data_3RKK # _model_server_result.job_id Pr-1E_NjlJa1ErPrN0Zt5w _model_server_result.datetime_utc '2024-11-24 17:24:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rkk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":287}' # _entry.id 3RKK # _exptl.entry_id 3RKK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.98 _cell.angle_gamma 90 _cell.entry_id 3RKK _cell.length_a 59.76 _cell.length_b 50.862 _cell.length_c 70.717 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RKK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,P 1 1 B,J,K,L,M,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id O _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 3RKK _atom_sites.fract_transf_matrix[1][1] 0.016734 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00511 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014786 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 281 281 SO4 SO4 . D 2 SO4 A 1 282 282 SO4 SO4 . E 2 SO4 A 1 283 283 SO4 SO4 . F 3 GOL A 1 284 284 GOL GOL . G 3 GOL A 1 285 285 GOL GOL . H 3 GOL A 1 286 286 GOL GOL . I 3 GOL A 1 271 271 GOL GOL . J 2 SO4 B 1 281 281 SO4 SO4 . K 2 SO4 B 1 282 282 SO4 SO4 . L 2 SO4 B 1 283 283 SO4 SO4 . M 3 GOL B 1 285 285 GOL GOL . N 3 GOL B 1 286 286 GOL GOL . O 4 ACY B 1 287 287 ACY ACY . P 5 HOH A 1 1 1 HOH HOH . P 5 HOH A 2 2 2 HOH HOH . P 5 HOH A 3 3 3 HOH HOH . P 5 HOH A 4 4 4 HOH HOH . P 5 HOH A 5 5 5 HOH HOH . P 5 HOH A 6 6 6 HOH HOH . P 5 HOH A 7 7 7 HOH HOH . P 5 HOH A 8 8 8 HOH HOH . P 5 HOH A 9 9 9 HOH HOH . P 5 HOH A 10 10 10 HOH HOH . P 5 HOH A 11 11 11 HOH HOH . P 5 HOH A 12 12 12 HOH HOH . P 5 HOH A 13 13 13 HOH HOH . P 5 HOH A 14 14 14 HOH HOH . P 5 HOH A 15 15 15 HOH HOH . P 5 HOH A 16 16 16 HOH HOH . P 5 HOH A 17 17 17 HOH HOH . P 5 HOH A 18 18 18 HOH HOH . P 5 HOH A 19 19 19 HOH HOH . P 5 HOH A 20 20 20 HOH HOH . P 5 HOH A 21 21 21 HOH HOH . P 5 HOH A 22 22 22 HOH HOH . P 5 HOH A 23 23 23 HOH HOH . P 5 HOH A 24 24 24 HOH HOH . P 5 HOH A 25 25 25 HOH HOH . P 5 HOH A 26 26 26 HOH HOH . P 5 HOH A 27 27 27 HOH HOH . P 5 HOH A 28 272 272 HOH HOH . P 5 HOH A 29 273 273 HOH HOH . P 5 HOH A 30 274 274 HOH HOH . P 5 HOH A 31 275 275 HOH HOH . P 5 HOH A 32 276 276 HOH HOH . P 5 HOH A 33 277 277 HOH HOH . P 5 HOH A 34 278 278 HOH HOH . P 5 HOH A 35 279 279 HOH HOH . P 5 HOH A 36 280 280 HOH HOH . P 5 HOH A 37 287 287 HOH HOH . P 5 HOH A 38 288 288 HOH HOH . P 5 HOH A 39 289 289 HOH HOH . P 5 HOH A 40 290 290 HOH HOH . P 5 HOH A 41 291 291 HOH HOH . P 5 HOH A 42 292 292 HOH HOH . P 5 HOH A 43 293 293 HOH HOH . P 5 HOH A 44 294 294 HOH HOH . P 5 HOH A 45 295 295 HOH HOH . P 5 HOH A 46 296 296 HOH HOH . P 5 HOH A 47 297 297 HOH HOH . P 5 HOH A 48 298 298 HOH HOH . P 5 HOH A 49 299 299 HOH HOH . P 5 HOH A 50 300 300 HOH HOH . P 5 HOH A 51 301 301 HOH HOH . P 5 HOH A 52 302 302 HOH HOH . P 5 HOH A 53 303 303 HOH HOH . P 5 HOH A 54 304 304 HOH HOH . P 5 HOH A 55 305 305 HOH HOH . P 5 HOH A 56 306 306 HOH HOH . P 5 HOH A 57 307 307 HOH HOH . P 5 HOH A 58 308 308 HOH HOH . P 5 HOH A 59 309 309 HOH HOH . P 5 HOH A 60 310 310 HOH HOH . P 5 HOH A 61 311 311 HOH HOH . P 5 HOH A 62 312 312 HOH HOH . P 5 HOH A 63 313 313 HOH HOH . P 5 HOH A 64 314 314 HOH HOH . P 5 HOH A 65 315 315 HOH HOH . P 5 HOH A 66 316 316 HOH HOH . P 5 HOH A 67 317 317 HOH HOH . P 5 HOH A 68 318 318 HOH HOH . P 5 HOH A 69 319 319 HOH HOH . P 5 HOH A 70 320 320 HOH HOH . P 5 HOH A 71 321 321 HOH HOH . P 5 HOH A 72 322 322 HOH HOH . P 5 HOH A 73 323 323 HOH HOH . P 5 HOH A 74 324 324 HOH HOH . P 5 HOH A 75 325 325 HOH HOH . P 5 HOH A 76 326 326 HOH HOH . P 5 HOH A 77 327 327 HOH HOH . P 5 HOH A 78 328 328 HOH HOH . P 5 HOH A 79 329 329 HOH HOH . P 5 HOH A 80 330 330 HOH HOH . P 5 HOH A 81 331 331 HOH HOH . P 5 HOH A 82 332 332 HOH HOH . P 5 HOH A 83 333 333 HOH HOH . P 5 HOH A 84 334 334 HOH HOH . P 5 HOH A 85 335 335 HOH HOH . P 5 HOH A 86 336 336 HOH HOH . Q 5 HOH B 1 28 28 HOH HOH . Q 5 HOH B 2 29 29 HOH HOH . Q 5 HOH B 3 30 30 HOH HOH . Q 5 HOH B 4 31 31 HOH HOH . Q 5 HOH B 5 32 32 HOH HOH . Q 5 HOH B 6 33 33 HOH HOH . Q 5 HOH B 7 271 271 HOH HOH . Q 5 HOH B 8 272 272 HOH HOH . Q 5 HOH B 9 273 273 HOH HOH . Q 5 HOH B 10 274 274 HOH HOH . Q 5 HOH B 11 275 275 HOH HOH . Q 5 HOH B 12 276 276 HOH HOH . Q 5 HOH B 13 277 277 HOH HOH . Q 5 HOH B 14 278 278 HOH HOH . Q 5 HOH B 15 279 279 HOH HOH . Q 5 HOH B 16 280 280 HOH HOH . Q 5 HOH B 17 284 284 HOH HOH . Q 5 HOH B 18 288 288 HOH HOH . Q 5 HOH B 19 289 289 HOH HOH . Q 5 HOH B 20 290 290 HOH HOH . Q 5 HOH B 21 291 291 HOH HOH . Q 5 HOH B 22 292 292 HOH HOH . Q 5 HOH B 23 293 293 HOH HOH . Q 5 HOH B 24 294 294 HOH HOH . Q 5 HOH B 25 295 295 HOH HOH . Q 5 HOH B 26 296 296 HOH HOH . Q 5 HOH B 27 297 297 HOH HOH . Q 5 HOH B 28 298 298 HOH HOH . Q 5 HOH B 29 299 299 HOH HOH . Q 5 HOH B 30 300 300 HOH HOH . Q 5 HOH B 31 301 301 HOH HOH . Q 5 HOH B 32 302 302 HOH HOH . Q 5 HOH B 33 303 303 HOH HOH . Q 5 HOH B 34 304 304 HOH HOH . Q 5 HOH B 35 305 305 HOH HOH . Q 5 HOH B 36 306 306 HOH HOH . Q 5 HOH B 37 307 307 HOH HOH . Q 5 HOH B 38 308 308 HOH HOH . Q 5 HOH B 39 309 309 HOH HOH . Q 5 HOH B 40 310 310 HOH HOH . Q 5 HOH B 41 311 311 HOH HOH . Q 5 HOH B 42 312 312 HOH HOH . Q 5 HOH B 43 313 313 HOH HOH . Q 5 HOH B 44 314 314 HOH HOH . Q 5 HOH B 45 315 315 HOH HOH . Q 5 HOH B 46 316 316 HOH HOH . Q 5 HOH B 47 317 317 HOH HOH . Q 5 HOH B 48 318 318 HOH HOH . Q 5 HOH B 49 319 319 HOH HOH . Q 5 HOH B 50 320 320 HOH HOH . Q 5 HOH B 51 321 321 HOH HOH . Q 5 HOH B 52 322 322 HOH HOH . Q 5 HOH B 53 323 323 HOH HOH . Q 5 HOH B 54 324 324 HOH HOH . Q 5 HOH B 55 325 325 HOH HOH . Q 5 HOH B 56 326 326 HOH HOH . Q 5 HOH B 57 327 327 HOH HOH . Q 5 HOH B 58 328 328 HOH HOH . Q 5 HOH B 59 329 329 HOH HOH . Q 5 HOH B 60 330 330 HOH HOH . Q 5 HOH B 61 331 331 HOH HOH . Q 5 HOH B 62 332 332 HOH HOH . Q 5 HOH B 63 333 333 HOH HOH . Q 5 HOH B 64 334 334 HOH HOH . Q 5 HOH B 65 335 335 HOH HOH . Q 5 HOH B 66 336 336 HOH HOH . Q 5 HOH B 67 337 337 HOH HOH . Q 5 HOH B 68 338 338 HOH HOH . Q 5 HOH B 69 339 339 HOH HOH . Q 5 HOH B 70 340 340 HOH HOH . Q 5 HOH B 71 341 341 HOH HOH . Q 5 HOH B 72 342 342 HOH HOH . Q 5 HOH B 73 343 343 HOH HOH . Q 5 HOH B 74 344 344 HOH HOH . Q 5 HOH B 75 345 345 HOH HOH . Q 5 HOH B 76 346 346 HOH HOH . Q 5 HOH B 77 347 347 HOH HOH . Q 5 HOH B 78 348 348 HOH HOH . Q 5 HOH B 79 349 349 HOH HOH . Q 5 HOH B 80 350 350 HOH HOH . Q 5 HOH B 81 351 351 HOH HOH . Q 5 HOH B 82 352 352 HOH HOH . Q 5 HOH B 83 353 353 HOH HOH . Q 5 HOH B 84 354 354 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . O 4 11.257 -24.286 5.504 1 46.11 ? C ACY 287 B 1 HETATM 2 O O ACY . . . O 4 10.047 -24.377 5.054 1 39.45 ? O ACY 287 B 1 HETATM 3 O OXT ACY . . . O 4 12.342 -23.91 4.858 1 44.6 ? OXT ACY 287 B 1 HETATM 4 C CH3 ACY . . . O 4 11.447 -24.661 6.963 1 40.11 ? CH3 ACY 287 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #