data_3RHW # _model_server_result.job_id Tkiyj9i0pVIqFjziZapiFQ _model_server_result.datetime_utc '2024-11-24 15:34:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rhw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":350}' # _entry.id 3RHW # _exptl.entry_id 3RHW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RHW _cell.length_a 154.85 _cell.length_b 154.85 _cell.length_c 574.61 _cell.Z_PDB 40 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RHW _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentadecameric _pdbx_struct_assembly.oligomeric_count 15 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 Q N N ? 5 R N N ? 5 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 130 A CYS 130 1_555 A SG CYS 144 A CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 191 A CYS 191 1_555 A SG CYS 202 A CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 B SG CYS 130 B CYS 130 1_555 B SG CYS 144 B CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 B SG CYS 191 B CYS 191 1_555 B SG CYS 202 B CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 C SG CYS 130 C CYS 130 1_555 C SG CYS 144 C CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf6 C SG CYS 191 C CYS 191 1_555 C SG CYS 202 C CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf7 D SG CYS 130 D CYS 130 1_555 D SG CYS 144 D CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf8 D SG CYS 191 D CYS 191 1_555 D SG CYS 202 D CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf9 E SG CYS 130 E CYS 130 1_555 E SG CYS 144 E CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf10 E SG CYS 191 E CYS 191 1_555 E SG CYS 202 E CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf11 F SG CYS 22 F CYS 22 1_555 F SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf12 F SG CYS 149 F CYS 149 1_555 F SG CYS 204 F CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf13 G SG CYS 22 G CYS 22 1_555 G SG CYS 96 G CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf14 G SG CYS 149 G CYS 149 1_555 G SG CYS 204 G CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf15 H SG CYS 22 H CYS 22 1_555 H SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf16 H SG CYS 149 H CYS 149 1_555 H SG CYS 204 H CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf17 I SG CYS 22 I CYS 22 1_555 I SG CYS 96 I CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf18 I SG CYS 149 I CYS 149 1_555 I SG CYS 204 I CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf19 J SG CYS 22 J CYS 22 1_555 J SG CYS 96 J CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf20 J SG CYS 149 J CYS 149 1_555 J SG CYS 204 J CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf21 K SG CYS 22 K CYS 22 1_555 K SG CYS 90 K CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf22 K SG CYS 137 K CYS 137 1_555 K SG CYS 196 K CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf23 L SG CYS 22 L CYS 22 1_555 L SG CYS 90 L CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf24 L SG CYS 137 L CYS 137 1_555 L SG CYS 196 L CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf25 M SG CYS 22 M CYS 22 1_555 M SG CYS 90 M CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf26 M SG CYS 137 M CYS 137 1_555 M SG CYS 196 M CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf27 N SG CYS 22 N CYS 22 1_555 N SG CYS 90 N CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf28 O SG CYS 22 O CYS 22 1_555 O SG CYS 90 O CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf29 O SG CYS 137 O CYS 137 1_555 O SG CYS 196 O CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 B ND2 ASN 185 B ASN 185 1_555 S C1 NAG . B NAG 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.477 ? covale ? covale2 C ND2 ASN 185 C ASN 185 1_555 Y C1 NAG . C NAG 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.485 ? covale ? covale3 E ND2 ASN 185 E ASN 185 1_555 DA C1 NAG . E NAG 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.49 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 334 n n C1B O1B LMT sing 335 n n C1B O5B LMT sing 336 n n C1B H1B LMT sing 337 n n C2B C3B LMT sing 338 n n C2B O2B LMT sing 339 n n C2B H2B LMT sing 340 n n C3B C4B LMT sing 341 n n C3B O3B LMT sing 342 n n C3B H3B LMT sing 343 n n C4B C5B LMT sing 344 n n C4B O4' LMT sing 345 n n C4B H4B LMT sing 346 n n C5B C6B LMT sing 347 n n C5B O5B LMT sing 348 n n C5B H5B LMT sing 349 n n C6B O6B LMT sing 350 n n C6B "H6'2" LMT sing 351 n n C6B "H6'1" LMT sing 352 n n O1B C4' LMT sing 353 n n O2B H2O1 LMT sing 354 n n O3B H3O1 LMT sing 355 n n O4' H4O1 LMT sing 356 n n O6B H6B LMT sing 357 n n C1' C2' LMT sing 358 n n C1' O1' LMT sing 359 n n C1' O5' LMT sing 360 n n C1' H1' LMT sing 361 n n C2' C3' LMT sing 362 n n C2' O2' LMT sing 363 n n C2' H2' LMT sing 364 n n C3' C4' LMT sing 365 n n C3' O3' LMT sing 366 n n C3' H3' LMT sing 367 n n C4' C5' LMT sing 368 n n C4' H4' LMT sing 369 n n C5' C6' LMT sing 370 n n C5' O5' LMT sing 371 n n C5' H5' LMT sing 372 n n C6' O6' LMT sing 373 n n C6' H6D LMT sing 374 n n C6' H6E LMT sing 375 n n O1' C1 LMT sing 376 n n O2' H2O2 LMT sing 377 n n O3' H3O2 LMT sing 378 n n O6' H6' LMT sing 379 n n C1 C2 LMT sing 380 n n C1 H12 LMT sing 381 n n C1 H11 LMT sing 382 n n C2 C3 LMT sing 383 n n C2 H22 LMT sing 384 n n C2 H21 LMT sing 385 n n C3 C4 LMT sing 386 n n C3 H32 LMT sing 387 n n C3 H31 LMT sing 388 n n C4 C5 LMT sing 389 n n C4 H42 LMT sing 390 n n C4 H41 LMT sing 391 n n C5 C6 LMT sing 392 n n C5 H52 LMT sing 393 n n C5 H51 LMT sing 394 n n C6 C7 LMT sing 395 n n C6 H62 LMT sing 396 n n C6 H61 LMT sing 397 n n C7 C8 LMT sing 398 n n C7 H72 LMT sing 399 n n C7 H71 LMT sing 400 n n C8 C9 LMT sing 401 n n C8 H82 LMT sing 402 n n C8 H81 LMT sing 403 n n C9 C10 LMT sing 404 n n C9 H92 LMT sing 405 n n C9 H91 LMT sing 406 n n C10 C11 LMT sing 407 n n C10 H102 LMT sing 408 n n C10 H101 LMT sing 409 n n C11 C12 LMT sing 410 n n C11 H112 LMT sing 411 n n C11 H111 LMT sing 412 n n C12 H123 LMT sing 413 n n C12 H122 LMT sing 414 n n C12 H121 LMT sing 415 n n # _atom_sites.entry_id 3RHW _atom_sites.fract_transf_matrix[1][1] 0.006458 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006458 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00174 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code P 4 IVM A 1 348 1 IVM IVM . Q 5 LMT A 1 349 1 LMT LMT . R 5 LMT A 1 350 1 LMT LMT . S 6 NAG B 1 400 400 NAG NAG . T 4 IVM B 1 348 1 IVM IVM . U 4 IVM B 1 349 1 IVM IVM . V 5 LMT B 1 350 1 LMT LMT . W 7 OCT B 1 351 1 OCT OCT . X 8 UND B 1 352 1 UND UND . Y 6 NAG C 1 400 400 NAG NAG . Z 9 CL C 1 348 1 CL CL . AA 4 IVM D 1 348 1 IVM IVM . BA 4 IVM D 1 349 1 IVM IVM . CA 7 OCT D 1 350 1 OCT OCT . DA 6 NAG E 1 400 400 NAG NAG . EA 7 OCT E 1 348 1 OCT OCT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . R 5 -12.598 86.974 32.756 1 149.84 ? C1B LMT 350 A 1 HETATM 2 C C2B LMT . . . R 5 -11.875 85.628 32.574 1 149.84 ? C2B LMT 350 A 1 HETATM 3 C C3B LMT . . . R 5 -12.735 84.74 31.825 1 149.84 ? C3B LMT 350 A 1 HETATM 4 C C4B LMT . . . R 5 -13.974 84.531 32.496 1 149.84 ? C4B LMT 350 A 1 HETATM 5 C C5B LMT . . . R 5 -14.668 85.854 32.784 1 149.84 ? C5B LMT 350 A 1 HETATM 6 C C6B LMT . . . R 5 -15.986 85.706 33.513 1 149.84 ? C6B LMT 350 A 1 HETATM 7 O O1B LMT . . . R 5 -12.923 87.516 31.494 1 149.84 ? O1B LMT 350 A 1 HETATM 8 O O2B LMT . . . R 5 -10.714 85.746 31.827 1 149.84 ? O2B LMT 350 A 1 HETATM 9 O O3B LMT . . . R 5 -12.084 83.492 31.745 1 149.84 ? O3B LMT 350 A 1 HETATM 10 O O4' LMT . . . R 5 -14.788 83.762 31.668 1 149.84 ? O4' LMT 350 A 1 HETATM 11 O O5B LMT . . . R 5 -13.779 86.802 33.479 1 149.84 ? O5B LMT 350 A 1 HETATM 12 O O6B LMT . . . R 5 -16.737 86.862 33.695 1 149.84 ? O6B LMT 350 A 1 HETATM 13 C C1' LMT . . . R 5 -11.91 90.832 29.344 1 149.84 ? C1' LMT 350 A 1 HETATM 14 C C2' LMT . . . R 5 -10.928 89.685 29.387 1 149.84 ? C2' LMT 350 A 1 HETATM 15 C C3' LMT . . . R 5 -11.526 88.465 29.944 1 149.84 ? C3' LMT 350 A 1 HETATM 16 C C4' LMT . . . R 5 -12.137 88.677 31.196 1 149.84 ? C4' LMT 350 A 1 HETATM 17 C C5' LMT . . . R 5 -13.086 89.837 31.194 1 149.84 ? C5' LMT 350 A 1 HETATM 18 C C6' LMT . . . R 5 -13.62 90.157 32.575 1 149.84 ? C6' LMT 350 A 1 HETATM 19 O O1' LMT . . . R 5 -11.251 91.999 28.926 1 149.84 ? O1' LMT 350 A 1 HETATM 20 O O2' LMT . . . R 5 -10.526 89.395 28.105 1 149.84 ? O2' LMT 350 A 1 HETATM 21 O O3' LMT . . . R 5 -10.436 87.615 30.096 1 149.84 ? O3' LMT 350 A 1 HETATM 22 O O5' LMT . . . R 5 -12.517 91.062 30.582 1 149.84 ? O5' LMT 350 A 1 HETATM 23 O O6' LMT . . . R 5 -14.149 91.414 32.792 1 149.84 ? O6' LMT 350 A 1 HETATM 24 C C1 LMT . . . R 5 -10.689 92.832 29.926 1 149.84 ? C1 LMT 350 A 1 HETATM 25 C C2 LMT . . . R 5 -9.335 93.514 29.65 1 149.84 ? C2 LMT 350 A 1 HETATM 26 C C3 LMT . . . R 5 -9.35 94.841 28.902 1 149.84 ? C3 LMT 350 A 1 HETATM 27 C C4 LMT . . . R 5 -8.216 95.806 29.182 1 149.84 ? C4 LMT 350 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 86 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 27 #