data_3RM1 # _model_server_result.job_id 7a_Hae_sWDfOZ84Eg0SsOQ _model_server_result.datetime_utc '2025-04-06 22:19:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rm1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 3RM1 # _exptl.entry_id 3RM1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RM1 _cell.length_a 35.007 _cell.length_b 89.251 _cell.length_c 59.668 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RM1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 19 A SER 18 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc2 A O GLU 22 A GLU 21 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc3 A O ASP 24 A ASP 23 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc4 A O LYS 27 A LYS 26 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc5 A OE1 GLU 32 A GLU 31 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc6 A OE2 GLU 32 A GLU 31 1_555 C CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc7 A OD1 ASP 62 A ASP 61 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc8 A OD1 ASN 64 A ASN 63 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc9 A OD1 ASP 66 A ASP 65 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc10 A O GLU 68 A GLU 67 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc11 A OE1 GLU 73 A GLU 72 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc12 A OE2 GLU 73 A GLU 72 1_555 D CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc13 C CA CA . A CA 101 1_555 E O HOH . A HOH 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc14 D CA CA . A CA 102 1_555 E O HOH . A HOH 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3RM1 _atom_sites.fract_transf_matrix[1][1] 0.028566 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011204 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016759 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 101 1 CA CA . D 3 CA A 1 102 2 CA CA . E 4 HOH A 1 201 1 HOH HOH . E 4 HOH A 2 202 2 HOH HOH . E 4 HOH A 3 203 3 HOH HOH . E 4 HOH A 4 204 94 HOH HOH . E 4 HOH A 5 205 95 HOH HOH . E 4 HOH A 6 206 96 HOH HOH . E 4 HOH A 7 207 97 HOH HOH . E 4 HOH A 8 208 98 HOH HOH . E 4 HOH A 9 209 4 HOH HOH . E 4 HOH A 10 210 100 HOH HOH . E 4 HOH A 11 211 101 HOH HOH . E 4 HOH A 12 212 102 HOH HOH . E 4 HOH A 13 213 103 HOH HOH . E 4 HOH A 14 214 104 HOH HOH . E 4 HOH A 15 215 105 HOH HOH . E 4 HOH A 16 216 106 HOH HOH . E 4 HOH A 17 217 107 HOH HOH . E 4 HOH A 18 218 108 HOH HOH . E 4 HOH A 19 219 5 HOH HOH . E 4 HOH A 20 220 6 HOH HOH . E 4 HOH A 21 221 111 HOH HOH . E 4 HOH A 22 222 7 HOH HOH . E 4 HOH A 23 223 113 HOH HOH . E 4 HOH A 24 224 114 HOH HOH . E 4 HOH A 25 225 115 HOH HOH . E 4 HOH A 26 226 116 HOH HOH . E 4 HOH A 27 227 8 HOH HOH . E 4 HOH A 28 228 118 HOH HOH . E 4 HOH A 29 229 119 HOH HOH . E 4 HOH A 30 230 120 HOH HOH . E 4 HOH A 31 231 121 HOH HOH . E 4 HOH A 32 232 9 HOH HOH . E 4 HOH A 33 233 10 HOH HOH . E 4 HOH A 34 234 11 HOH HOH . E 4 HOH A 35 235 12 HOH HOH . E 4 HOH A 36 236 13 HOH HOH . E 4 HOH A 37 237 14 HOH HOH . E 4 HOH A 38 238 15 HOH HOH . E 4 HOH A 39 239 16 HOH HOH . E 4 HOH A 40 240 17 HOH HOH . E 4 HOH A 41 241 18 HOH HOH . E 4 HOH A 42 242 19 HOH HOH . E 4 HOH A 43 243 20 HOH HOH . E 4 HOH A 44 244 21 HOH HOH . E 4 HOH A 45 245 22 HOH HOH . E 4 HOH A 46 246 23 HOH HOH . E 4 HOH A 47 247 24 HOH HOH . E 4 HOH A 48 248 25 HOH HOH . E 4 HOH A 49 249 26 HOH HOH . E 4 HOH A 50 250 27 HOH HOH . E 4 HOH A 51 251 28 HOH HOH . E 4 HOH A 52 252 29 HOH HOH . E 4 HOH A 53 253 30 HOH HOH . E 4 HOH A 54 254 31 HOH HOH . E 4 HOH A 55 255 32 HOH HOH . E 4 HOH A 56 256 33 HOH HOH . E 4 HOH A 57 257 34 HOH HOH . E 4 HOH A 58 258 35 HOH HOH . E 4 HOH A 59 259 36 HOH HOH . E 4 HOH A 60 260 37 HOH HOH . E 4 HOH A 61 261 38 HOH HOH . E 4 HOH A 62 262 39 HOH HOH . E 4 HOH A 63 263 40 HOH HOH . E 4 HOH A 64 264 41 HOH HOH . E 4 HOH A 65 265 42 HOH HOH . E 4 HOH A 66 266 43 HOH HOH . E 4 HOH A 67 267 44 HOH HOH . E 4 HOH A 68 268 45 HOH HOH . E 4 HOH A 69 269 46 HOH HOH . E 4 HOH A 70 270 47 HOH HOH . E 4 HOH A 71 271 48 HOH HOH . E 4 HOH A 72 272 49 HOH HOH . E 4 HOH A 73 273 50 HOH HOH . E 4 HOH A 74 274 51 HOH HOH . E 4 HOH A 75 275 52 HOH HOH . E 4 HOH A 76 276 53 HOH HOH . E 4 HOH A 77 277 54 HOH HOH . E 4 HOH A 78 278 55 HOH HOH . E 4 HOH A 79 279 56 HOH HOH . E 4 HOH A 80 280 57 HOH HOH . E 4 HOH A 81 281 58 HOH HOH . E 4 HOH A 82 282 59 HOH HOH . E 4 HOH A 83 283 60 HOH HOH . E 4 HOH A 84 284 61 HOH HOH . E 4 HOH A 85 285 62 HOH HOH . E 4 HOH A 86 286 63 HOH HOH . E 4 HOH A 87 287 64 HOH HOH . E 4 HOH A 88 288 65 HOH HOH . E 4 HOH A 89 289 66 HOH HOH . E 4 HOH A 90 290 67 HOH HOH . E 4 HOH A 91 291 68 HOH HOH . E 4 HOH A 92 292 69 HOH HOH . E 4 HOH A 93 293 70 HOH HOH . E 4 HOH A 94 294 71 HOH HOH . E 4 HOH A 95 295 72 HOH HOH . E 4 HOH A 96 296 73 HOH HOH . E 4 HOH A 97 297 74 HOH HOH . E 4 HOH A 98 298 75 HOH HOH . E 4 HOH A 99 299 76 HOH HOH . E 4 HOH A 100 300 77 HOH HOH . E 4 HOH A 101 301 78 HOH HOH . E 4 HOH A 102 302 79 HOH HOH . E 4 HOH A 103 303 80 HOH HOH . E 4 HOH A 104 304 81 HOH HOH . E 4 HOH A 105 305 82 HOH HOH . E 4 HOH A 106 306 83 HOH HOH . E 4 HOH A 107 307 84 HOH HOH . E 4 HOH A 108 308 85 HOH HOH . E 4 HOH A 109 309 86 HOH HOH . E 4 HOH A 110 310 87 HOH HOH . E 4 HOH A 111 311 88 HOH HOH . E 4 HOH A 112 312 89 HOH HOH . E 4 HOH A 113 313 90 HOH HOH . E 4 HOH A 114 314 91 HOH HOH . E 4 HOH A 115 315 117 HOH HOH . F 4 HOH B 1 101 92 HOH HOH . F 4 HOH B 2 102 93 HOH HOH . F 4 HOH B 3 103 99 HOH HOH . F 4 HOH B 4 104 109 HOH HOH . F 4 HOH B 5 105 110 HOH HOH . F 4 HOH B 6 106 112 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 7.906 _atom_site.Cartn_y -16.842 _atom_site.Cartn_z 10.609 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 101 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 1 #