714 1 59.07 ? O9A COA 162 A 1 HETATM 20 C C4B COA . . . B 2 -40.422 25.796 -2.993 1 56.17 ? C4B COA 162 A 1 HETATM 21 O O4B COA . . . B 2 -41.592 26.564 -3.091 1 56.53 ? O4B COA 162 A 1 HETATM 22 C C5B COA . . . B 2 -40.196 24.983 -4.226 1 54.74 ? C5B COA 162 A 1 HETATM 23 O O5B COA . . . B 2 -39.284 25.733 -4.97 1 53.21 ? O5B COA 162 A 1 HETATM 24 P P1A COA . . . B 2 -37.792 25.324 -5.075 1 51.8 ? P1A COA 162 A 1 HETATM 25 O O1A COA . . . B 2 -37.655 23.927 -4.735 1 52.2 ? O1A COA 162 A 1 HETATM 26 O O2A COA . . . B 2 -37.329 25.762 -6.404 1 52.22 ? O2A COA 162 A 1 HETATM 27 O O3A COA . . . B 2 -37.228 26.286 -3.965 1 50.49 ? O3A COA 162 A 1 HETATM 28 P P2A COA . . . B 2 -35.906 26.121 -3.094 1 49.12 ? P2A COA 162 A 1 HETATM 29 O O4A COA . . . B 2 -35.071 25.024 -3.575 1 49.12 ? O4A COA 162 A 1 HETATM 30 O O5A COA . . . B 2 -36.317 26.026 -1.687 1 49.19 ? O5A COA 162 A 1 HETATM 31 O O6A COA . . . B 2 -35.18 27.546 -3.162 1 48.02 ? O6A COA 162 A 1 HETATM 32 C CBP COA . . . B 2 -34.194 29.638 -3.809 1 44.63 ? CBP COA 162 A 1 HETATM 33 C CCP COA . . . B 2 -35.244 28.575 -4.137 1 46.11 ? CCP COA 162 A 1 HETATM 34 C CDP COA . . . B 2 -33.261 29.066 -2.765 1 44.78 ? CDP COA 162 A 1 HETATM 35 C CEP COA . . . B 2 -33.411 29.96 -5.079 1 44.89 ? CEP COA 162 A 1 HETATM 36 C CAP COA . . . B 2 -34.812 30.925 -3.285 1 42.71 ? CAP COA 162 A 1 HETATM 37 O OAP COA . . . B 2 -35.672 30.678 -2.206 1 42.89 ? OAP COA 162 A 1 HETATM 38 C C9P COA . . . B 2 -33.816 31.946 -2.828 1 40.42 ? C9P COA 162 A 1 HETATM 39 O O9P COA . . . B 2 -33.203 32.564 -3.637 1 40.12 ? O9P COA 162 A 1 HETATM 40 N N8P COA . . . B 2 -33.635 32.154 -1.54 1 37.8 ? N8P COA 162 A 1 HETATM 41 C C7P COA . . . B 2 -32.695 33.11 -0.981 1 34.59 ? C7P COA 162 A 1 HETATM 42 C C6P COA . . . B 2 -33.324 34.474 -0.729 1 31.67 ? C6P COA 162 A 1 HETATM 43 C C5P COA . . . B 2 -33.412 35.388 -1.973 1 29.63 ? C5P COA 162 A 1 HETATM 44 O O5P COA . . . B 2 -32.492 35.642 -2.653 1 27.08 ? O5P COA 162 A 1 HETATM 45 N N4P COA . . . B 2 -34.578 35.939 -2.164 1 28.96 ? N4P COA 162 A 1 HETATM 46 C C3P COA . . . B 2 -34.917 36.852 -3.238 1 29.19 ? C3P COA 162 A 1 HETATM 47 C C2P COA . . . B 2 -35.294 36.007 -4.433 1 29.64 ? C2P COA 162 A 1 HETATM 48 S S1P COA . . . B 2 -35.69 37.087 -5.829 1 31.31 ? S1P COA 162 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 48 #