data_3RJO # _model_server_result.job_id 85IgAfO0JTfqgSQ4FspUxQ _model_server_result.datetime_utc '2024-12-21 15:50:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rjo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2}' # _entry.id 3RJO # _exptl.entry_id 3RJO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.25 _cell.angle_gamma 90 _cell.entry_id 3RJO _cell.length_a 63.84 _cell.length_b 67.31 _cell.length_c 65.92 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RJO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 208 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 736 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 215 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 743 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id B _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.075 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3RJO _atom_sites.fract_transf_matrix[1][1] 0.015664 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005779 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014857 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016169 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 1 1 EDO EDO . C 2 EDO A 1 2 2 EDO EDO . D 3 HOH A 1 3 3 HOH HOH . D 3 HOH A 2 4 4 HOH HOH . D 3 HOH A 3 5 5 HOH HOH . D 3 HOH A 4 7 7 HOH HOH . D 3 HOH A 5 8 8 HOH HOH . D 3 HOH A 6 10 10 HOH HOH . D 3 HOH A 7 11 11 HOH HOH . D 3 HOH A 8 12 12 HOH HOH . D 3 HOH A 9 14 14 HOH HOH . D 3 HOH A 10 15 15 HOH HOH . D 3 HOH A 11 16 16 HOH HOH . D 3 HOH A 12 17 17 HOH HOH . D 3 HOH A 13 18 18 HOH HOH . D 3 HOH A 14 19 19 HOH HOH . D 3 HOH A 15 20 20 HOH HOH . D 3 HOH A 16 22 22 HOH HOH . D 3 HOH A 17 23 23 HOH HOH . D 3 HOH A 18 25 25 HOH HOH . D 3 HOH A 19 26 26 HOH HOH . D 3 HOH A 20 27 27 HOH HOH . D 3 HOH A 21 29 29 HOH HOH . D 3 HOH A 22 30 30 HOH HOH . D 3 HOH A 23 31 31 HOH HOH . D 3 HOH A 24 33 33 HOH HOH . D 3 HOH A 25 34 34 HOH HOH . D 3 HOH A 26 35 35 HOH HOH . D 3 HOH A 27 37 37 HOH HOH . D 3 HOH A 28 38 38 HOH HOH . D 3 HOH A 29 39 39 HOH HOH . D 3 HOH A 30 40 40 HOH HOH . D 3 HOH A 31 41 41 HOH HOH . D 3 HOH A 32 42 42 HOH HOH . D 3 HOH A 33 43 43 HOH HOH . D 3 HOH A 34 44 44 HOH HOH . D 3 HOH A 35 45 45 HOH HOH . D 3 HOH A 36 46 46 HOH HOH . D 3 HOH A 37 48 48 HOH HOH . D 3 HOH A 38 49 49 HOH HOH . D 3 HOH A 39 50 50 HOH HOH . D 3 HOH A 40 51 51 HOH HOH . D 3 HOH A 41 52 52 HOH HOH . D 3 HOH A 42 53 53 HOH HOH . D 3 HOH A 43 55 55 HOH HOH . D 3 HOH A 44 56 56 HOH HOH . D 3 HOH A 45 58 58 HOH HOH . D 3 HOH A 46 59 59 HOH HOH . D 3 HOH A 47 60 60 HOH HOH . D 3 HOH A 48 61 61 HOH HOH . D 3 HOH A 49 63 63 HOH HOH . D 3 HOH A 50 64 64 HOH HOH . D 3 HOH A 51 66 66 HOH HOH . D 3 HOH A 52 69 69 HOH HOH . D 3 HOH A 53 70 70 HOH HOH . D 3 HOH A 54 71 71 HOH HOH . D 3 HOH A 55 72 72 HOH HOH . D 3 HOH A 56 73 73 HOH HOH . D 3 HOH A 57 74 74 HOH HOH . D 3 HOH A 58 76 76 HOH HOH . D 3 HOH A 59 78 78 HOH HOH . D 3 HOH A 60 79 79 HOH HOH . D 3 HOH A 61 81 81 HOH HOH . D 3 HOH A 62 83 83 HOH HOH . D 3 HOH A 63 84 84 HOH HOH . D 3 HOH A 64 85 85 HOH HOH . D 3 HOH A 65 86 86 HOH HOH . D 3 HOH A 66 87 87 HOH HOH . D 3 HOH A 67 88 88 HOH HOH . D 3 HOH A 68 89 89 HOH HOH . D 3 HOH A 69 90 90 HOH HOH . D 3 HOH A 70 92 92 HOH HOH . D 3 HOH A 71 93 93 HOH HOH . D 3 HOH A 72 94 94 HOH HOH . D 3 HOH A 73 95 95 HOH HOH . D 3 HOH A 74 96 96 HOH HOH . D 3 HOH A 75 97 97 HOH HOH . D 3 HOH A 76 98 98 HOH HOH . D 3 HOH A 77 99 99 HOH HOH . D 3 HOH A 78 100 100 HOH HOH . D 3 HOH A 79 101 101 HOH HOH . D 3 HOH A 80 102 102 HOH HOH . D 3 HOH A 81 103 103 HOH HOH . D 3 HOH A 82 104 104 HOH HOH . D 3 HOH A 83 105 105 HOH HOH . D 3 HOH A 84 106 106 HOH HOH . D 3 HOH A 85 107 107 HOH HOH . D 3 HOH A 86 108 108 HOH HOH . D 3 HOH A 87 109 109 HOH HOH . D 3 HOH A 88 111 111 HOH HOH . D 3 HOH A 89 112 112 HOH HOH . D 3 HOH A 90 113 113 HOH HOH . D 3 HOH A 91 114 114 HOH HOH . D 3 HOH A 92 115 115 HOH HOH . D 3 HOH A 93 116 116 HOH HOH . D 3 HOH A 94 119 119 HOH HOH . D 3 HOH A 95 120 120 HOH HOH . D 3 HOH A 96 121 121 HOH HOH . D 3 HOH A 97 124 124 HOH HOH . D 3 HOH A 98 125 125 HOH HOH . D 3 HOH A 99 126 126 HOH HOH . D 3 HOH A 100 127 127 HOH HOH . D 3 HOH A 101 128 128 HOH HOH . D 3 HOH A 102 129 129 HOH HOH . D 3 HOH A 103 130 130 HOH HOH . D 3 HOH A 104 131 131 HOH HOH . D 3 HOH A 105 132 132 HOH HOH . D 3 HOH A 106 133 133 HOH HOH . D 3 HOH A 107 134 134 HOH HOH . D 3 HOH A 108 135 135 HOH HOH . D 3 HOH A 109 136 136 HOH HOH . D 3 HOH A 110 137 137 HOH HOH . D 3 HOH A 111 138 138 HOH HOH . D 3 HOH A 112 139 139 HOH HOH . D 3 HOH A 113 140 140 HOH HOH . D 3 HOH A 114 141 141 HOH HOH . D 3 HOH A 115 142 142 HOH HOH . D 3 HOH A 116 143 143 HOH HOH . D 3 HOH A 117 145 145 HOH HOH . D 3 HOH A 118 146 146 HOH HOH . D 3 HOH A 119 148 148 HOH HOH . D 3 HOH A 120 149 149 HOH HOH . D 3 HOH A 121 150 150 HOH HOH . D 3 HOH A 122 151 151 HOH HOH . D 3 HOH A 123 152 152 HOH HOH . D 3 HOH A 124 153 153 HOH HOH . D 3 HOH A 125 154 154 HOH HOH . D 3 HOH A 126 159 159 HOH HOH . D 3 HOH A 127 160 160 HOH HOH . D 3 HOH A 128 161 161 HOH HOH . D 3 HOH A 129 162 162 HOH HOH . D 3 HOH A 130 164 164 HOH HOH . D 3 HOH A 131 166 166 HOH HOH . D 3 HOH A 132 167 167 HOH HOH . D 3 HOH A 133 168 168 HOH HOH . D 3 HOH A 134 169 169 HOH HOH . D 3 HOH A 135 171 171 HOH HOH . D 3 HOH A 136 172 172 HOH HOH . D 3 HOH A 137 173 173 HOH HOH . D 3 HOH A 138 176 176 HOH HOH . D 3 HOH A 139 177 177 HOH HOH . D 3 HOH A 140 178 178 HOH HOH . D 3 HOH A 141 182 182 HOH HOH . D 3 HOH A 142 189 189 HOH HOH . D 3 HOH A 143 190 190 HOH HOH . D 3 HOH A 144 191 191 HOH HOH . D 3 HOH A 145 948 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 22.018 19.684 39.581 1 38 ? C1 EDO 2 A 1 HETATM 2 O O1 EDO . . . C 2 21.264 19.392 40.744 1 38.63 ? O1 EDO 2 A 1 HETATM 3 C C2 EDO . . . C 2 23.406 19.095 39.694 1 42.93 ? C2 EDO 2 A 1 HETATM 4 O O2 EDO . . . C 2 23.775 18.622 38.382 1 43.78 ? O2 EDO 2 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #