data_3RLH # _model_server_result.job_id ell_R4JphP7hffh5s7xCuQ _model_server_result.datetime_utc '2025-03-26 21:56:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rlh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 3RLH # _exptl.entry_id 3RLH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.83 _cell.angle_gamma 90 _cell.entry_id 3RLH _cell.length_a 49.81 _cell.length_b 49.3 _cell.length_c 56.3 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RLH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 51 1_555 A SG CYS 107 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 103 A CYS 53 1_555 A SG CYS 246 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc1 A OE2 GLU 81 A GLU 32 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? metalc ? metalc2 A OD1 ASP 83 A ASP 34 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc3 A OD2 ASP 141 A ASP 91 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc4 B O08 A1BTZ . A A1BTZ 301 1_555 C MG MG . A MG 302 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc5 B O08 A1BTZ . A A1BTZ 301 1_555 C MG MG . A MG 302 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc6 B O10 A1BTZ . A A1BTZ 301 1_555 C MG MG . A MG 302 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc7 B O10 A1BTZ . A A1BTZ 301 1_555 C MG MG . A MG 302 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc8 C MG MG . A MG 302 1_555 I O HOH . A HOH 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 104 n n C1 C2 EDO sing 105 n n C1 H11 EDO sing 106 n n C1 H12 EDO sing 107 n n O1 HO1 EDO sing 108 n n C2 O2 EDO sing 109 n n C2 H21 EDO sing 110 n n C2 H22 EDO sing 111 n n O2 HO2 EDO sing 112 n n # _atom_sites.entry_id 3RLH _atom_sites.fract_transf_matrix[1][1] 0.020076 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005692 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020284 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1BTZ A 1 301 473 A1BTZ LIG . C 3 MG A 1 302 286 MG MG . D 4 PGE A 1 303 287 PGE PGE . E 5 PEG A 1 304 288 PEG PEG . F 5 PEG A 1 305 290 PEG PEG . G 6 EDO A 1 306 292 EDO EDO . H 6 EDO A 1 307 293 EDO EDO . I 7 HOH A 1 401 440 HOH HOH . I 7 HOH A 2 402 386 HOH HOH . I 7 HOH A 3 403 1 HOH HOH . I 7 HOH A 4 404 376 HOH HOH . I 7 HOH A 5 405 470 HOH HOH . I 7 HOH A 6 406 456 HOH HOH . I 7 HOH A 7 407 394 HOH HOH . I 7 HOH A 8 408 303 HOH HOH . I 7 HOH A 9 409 375 HOH HOH . I 7 HOH A 10 410 373 HOH HOH . I 7 HOH A 11 411 453 HOH HOH . I 7 HOH A 12 412 323 HOH HOH . I 7 HOH A 13 413 325 HOH HOH . I 7 HOH A 14 414 332 HOH HOH . I 7 HOH A 15 415 411 HOH HOH . I 7 HOH A 16 416 359 HOH HOH . I 7 HOH A 17 417 369 HOH HOH . I 7 HOH A 18 418 352 HOH HOH . I 7 HOH A 19 419 343 HOH HOH . I 7 HOH A 20 420 388 HOH HOH . I 7 HOH A 21 421 424 HOH HOH . I 7 HOH A 22 422 457 HOH HOH . I 7 HOH A 23 423 302 HOH HOH . I 7 HOH A 24 424 390 HOH HOH . I 7 HOH A 25 425 315 HOH HOH . I 7 HOH A 26 426 367 HOH HOH . I 7 HOH A 27 427 380 HOH HOH . I 7 HOH A 28 428 8 HOH HOH . I 7 HOH A 29 429 312 HOH HOH . I 7 HOH A 30 430 401 HOH HOH . I 7 HOH A 31 431 383 HOH HOH . I 7 HOH A 32 432 310 HOH HOH . I 7 HOH A 33 433 309 HOH HOH . I 7 HOH A 34 434 351 HOH HOH . I 7 HOH A 35 435 393 HOH HOH . I 7 HOH A 36 436 307 HOH HOH . I 7 HOH A 37 437 363 HOH HOH . I 7 HOH A 38 438 409 HOH HOH . I 7 HOH A 39 439 415 HOH HOH . I 7 HOH A 40 440 461 HOH HOH . I 7 HOH A 41 441 459 HOH HOH . I 7 HOH A 42 442 360 HOH HOH . I 7 HOH A 43 443 435 HOH HOH . I 7 HOH A 44 444 355 HOH HOH . I 7 HOH A 45 445 339 HOH HOH . I 7 HOH A 46 446 316 HOH HOH . I 7 HOH A 47 447 446 HOH HOH . I 7 HOH A 48 448 12 HOH HOH . I 7 HOH A 49 449 317 HOH HOH . I 7 HOH A 50 450 340 HOH HOH . I 7 HOH A 51 451 466 HOH HOH . I 7 HOH A 52 452 330 HOH HOH . I 7 HOH A 53 453 385 HOH HOH . I 7 HOH A 54 454 452 HOH HOH . I 7 HOH A 55 455 338 HOH HOH . I 7 HOH A 56 456 294 HOH HOH . I 7 HOH A 57 457 378 HOH HOH . I 7 HOH A 58 458 412 HOH HOH . I 7 HOH A 59 459 382 HOH HOH . I 7 HOH A 60 460 328 HOH HOH . I 7 HOH A 61 461 447 HOH HOH . I 7 HOH A 62 462 345 HOH HOH . I 7 HOH A 63 463 297 HOH HOH . I 7 HOH A 64 464 439 HOH HOH . I 7 HOH A 65 465 379 HOH HOH . I 7 HOH A 66 466 455 HOH HOH . I 7 HOH A 67 467 356 HOH HOH . I 7 HOH A 68 468 414 HOH HOH . I 7 HOH A 69 469 358 HOH HOH . I 7 HOH A 70 470 468 HOH HOH . I 7 HOH A 71 471 4 HOH HOH . I 7 HOH A 72 472 324 HOH HOH . I 7 HOH A 73 473 398 HOH HOH . I 7 HOH A 74 474 366 HOH HOH . I 7 HOH A 75 475 392 HOH HOH . I 7 HOH A 76 476 344 HOH HOH . I 7 HOH A 77 477 304 HOH HOH . I 7 HOH A 78 478 311 HOH HOH . I 7 HOH A 79 479 10 HOH HOH . I 7 HOH A 80 480 172 HOH HOH . I 7 HOH A 81 481 308 HOH HOH . I 7 HOH A 82 482 408 HOH HOH . I 7 HOH A 83 483 306 HOH HOH . I 7 HOH A 84 484 300 HOH HOH . I 7 HOH A 85 485 403 HOH HOH . I 7 HOH A 86 486 11 HOH HOH . I 7 HOH A 87 487 372 HOH HOH . I 7 HOH A 88 488 404 HOH HOH . I 7 HOH A 89 489 374 HOH HOH . I 7 HOH A 90 490 449 HOH HOH . I 7 HOH A 91 491 347 HOH HOH . I 7 HOH A 92 492 432 HOH HOH . I 7 HOH A 93 493 329 HOH HOH . I 7 HOH A 94 494 314 HOH HOH . I 7 HOH A 95 495 333 HOH HOH . I 7 HOH A 96 496 354 HOH HOH . I 7 HOH A 97 497 322 HOH HOH . I 7 HOH A 98 498 335 HOH HOH . I 7 HOH A 99 499 362 HOH HOH . I 7 HOH A 100 500 399 HOH HOH . I 7 HOH A 101 501 368 HOH HOH . I 7 HOH A 102 502 465 HOH HOH . I 7 HOH A 103 503 361 HOH HOH . I 7 HOH A 104 504 469 HOH HOH . I 7 HOH A 105 505 417 HOH HOH . I 7 HOH A 106 506 350 HOH HOH . I 7 HOH A 107 507 9 HOH HOH . I 7 HOH A 108 508 405 HOH HOH . I 7 HOH A 109 509 353 HOH HOH . I 7 HOH A 110 510 395 HOH HOH . I 7 HOH A 111 511 346 HOH HOH . I 7 HOH A 112 512 400 HOH HOH . I 7 HOH A 113 513 428 HOH HOH . I 7 HOH A 114 514 472 HOH HOH . I 7 HOH A 115 515 169 HOH HOH . I 7 HOH A 116 516 467 HOH HOH . I 7 HOH A 117 517 318 HOH HOH . I 7 HOH A 118 518 402 HOH HOH . I 7 HOH A 119 519 391 HOH HOH . I 7 HOH A 120 520 370 HOH HOH . I 7 HOH A 121 521 336 HOH HOH . I 7 HOH A 122 522 337 HOH HOH . I 7 HOH A 123 523 357 HOH HOH . I 7 HOH A 124 524 305 HOH HOH . I 7 HOH A 125 525 348 HOH HOH . I 7 HOH A 126 526 471 HOH HOH . I 7 HOH A 127 527 397 HOH HOH . I 7 HOH A 128 528 341 HOH HOH . I 7 HOH A 129 529 458 HOH HOH . I 7 HOH A 130 530 442 HOH HOH . I 7 HOH A 131 531 326 HOH HOH . I 7 HOH A 132 532 301 HOH HOH . I 7 HOH A 133 533 320 HOH HOH . I 7 HOH A 134 534 296 HOH HOH . I 7 HOH A 135 535 384 HOH HOH . I 7 HOH A 136 536 454 HOH HOH . I 7 HOH A 137 537 371 HOH HOH . I 7 HOH A 138 538 389 HOH HOH . I 7 HOH A 139 539 413 HOH HOH . I 7 HOH A 140 540 416 HOH HOH . I 7 HOH A 141 541 319 HOH HOH . I 7 HOH A 142 542 171 HOH HOH . I 7 HOH A 143 543 334 HOH HOH . I 7 HOH A 144 544 365 HOH HOH . I 7 HOH A 145 545 443 HOH HOH . I 7 HOH A 146 546 464 HOH HOH . I 7 HOH A 147 547 331 HOH HOH . I 7 HOH A 148 548 321 HOH HOH . I 7 HOH A 149 549 364 HOH HOH . I 7 HOH A 150 550 6 HOH HOH . I 7 HOH A 151 551 7 HOH HOH . I 7 HOH A 152 552 429 HOH HOH . I 7 HOH A 153 553 342 HOH HOH . I 7 HOH A 154 554 377 HOH HOH . I 7 HOH A 155 555 421 HOH HOH . I 7 HOH A 156 556 407 HOH HOH . I 7 HOH A 157 557 313 HOH HOH . I 7 HOH A 158 558 433 HOH HOH . I 7 HOH A 159 559 327 HOH HOH . I 7 HOH A 160 560 387 HOH HOH . I 7 HOH A 161 561 299 HOH HOH . I 7 HOH A 162 562 410 HOH HOH . I 7 HOH A 163 563 396 HOH HOH . I 7 HOH A 164 564 298 HOH HOH . I 7 HOH A 165 565 295 HOH HOH . I 7 HOH A 166 566 418 HOH HOH . I 7 HOH A 167 567 448 HOH HOH . I 7 HOH A 168 568 5 HOH HOH . I 7 HOH A 169 569 381 HOH HOH . I 7 HOH A 170 570 420 HOH HOH . I 7 HOH A 171 571 3 HOH HOH . I 7 HOH A 172 572 427 HOH HOH . I 7 HOH A 173 573 460 HOH HOH . I 7 HOH A 174 574 423 HOH HOH . I 7 HOH A 175 575 170 HOH HOH . I 7 HOH A 176 576 444 HOH HOH . I 7 HOH A 177 577 168 HOH HOH . I 7 HOH A 178 578 419 HOH HOH . I 7 HOH A 179 579 422 HOH HOH . I 7 HOH A 180 580 2 HOH HOH . I 7 HOH A 181 581 406 HOH HOH . I 7 HOH A 182 582 349 HOH HOH . I 7 HOH A 183 583 425 HOH HOH . I 7 HOH A 184 584 445 HOH HOH . I 7 HOH A 185 585 441 HOH HOH . I 7 HOH A 186 586 436 HOH HOH . I 7 HOH A 187 587 431 HOH HOH . I 7 HOH A 188 588 434 HOH HOH . I 7 HOH A 189 589 430 HOH HOH . I 7 HOH A 190 590 426 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 6 7.099 15.595 6.09 1 33.19 ? C1 EDO 306 A 1 HETATM 2 O O1 EDO . . . G 6 7.289 15.842 7.51 1 39.91 ? O1 EDO 306 A 1 HETATM 3 C C2 EDO . . . G 6 5.707 15.028 5.846 1 38.6 ? C2 EDO 306 A 1 HETATM 4 O O2 EDO . . . G 6 5.724 13.65 6.266 1 34.85 ? O2 EDO 306 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #