data_3RLL # _model_server_result.job_id N2AiUicRw7tqBFCmdjEXuQ _model_server_result.datetime_utc '2024-11-25 16:17:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rll # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3RLL # _exptl.entry_id 3RLL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 439.387 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-3-[(4-cyanonaphthalen-1-yl)oxy]-N-[4-cyano-3-(trifluoromethyl)phenyl]-2-hydroxy-2-methylpropanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RLL _cell.length_a 54.45 _cell.length_b 66.42 _cell.length_c 69.95 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RLL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H16 F3 N3 O3' _chem_comp.formula_weight 439.387 _chem_comp.id RLL _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-3-[(4-cyanonaphthalen-1-yl)oxy]-N-[4-cyano-3-(trifluoromethyl)phenyl]-2-hydroxy-2-methylpropanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBE RLL sing 277 n n NAB CAI RLL trip 278 n n NAC CAJ RLL trip 279 n n OAD CAW RLL doub 280 n n OAE CBE RLL sing 281 n n FAF CBF RLL sing 282 n n FAG CBF RLL sing 283 n n FAH CBF RLL sing 284 n n CAI CAY RLL sing 285 n n CAJ CAZ RLL sing 286 n n CAK CAL RLL doub 287 n y CAK CAQ RLL sing 288 n y CAL CAR RLL sing 289 n y CAM CAN RLL doub 290 n y CAM CAX RLL sing 291 n y CAN CAY RLL sing 292 n y CAO CAP RLL sing 293 n y CAO CAZ RLL doub 294 n y CAP CBA RLL doub 295 n y CAQ CBC RLL doub 296 n y CAR CBD RLL doub 297 n y CAS CAX RLL doub 298 n y CAS CBB RLL sing 299 n y CAT OAV RLL sing 300 n n CAT CBE RLL sing 301 n n NAU CAW RLL sing 302 n n NAU CAX RLL sing 303 n n OAV CBA RLL sing 304 n n CAW CBE RLL sing 305 n n CAY CBB RLL doub 306 n y CAZ CBC RLL sing 307 n y CBA CBD RLL sing 308 n y CBB CBF RLL sing 309 n n CBC CBD RLL sing 310 n y CAA HAA RLL sing 311 n n CAA HAAA RLL sing 312 n n CAA HAAB RLL sing 313 n n OAE HOAE RLL sing 314 n n CAK HAK RLL sing 315 n n CAL HAL RLL sing 316 n n CAM HAM RLL sing 317 n n CAN HAN RLL sing 318 n n CAO HAO RLL sing 319 n n CAP HAP RLL sing 320 n n CAQ HAQ RLL sing 321 n n CAR HAR RLL sing 322 n n CAS HAS RLL sing 323 n n CAT HAT RLL sing 324 n n CAT HATA RLL sing 325 n n NAU HNAU RLL sing 326 n n # _atom_sites.entry_id 3RLL _atom_sites.fract_transf_matrix[1][1] 0.018365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015056 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014296 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RLL A 1 1 1 RLL DRG . C 3 HOH A 1 101 101 HOH WAT . C 3 HOH A 2 102 102 HOH WAT . C 3 HOH A 3 103 103 HOH WAT . C 3 HOH A 4 104 104 HOH WAT . C 3 HOH A 5 105 105 HOH WAT . C 3 HOH A 6 106 106 HOH WAT . C 3 HOH A 7 107 107 HOH WAT . C 3 HOH A 8 108 108 HOH WAT . C 3 HOH A 9 109 109 HOH WAT . C 3 HOH A 10 110 110 HOH WAT . C 3 HOH A 11 111 111 HOH WAT . C 3 HOH A 12 112 112 HOH WAT . C 3 HOH A 13 113 113 HOH WAT . C 3 HOH A 14 114 114 HOH WAT . C 3 HOH A 15 115 115 HOH WAT . C 3 HOH A 16 116 116 HOH WAT . C 3 HOH A 17 117 117 HOH WAT . C 3 HOH A 18 118 118 HOH WAT . C 3 HOH A 19 119 119 HOH WAT . C 3 HOH A 20 120 120 HOH WAT . C 3 HOH A 21 121 121 HOH WAT . C 3 HOH A 22 122 122 HOH WAT . C 3 HOH A 23 123 123 HOH WAT . C 3 HOH A 24 124 124 HOH WAT . C 3 HOH A 25 125 125 HOH WAT . C 3 HOH A 26 126 126 HOH WAT . C 3 HOH A 27 127 127 HOH WAT . C 3 HOH A 28 128 128 HOH WAT . C 3 HOH A 29 129 129 HOH WAT . C 3 HOH A 30 130 130 HOH WAT . C 3 HOH A 31 131 131 HOH WAT . C 3 HOH A 32 132 132 HOH WAT . C 3 HOH A 33 133 133 HOH WAT . C 3 HOH A 34 134 134 HOH WAT . C 3 HOH A 35 135 135 HOH WAT . C 3 HOH A 36 136 136 HOH WAT . C 3 HOH A 37 137 137 HOH WAT . C 3 HOH A 38 138 138 HOH WAT . C 3 HOH A 39 139 139 HOH WAT . C 3 HOH A 40 140 140 HOH WAT . C 3 HOH A 41 141 141 HOH WAT . C 3 HOH A 42 142 142 HOH WAT . C 3 HOH A 43 143 143 HOH WAT . C 3 HOH A 44 155 155 HOH WAT . C 3 HOH A 45 156 156 HOH WAT . C 3 HOH A 46 157 157 HOH WAT . C 3 HOH A 47 158 158 HOH WAT . C 3 HOH A 48 159 159 HOH WAT . C 3 HOH A 49 160 160 HOH WAT . C 3 HOH A 50 161 161 HOH WAT . C 3 HOH A 51 162 162 HOH WAT . C 3 HOH A 52 163 163 HOH WAT . C 3 HOH A 53 164 164 HOH WAT . C 3 HOH A 54 165 165 HOH WAT . C 3 HOH A 55 166 166 HOH WAT . C 3 HOH A 56 167 167 HOH WAT . C 3 HOH A 57 168 168 HOH WAT . C 3 HOH A 58 169 169 HOH WAT . C 3 HOH A 59 170 170 HOH WAT . C 3 HOH A 60 171 171 HOH WAT . C 3 HOH A 61 172 172 HOH WAT . C 3 HOH A 62 173 173 HOH WAT . C 3 HOH A 63 174 174 HOH WAT . C 3 HOH A 64 175 175 HOH WAT . C 3 HOH A 65 176 176 HOH WAT . C 3 HOH A 66 177 177 HOH WAT . C 3 HOH A 67 178 178 HOH WAT . C 3 HOH A 68 179 179 HOH WAT . C 3 HOH A 69 180 180 HOH WAT . C 3 HOH A 70 181 181 HOH WAT . C 3 HOH A 71 182 182 HOH WAT . C 3 HOH A 72 183 183 HOH WAT . C 3 HOH A 73 184 184 HOH WAT . C 3 HOH A 74 185 185 HOH WAT . C 3 HOH A 75 186 186 HOH WAT . C 3 HOH A 76 187 187 HOH WAT . C 3 HOH A 77 188 188 HOH WAT . C 3 HOH A 78 189 189 HOH WAT . C 3 HOH A 79 190 190 HOH WAT . C 3 HOH A 80 191 191 HOH WAT . C 3 HOH A 81 192 192 HOH WAT . C 3 HOH A 82 193 193 HOH WAT . C 3 HOH A 83 194 194 HOH WAT . C 3 HOH A 84 195 195 HOH WAT . C 3 HOH A 85 196 196 HOH WAT . C 3 HOH A 86 197 197 HOH WAT . C 3 HOH A 87 198 198 HOH WAT . C 3 HOH A 88 199 199 HOH WAT . C 3 HOH A 89 200 200 HOH WAT . C 3 HOH A 90 201 201 HOH WAT . C 3 HOH A 91 202 202 HOH WAT . C 3 HOH A 92 203 203 HOH WAT . C 3 HOH A 93 204 204 HOH WAT . C 3 HOH A 94 205 205 HOH WAT . C 3 HOH A 95 206 206 HOH WAT . C 3 HOH A 96 207 207 HOH WAT . C 3 HOH A 97 208 208 HOH WAT . C 3 HOH A 98 209 209 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA RLL . . . B 2 29.366 -1.077 2.701 1 22.49 ? CAA RLL 1 A 1 HETATM 2 N NAB RLL . . . B 2 23.983 7.25 4.16 1 15.84 ? NAB RLL 1 A 1 HETATM 3 N NAC RLL . . . B 2 28.5 0.235 12.199 1 20.99 ? NAC RLL 1 A 1 HETATM 4 O OAD RLL . . . B 2 27.167 0.393 3.833 1 23.38 ? OAD RLL 1 A 1 HETATM 5 O OAE RLL . . . B 2 30.551 1.035 2.985 1 21.24 ? OAE RLL 1 A 1 HETATM 6 F FAF RLL . . . B 2 23.516 2.289 4.209 1 24.48 ? FAF RLL 1 A 1 HETATM 7 F FAG RLL . . . B 2 23.519 3.867 5.679 1 23.19 ? FAG RLL 1 A 1 HETATM 8 F FAH RLL . . . B 2 22.857 4.256 3.658 1 23.63 ? FAH RLL 1 A 1 HETATM 9 C CAI RLL . . . B 2 24.691 6.368 4.038 1 19.46 ? CAI RLL 1 A 1 HETATM 10 C CAJ RLL . . . B 2 28.746 0.386 11.098 1 18.37 ? CAJ RLL 1 A 1 HETATM 11 C CAK RLL . . . B 2 27.305 3.712 8.934 1 17.79 ? CAK RLL 1 A 1 HETATM 12 C CAL RLL . . . B 2 27.615 3.857 7.586 1 17.44 ? CAL RLL 1 A 1 HETATM 13 C CAM RLL . . . B 2 27.842 4.533 3.427 1 20.87 ? CAM RLL 1 A 1 HETATM 14 C CAN RLL . . . B 2 26.915 5.556 3.574 1 20.66 ? CAN RLL 1 A 1 HETATM 15 C CAO RLL . . . B 2 29.842 -0.387 9.066 1 18.54 ? CAO RLL 1 A 1 HETATM 16 C CAP RLL . . . B 2 30.146 -0.24 7.717 1 19.11 ? CAP RLL 1 A 1 HETATM 17 C CAQ RLL . . . B 2 27.788 2.617 9.643 1 17.68 ? CAQ RLL 1 A 1 HETATM 18 C CAR RLL . . . B 2 28.407 2.907 6.952 1 19.59 ? CAR RLL 1 A 1 HETATM 19 C CAS RLL . . . B 2 26.122 2.922 3.883 1 21.21 ? CAS RLL 1 A 1 HETATM 20 C CAT RLL . . . B 2 29.959 -0.187 4.964 1 19.4 ? CAT RLL 1 A 1 HETATM 21 N NAU RLL . . . B 2 28.404 2.282 3.522 1 21.09 ? NAU RLL 1 A 1 HETATM 22 O OAV RLL . . . B 2 29.975 1.043 5.703 1 19.15 ? OAV RLL 1 A 1 HETATM 23 C CAW RLL . . . B 2 28.238 0.967 3.643 1 21.55 ? CAW RLL 1 A 1 HETATM 24 C CAX RLL . . . B 2 27.45 3.209 3.584 1 21.55 ? CAX RLL 1 A 1 HETATM 25 C CAY RLL . . . B 2 25.59 5.265 3.878 1 19.47 ? CAY RLL 1 A 1 HETATM 26 C CAZ RLL . . . B 2 29.059 0.564 9.713 1 18.91 ? CAZ RLL 1 A 1 HETATM 27 C CBA RLL . . . B 2 29.669 0.861 7.016 1 19.01 ? CBA RLL 1 A 1 HETATM 28 C CBB RLL . . . B 2 25.184 3.941 4.034 1 21.17 ? CBB RLL 1 A 1 HETATM 29 C CBC RLL . . . B 2 28.581 1.666 9.011 1 18.98 ? CBC RLL 1 A 1 HETATM 30 C CBD RLL . . . B 2 28.889 1.813 7.662 1 19.06 ? CBD RLL 1 A 1 HETATM 31 C CBE RLL . . . B 2 29.549 0.185 3.549 1 21.41 ? CBE RLL 1 A 1 HETATM 32 C CBF RLL . . . B 2 23.736 3.586 4.398 1 22.26 ? CBF RLL 1 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 32 #