data_3RKR # _model_server_result.job_id 6ghx-kVa_J5rcwgRf1zmKw _model_server_result.datetime_utc '2024-12-22 06:28:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rkr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":241}' # _entry.id 3RKR # _exptl.entry_id 3RKR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RKR _cell.length_a 243.167 _cell.length_b 243.167 _cell.length_c 151.549 _cell.Z_PDB 64 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RKR _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,P,Q,R,S,T,W 1 1,2 B,C,I,J,K,L,M,N,O,U,V 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 15_544 y+1/2,x-1/2,-z-1/2 0 1 0 1 0 0 0 0 -1 121.5835 -121.5835 -75.7745 3 'crystal symmetry operation' 5_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 0 0 -151.549 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 370 n n S O2 SO4 doub 371 n n S O3 SO4 sing 372 n n S O4 SO4 sing 373 n n # _atom_sites.entry_id 3RKR _atom_sites.fract_transf_matrix[1][1] 0.004112 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006599 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAP A 1 240 1 NAP NAP . F 3 SO4 A 1 241 2 SO4 SO4 . G 3 SO4 A 1 242 5 SO4 SO4 . H 3 SO4 A 1 243 14 SO4 SO4 . I 2 NAP B 1 240 1 NAP NAP . J 3 SO4 B 1 241 6 SO4 SO4 . K 3 SO4 B 1 242 15 SO4 SO4 . L 3 SO4 B 1 243 16 SO4 SO4 . M 3 SO4 C 1 240 3 SO4 SO4 . N 3 SO4 C 1 241 7 SO4 SO4 . O 3 SO4 C 1 242 17 SO4 SO4 . P 3 SO4 D 1 240 8 SO4 SO4 . Q 3 SO4 D 1 241 11 SO4 SO4 . R 3 SO4 D 1 242 13 SO4 SO4 . S 3 SO4 D 1 243 18 SO4 SO4 . T 4 HOH A 1 244 5 HOH HOH . T 4 HOH A 2 245 6 HOH HOH . T 4 HOH A 3 246 10 HOH HOH . T 4 HOH A 4 247 11 HOH HOH . T 4 HOH A 5 248 248 HOH HOH . T 4 HOH A 6 249 249 HOH HOH . T 4 HOH A 7 250 250 HOH HOH . T 4 HOH A 8 251 12 HOH HOH . T 4 HOH A 9 252 13 HOH HOH . T 4 HOH A 10 253 14 HOH HOH . T 4 HOH A 11 254 16 HOH HOH . T 4 HOH A 12 255 19 HOH HOH . T 4 HOH A 13 256 27 HOH HOH . T 4 HOH A 14 257 29 HOH HOH . T 4 HOH A 15 258 31 HOH HOH . T 4 HOH A 16 259 33 HOH HOH . T 4 HOH A 17 260 36 HOH HOH . T 4 HOH A 18 261 44 HOH HOH . T 4 HOH A 19 262 50 HOH HOH . T 4 HOH A 20 263 51 HOH HOH . T 4 HOH A 21 264 53 HOH HOH . T 4 HOH A 22 265 56 HOH HOH . T 4 HOH A 23 266 57 HOH HOH . T 4 HOH A 24 267 58 HOH HOH . T 4 HOH A 25 268 61 HOH HOH . T 4 HOH A 26 269 65 HOH HOH . T 4 HOH A 27 270 67 HOH HOH . T 4 HOH A 28 271 69 HOH HOH . T 4 HOH A 29 272 71 HOH HOH . T 4 HOH A 30 273 75 HOH HOH . T 4 HOH A 31 274 76 HOH HOH . T 4 HOH A 32 275 77 HOH HOH . T 4 HOH A 33 276 81 HOH HOH . T 4 HOH A 34 277 84 HOH HOH . T 4 HOH A 35 278 92 HOH HOH . T 4 HOH A 36 279 94 HOH HOH . T 4 HOH A 37 280 95 HOH HOH . T 4 HOH A 38 281 99 HOH HOH . T 4 HOH A 39 282 101 HOH HOH . T 4 HOH A 40 283 106 HOH HOH . T 4 HOH A 41 284 116 HOH HOH . T 4 HOH A 42 285 118 HOH HOH . T 4 HOH A 43 286 131 HOH HOH . T 4 HOH A 44 287 135 HOH HOH . T 4 HOH A 45 288 137 HOH HOH . T 4 HOH A 46 289 144 HOH HOH . T 4 HOH A 47 290 145 HOH HOH . T 4 HOH A 48 291 147 HOH HOH . T 4 HOH A 49 292 156 HOH HOH . T 4 HOH A 50 293 158 HOH HOH . T 4 HOH A 51 294 166 HOH HOH . T 4 HOH A 52 295 167 HOH HOH . T 4 HOH A 53 296 168 HOH HOH . T 4 HOH A 54 297 174 HOH HOH . T 4 HOH A 55 298 175 HOH HOH . T 4 HOH A 56 299 179 HOH HOH . T 4 HOH A 57 300 193 HOH HOH . T 4 HOH A 58 301 197 HOH HOH . T 4 HOH A 59 302 199 HOH HOH . T 4 HOH A 60 303 201 HOH HOH . T 4 HOH A 61 304 202 HOH HOH . T 4 HOH A 62 305 207 HOH HOH . T 4 HOH A 63 306 213 HOH HOH . T 4 HOH A 64 307 215 HOH HOH . T 4 HOH A 65 308 216 HOH HOH . T 4 HOH A 66 309 217 HOH HOH . T 4 HOH A 67 310 219 HOH HOH . T 4 HOH A 68 311 226 HOH HOH . T 4 HOH A 69 312 227 HOH HOH . T 4 HOH A 70 313 230 HOH HOH . T 4 HOH A 71 314 232 HOH HOH . T 4 HOH A 72 315 235 HOH HOH . T 4 HOH A 73 316 243 HOH HOH . U 4 HOH B 1 244 2 HOH HOH . U 4 HOH B 2 245 8 HOH HOH . U 4 HOH B 3 246 9 HOH HOH . U 4 HOH B 4 247 17 HOH HOH . U 4 HOH B 5 248 18 HOH HOH . U 4 HOH B 6 249 20 HOH HOH . U 4 HOH B 7 250 21 HOH HOH . U 4 HOH B 8 251 23 HOH HOH . U 4 HOH B 9 252 252 HOH HOH . U 4 HOH B 10 253 253 HOH HOH . U 4 HOH B 11 254 25 HOH HOH . U 4 HOH B 12 255 28 HOH HOH . U 4 HOH B 13 256 30 HOH HOH . U 4 HOH B 14 257 35 HOH HOH . U 4 HOH B 15 258 37 HOH HOH . U 4 HOH B 16 259 40 HOH HOH . U 4 HOH B 17 260 41 HOH HOH . U 4 HOH B 18 261 42 HOH HOH . U 4 HOH B 19 262 43 HOH HOH . U 4 HOH B 20 263 46 HOH HOH . U 4 HOH B 21 264 54 HOH HOH . U 4 HOH B 22 265 55 HOH HOH . U 4 HOH B 23 266 59 HOH HOH . U 4 HOH B 24 267 63 HOH HOH . U 4 HOH B 25 268 64 HOH HOH . U 4 HOH B 26 269 68 HOH HOH . U 4 HOH B 27 270 79 HOH HOH . U 4 HOH B 28 271 85 HOH HOH . U 4 HOH B 29 272 87 HOH HOH . U 4 HOH B 30 273 89 HOH HOH . U 4 HOH B 31 274 91 HOH HOH . U 4 HOH B 32 275 97 HOH HOH . U 4 HOH B 33 276 100 HOH HOH . U 4 HOH B 34 277 105 HOH HOH . U 4 HOH B 35 278 108 HOH HOH . U 4 HOH B 36 279 109 HOH HOH . U 4 HOH B 37 280 110 HOH HOH . U 4 HOH B 38 281 112 HOH HOH . U 4 HOH B 39 282 113 HOH HOH . U 4 HOH B 40 283 119 HOH HOH . U 4 HOH B 41 284 120 HOH HOH . U 4 HOH B 42 285 121 HOH HOH . U 4 HOH B 43 286 123 HOH HOH . U 4 HOH B 44 287 125 HOH HOH . U 4 HOH B 45 288 126 HOH HOH . U 4 HOH B 46 289 127 HOH HOH . U 4 HOH B 47 290 129 HOH HOH . U 4 HOH B 48 291 130 HOH HOH . U 4 HOH B 49 292 132 HOH HOH . U 4 HOH B 50 293 134 HOH HOH . U 4 HOH B 51 294 139 HOH HOH . U 4 HOH B 52 295 140 HOH HOH . U 4 HOH B 53 296 143 HOH HOH . U 4 HOH B 54 297 151 HOH HOH . U 4 HOH B 55 298 154 HOH HOH . U 4 HOH B 56 299 155 HOH HOH . U 4 HOH B 57 300 176 HOH HOH . U 4 HOH B 58 301 177 HOH HOH . U 4 HOH B 59 302 181 HOH HOH . U 4 HOH B 60 303 182 HOH HOH . U 4 HOH B 61 304 183 HOH HOH . U 4 HOH B 62 305 186 HOH HOH . U 4 HOH B 63 306 187 HOH HOH . U 4 HOH B 64 307 188 HOH HOH . U 4 HOH B 65 308 191 HOH HOH . U 4 HOH B 66 309 196 HOH HOH . U 4 HOH B 67 310 198 HOH HOH . U 4 HOH B 68 311 204 HOH HOH . U 4 HOH B 69 312 211 HOH HOH . U 4 HOH B 70 313 212 HOH HOH . U 4 HOH B 71 314 218 HOH HOH . U 4 HOH B 72 315 220 HOH HOH . U 4 HOH B 73 316 221 HOH HOH . U 4 HOH B 74 317 223 HOH HOH . U 4 HOH B 75 318 224 HOH HOH . U 4 HOH B 76 319 225 HOH HOH . U 4 HOH B 77 320 228 HOH HOH . U 4 HOH B 78 321 234 HOH HOH . U 4 HOH B 79 322 236 HOH HOH . U 4 HOH B 80 323 238 HOH HOH . U 4 HOH B 81 324 241 HOH HOH . V 4 HOH C 1 243 3 HOH HOH . V 4 HOH C 2 244 4 HOH HOH . V 4 HOH C 3 245 245 HOH HOH . V 4 HOH C 4 246 246 HOH HOH . V 4 HOH C 5 247 7 HOH HOH . V 4 HOH C 6 248 15 HOH HOH . V 4 HOH C 7 249 22 HOH HOH . V 4 HOH C 8 250 24 HOH HOH . V 4 HOH C 9 251 26 HOH HOH . V 4 HOH C 10 252 32 HOH HOH . V 4 HOH C 11 253 34 HOH HOH . V 4 HOH C 12 254 38 HOH HOH . V 4 HOH C 13 255 39 HOH HOH . V 4 HOH C 14 256 45 HOH HOH . V 4 HOH C 15 257 47 HOH HOH . V 4 HOH C 16 258 48 HOH HOH . V 4 HOH C 17 259 49 HOH HOH . V 4 HOH C 18 260 60 HOH HOH . V 4 HOH C 19 261 62 HOH HOH . V 4 HOH C 20 262 70 HOH HOH . V 4 HOH C 21 263 72 HOH HOH . V 4 HOH C 22 264 82 HOH HOH . V 4 HOH C 23 265 93 HOH HOH . V 4 HOH C 24 266 96 HOH HOH . V 4 HOH C 25 267 103 HOH HOH . V 4 HOH C 26 268 104 HOH HOH . V 4 HOH C 27 269 107 HOH HOH . V 4 HOH C 28 270 111 HOH HOH . V 4 HOH C 29 271 114 HOH HOH . V 4 HOH C 30 272 115 HOH HOH . V 4 HOH C 31 273 117 HOH HOH . V 4 HOH C 32 274 124 HOH HOH . V 4 HOH C 33 275 133 HOH HOH . V 4 HOH C 34 276 136 HOH HOH . V 4 HOH C 35 277 146 HOH HOH . V 4 HOH C 36 278 148 HOH HOH . V 4 HOH C 37 279 152 HOH HOH . V 4 HOH C 38 280 153 HOH HOH . V 4 HOH C 39 281 159 HOH HOH . V 4 HOH C 40 282 161 HOH HOH . V 4 HOH C 41 283 163 HOH HOH . V 4 HOH C 42 284 170 HOH HOH . V 4 HOH C 43 285 173 HOH HOH . V 4 HOH C 44 286 178 HOH HOH . V 4 HOH C 45 287 184 HOH HOH . V 4 HOH C 46 288 185 HOH HOH . V 4 HOH C 47 289 189 HOH HOH . V 4 HOH C 48 290 190 HOH HOH . V 4 HOH C 49 291 192 HOH HOH . V 4 HOH C 50 292 200 HOH HOH . V 4 HOH C 51 293 205 HOH HOH . V 4 HOH C 52 294 206 HOH HOH . V 4 HOH C 53 295 208 HOH HOH . V 4 HOH C 54 296 209 HOH HOH . V 4 HOH C 55 297 210 HOH HOH . V 4 HOH C 56 298 214 HOH HOH . V 4 HOH C 57 299 222 HOH HOH . V 4 HOH C 58 300 229 HOH HOH . V 4 HOH C 59 301 239 HOH HOH . V 4 HOH C 60 302 240 HOH HOH . W 4 HOH D 1 244 244 HOH HOH . W 4 HOH D 2 245 1 HOH HOH . W 4 HOH D 3 246 52 HOH HOH . W 4 HOH D 4 247 66 HOH HOH . W 4 HOH D 5 248 73 HOH HOH . W 4 HOH D 6 249 74 HOH HOH . W 4 HOH D 7 250 78 HOH HOH . W 4 HOH D 8 251 251 HOH HOH . W 4 HOH D 9 252 80 HOH HOH . W 4 HOH D 10 253 83 HOH HOH . W 4 HOH D 11 254 86 HOH HOH . W 4 HOH D 12 255 88 HOH HOH . W 4 HOH D 13 256 90 HOH HOH . W 4 HOH D 14 257 98 HOH HOH . W 4 HOH D 15 258 102 HOH HOH . W 4 HOH D 16 259 128 HOH HOH . W 4 HOH D 17 260 138 HOH HOH . W 4 HOH D 18 261 142 HOH HOH . W 4 HOH D 19 262 149 HOH HOH . W 4 HOH D 20 263 150 HOH HOH . W 4 HOH D 21 264 157 HOH HOH . W 4 HOH D 22 265 160 HOH HOH . W 4 HOH D 23 266 162 HOH HOH . W 4 HOH D 24 267 164 HOH HOH . W 4 HOH D 25 268 165 HOH HOH . W 4 HOH D 26 269 169 HOH HOH . W 4 HOH D 27 270 171 HOH HOH . W 4 HOH D 28 271 172 HOH HOH . W 4 HOH D 29 272 180 HOH HOH . W 4 HOH D 30 273 194 HOH HOH . W 4 HOH D 31 274 195 HOH HOH . W 4 HOH D 32 275 203 HOH HOH . W 4 HOH D 33 276 231 HOH HOH . W 4 HOH D 34 277 237 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . Q 3 68.489 -38.344 -54.731 0.92 92.1 ? S SO4 241 D 1 HETATM 2 O O1 SO4 . . . Q 3 69.526 -38.862 -55.61 0.92 90.21 ? O1 SO4 241 D 1 HETATM 3 O O2 SO4 . . . Q 3 67.1 -38.675 -55.065 0.92 91.43 ? O2 SO4 241 D 1 HETATM 4 O O3 SO4 . . . Q 3 68.769 -38.882 -53.429 0.92 95.24 ? O3 SO4 241 D 1 HETATM 5 O O4 SO4 . . . Q 3 68.655 -36.905 -54.758 0.92 94.57 ? O4 SO4 241 D 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #