data_3RKO # _model_server_result.job_id d29_bTH-Yt-J5N4J34EGpQ _model_server_result.datetime_utc '2024-11-01 06:35:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rko # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":488}' # _entry.id 3RKO # _exptl.entry_id 3RKO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 18 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 98.51 _cell.angle_beta 104.08 _cell.angle_gamma 108.51 _cell.entry_id 3RKO _cell.length_a 94.98 _cell.length_b 116.57 _cell.length_c 191.37 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RKO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA hexameric 6 author_and_software_defined_assembly 1 PISA hexameric 6 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,M,N,O,P,Q,R,S,T,U,V,GA,HA,IA,JA 1 1 G,H,I,J,K,L,W,X,Y,Z,AA,BA,CA,DA,EA,FA,KA,LA,MA,NA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 M N N ? 7 N N N ? 7 O N N ? 7 Q N N ? 7 R N N ? 7 S N N ? 7 T N N ? 7 U N N ? 7 V N N ? 7 W N N ? 7 X N N ? 7 Y N N ? 7 AA N N ? 7 BA N N ? 7 CA N N ? 7 DA N N ? 7 EA N N ? 7 FA N N # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 278 n n C1 H11 LFA sing 279 n n C1 H12 LFA sing 280 n n C1 H13 LFA sing 281 n n C2 C3 LFA sing 282 n n C2 H21 LFA sing 283 n n C2 H22 LFA sing 284 n n C3 C4 LFA sing 285 n n C3 H31 LFA sing 286 n n C3 H32 LFA sing 287 n n C4 C5 LFA sing 288 n n C4 H41 LFA sing 289 n n C4 H42 LFA sing 290 n n C5 C6 LFA sing 291 n n C5 H51 LFA sing 292 n n C5 H52 LFA sing 293 n n C6 C7 LFA sing 294 n n C6 H61 LFA sing 295 n n C6 H62 LFA sing 296 n n C7 C8 LFA sing 297 n n C7 H71 LFA sing 298 n n C7 H72 LFA sing 299 n n C8 C9 LFA sing 300 n n C8 H81 LFA sing 301 n n C8 H82 LFA sing 302 n n C9 C10 LFA sing 303 n n C9 H91 LFA sing 304 n n C9 H92 LFA sing 305 n n C10 C11 LFA sing 306 n n C10 H101 LFA sing 307 n n C10 H102 LFA sing 308 n n C11 C12 LFA sing 309 n n C11 H111 LFA sing 310 n n C11 H112 LFA sing 311 n n C12 C13 LFA sing 312 n n C12 H121 LFA sing 313 n n C12 H122 LFA sing 314 n n C13 C14 LFA sing 315 n n C13 H131 LFA sing 316 n n C13 H132 LFA sing 317 n n C14 C15 LFA sing 318 n n C14 H141 LFA sing 319 n n C14 H142 LFA sing 320 n n C15 C16 LFA sing 321 n n C15 H151 LFA sing 322 n n C15 H152 LFA sing 323 n n C16 C17 LFA sing 324 n n C16 H161 LFA sing 325 n n C16 H162 LFA sing 326 n n C17 C18 LFA sing 327 n n C17 H171 LFA sing 328 n n C17 H172 LFA sing 329 n n C18 C19 LFA sing 330 n n C18 H181 LFA sing 331 n n C18 H182 LFA sing 332 n n C19 C20 LFA sing 333 n n C19 H191 LFA sing 334 n n C19 H192 LFA sing 335 n n C20 H201 LFA sing 336 n n C20 H202 LFA sing 337 n n C20 H203 LFA sing 338 n n # _atom_sites.entry_id 3RKO _atom_sites.fract_transf_matrix[1][1] 0.010529 _atom_sites.fract_transf_matrix[1][2] 0.003525 _atom_sites.fract_transf_matrix[1][3] 0.003614 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009047 _atom_sites.fract_transf_matrix[2][3] 0.002285 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005556 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 7 LFA L 1 614 2 LFA LFA . N 7 LFA L 1 615 7 LFA LFA . O 7 LFA L 1 616 9 LFA LFA . P 8 CA7 M 1 510 1 CA7 CA7 . Q 7 LFA M 1 511 3 LFA LFA . R 7 LFA M 1 512 8 LFA LFA . S 7 LFA N 1 486 4 LFA LFA . T 7 LFA N 1 487 5 LFA LFA . U 7 LFA N 1 488 6 LFA LFA . V 7 LFA N 1 489 14 LFA LFA . W 7 LFA B 1 614 2 LFA LFA . X 7 LFA B 1 615 7 LFA LFA . Y 7 LFA B 1 616 9 LFA LFA . Z 8 CA7 C 1 510 1 CA7 CA7 . AA 7 LFA C 1 511 3 LFA LFA . BA 7 LFA C 1 512 4 LFA LFA . CA 7 LFA C 1 513 8 LFA LFA . DA 7 LFA D 1 486 5 LFA LFA . EA 7 LFA D 1 487 6 LFA LFA . FA 7 LFA D 1 488 14 LFA LFA . GA 9 HOH L 1 617 2 HOH HOH . GA 9 HOH L 2 618 3 HOH HOH . HA 9 HOH M 1 513 5 HOH HOH . HA 9 HOH M 2 514 6 HOH HOH . IA 9 HOH N 1 490 7 HOH HOH . IA 9 HOH N 2 491 8 HOH HOH . IA 9 HOH N 3 492 9 HOH HOH . JA 9 HOH K 1 101 10 HOH HOH . KA 9 HOH B 1 617 2 HOH HOH . KA 9 HOH B 2 618 3 HOH HOH . LA 9 HOH C 1 514 5 HOH HOH . LA 9 HOH C 2 515 6 HOH HOH . MA 9 HOH D 1 489 7 HOH HOH . MA 9 HOH D 2 490 8 HOH HOH . MA 9 HOH D 3 491 9 HOH HOH . NA 9 HOH G 1 101 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LFA . . . U 7 -12.04 11.73 -17.934 1 38.39 ? C1 LFA 488 N 1 HETATM 2 C C2 LFA . . . U 7 -11.709 10.652 -18.982 1 22.07 ? C2 LFA 488 N 1 HETATM 3 C C3 LFA . . . U 7 -11.107 9.427 -18.283 1 50.59 ? C3 LFA 488 N 1 HETATM 4 C C4 LFA . . . U 7 -10.748 8.293 -19.25 1 64.61 ? C4 LFA 488 N 1 HETATM 5 C C5 LFA . . . U 7 -10.144 7.086 -18.502 1 29.87 ? C5 LFA 488 N 1 HETATM 6 C C6 LFA . . . U 7 -9.797 5.977 -19.509 1 94.83 ? C6 LFA 488 N 1 HETATM 7 C C7 LFA . . . U 7 -9.185 4.709 -18.891 1 50.48 ? C7 LFA 488 N 1 HETATM 8 C C8 LFA . . . U 7 -8.893 3.683 -19.999 1 25.3 ? C8 LFA 488 N 1 HETATM 9 C C9 LFA . . . U 7 -8.282 2.39 -19.45 1 102.5 ? C9 LFA 488 N 1 HETATM 10 C C10 LFA . . . U 7 -8.019 1.371 -20.564 1 44.24 ? C10 LFA 488 N 1 HETATM 11 C C11 LFA . . . U 7 -7.41 0.081 -19.988 1 63.9 ? C11 LFA 488 N 1 HETATM 12 C C12 LFA . . . U 7 -7.149 -0.954 -21.095 1 63.09 ? C12 LFA 488 N 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 12 #