data_3RM3
#
_model_server_result.job_id            C2GsNi6WhVitwQn3hz5T8A 
_model_server_result.datetime_utc      '2024-12-03 01:14:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rm3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    3RM3 
#
_exptl.entry_id    3RM3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4R)-2-METHYLPENTANE-2,4-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.7 
_cell.angle_gamma         90 
_cell.entry_id            3RM3 
_cell.length_a            38.15 
_cell.length_b            71.21 
_cell.length_c            43.66 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RM3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MRD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4R)-2-METHYLPENTANE-2,4-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MRD sing 237 n n 
C1 H1C1 MRD sing 238 n n 
C1 H1C2 MRD sing 239 n n 
C1 H1C3 MRD sing 240 n n 
C2 O2 MRD sing 241 n n 
C2 CM MRD sing 242 n n 
C2 C3 MRD sing 243 n n 
O2 H2 MRD sing 244 n n 
CM HMC1 MRD sing 245 n n 
CM HMC2 MRD sing 246 n n 
CM HMC3 MRD sing 247 n n 
C3 C4 MRD sing 248 n n 
C3 H3C1 MRD sing 249 n n 
C3 H3C2 MRD sing 250 n n 
C4 O4 MRD sing 251 n n 
C4 C5 MRD sing 252 n n 
C4 H4 MRD sing 253 n n 
O4 HA MRD sing 254 n n 
C5 H5C1 MRD sing 255 n n 
C5 H5C2 MRD sing 256 n n 
C5 H5C3 MRD sing 257 n n 
#
_atom_sites.entry_id                     3RM3 
_atom_sites.fract_transf_matrix[1][1]    0.026212 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.010431 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014043 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024651 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MRD A 1 301 5276 MRD MPD . 
C 3 HOH A 1 401 1 HOH HOH . 
C 3 HOH A 2 402 2 HOH HOH . 
C 3 HOH A 3 403 3 HOH HOH . 
C 3 HOH A 4 404 4 HOH HOH . 
C 3 HOH A 5 405 5 HOH HOH . 
C 3 HOH A 6 406 6 HOH HOH . 
C 3 HOH A 7 407 7 HOH HOH . 
C 3 HOH A 8 408 8 HOH HOH . 
C 3 HOH A 9 409 10 HOH HOH . 
C 3 HOH A 10 410 11 HOH HOH . 
C 3 HOH A 11 411 12 HOH HOH . 
C 3 HOH A 12 412 13 HOH HOH . 
C 3 HOH A 13 413 14 HOH HOH . 
C 3 HOH A 14 414 15 HOH HOH . 
C 3 HOH A 15 415 16 HOH HOH . 
C 3 HOH A 16 416 17 HOH HOH . 
C 3 HOH A 17 417 18 HOH HOH . 
C 3 HOH A 18 418 19 HOH HOH . 
C 3 HOH A 19 419 20 HOH HOH . 
C 3 HOH A 20 420 21 HOH HOH . 
C 3 HOH A 21 421 22 HOH HOH . 
C 3 HOH A 22 422 23 HOH HOH . 
C 3 HOH A 23 423 24 HOH HOH . 
C 3 HOH A 24 424 25 HOH HOH . 
C 3 HOH A 25 425 26 HOH HOH . 
C 3 HOH A 26 426 27 HOH HOH . 
C 3 HOH A 27 427 28 HOH HOH . 
C 3 HOH A 28 428 30 HOH HOH . 
C 3 HOH A 29 429 31 HOH HOH . 
C 3 HOH A 30 430 32 HOH HOH . 
C 3 HOH A 31 431 33 HOH HOH . 
C 3 HOH A 32 432 34 HOH HOH . 
C 3 HOH A 33 433 35 HOH HOH . 
C 3 HOH A 34 434 36 HOH HOH . 
C 3 HOH A 35 435 37 HOH HOH . 
C 3 HOH A 36 436 38 HOH HOH . 
C 3 HOH A 37 437 39 HOH HOH . 
C 3 HOH A 38 438 40 HOH HOH . 
C 3 HOH A 39 439 41 HOH HOH . 
C 3 HOH A 40 440 43 HOH HOH . 
C 3 HOH A 41 441 45 HOH HOH . 
C 3 HOH A 42 442 46 HOH HOH . 
C 3 HOH A 43 443 47 HOH HOH . 
C 3 HOH A 44 444 48 HOH HOH . 
C 3 HOH A 45 445 49 HOH HOH . 
C 3 HOH A 46 446 50 HOH HOH . 
C 3 HOH A 47 447 51 HOH HOH . 
C 3 HOH A 48 448 52 HOH HOH . 
C 3 HOH A 49 449 53 HOH HOH . 
C 3 HOH A 50 450 54 HOH HOH . 
C 3 HOH A 51 451 55 HOH HOH . 
C 3 HOH A 52 452 56 HOH HOH . 
C 3 HOH A 53 453 57 HOH HOH . 
C 3 HOH A 54 454 58 HOH HOH . 
C 3 HOH A 55 455 59 HOH HOH . 
C 3 HOH A 56 456 60 HOH HOH . 
C 3 HOH A 57 457 61 HOH HOH . 
C 3 HOH A 58 458 62 HOH HOH . 
C 3 HOH A 59 459 63 HOH HOH . 
C 3 HOH A 60 460 64 HOH HOH . 
C 3 HOH A 61 461 65 HOH HOH . 
C 3 HOH A 62 462 66 HOH HOH . 
C 3 HOH A 63 463 67 HOH HOH . 
C 3 HOH A 64 464 68 HOH HOH . 
C 3 HOH A 65 465 69 HOH HOH . 
C 3 HOH A 66 466 70 HOH HOH . 
C 3 HOH A 67 467 71 HOH HOH . 
C 3 HOH A 68 468 72 HOH HOH . 
C 3 HOH A 69 469 73 HOH HOH . 
C 3 HOH A 70 470 74 HOH HOH . 
C 3 HOH A 71 471 75 HOH HOH . 
C 3 HOH A 72 472 76 HOH HOH . 
C 3 HOH A 73 473 77 HOH HOH . 
C 3 HOH A 74 474 78 HOH HOH . 
C 3 HOH A 75 475 79 HOH HOH . 
C 3 HOH A 76 476 80 HOH HOH . 
C 3 HOH A 77 477 81 HOH HOH . 
C 3 HOH A 78 478 82 HOH HOH . 
C 3 HOH A 79 479 83 HOH HOH . 
C 3 HOH A 80 480 84 HOH HOH . 
C 3 HOH A 81 481 85 HOH HOH . 
C 3 HOH A 82 482 86 HOH HOH . 
C 3 HOH A 83 483 87 HOH HOH . 
C 3 HOH A 84 484 88 HOH HOH . 
C 3 HOH A 85 485 89 HOH HOH . 
C 3 HOH A 86 486 90 HOH HOH . 
C 3 HOH A 87 487 91 HOH HOH . 
C 3 HOH A 88 488 92 HOH HOH . 
C 3 HOH A 89 489 93 HOH HOH . 
C 3 HOH A 90 490 94 HOH HOH . 
C 3 HOH A 91 491 95 HOH HOH . 
C 3 HOH A 92 492 96 HOH HOH . 
C 3 HOH A 93 493 97 HOH HOH . 
C 3 HOH A 94 494 98 HOH HOH . 
C 3 HOH A 95 495 99 HOH HOH . 
C 3 HOH A 96 496 100 HOH HOH . 
C 3 HOH A 97 497 102 HOH HOH . 
C 3 HOH A 98 498 103 HOH HOH . 
C 3 HOH A 99 499 104 HOH HOH . 
C 3 HOH A 100 500 105 HOH HOH . 
C 3 HOH A 101 501 107 HOH HOH . 
C 3 HOH A 102 502 108 HOH HOH . 
C 3 HOH A 103 503 109 HOH HOH . 
C 3 HOH A 104 504 110 HOH HOH . 
C 3 HOH A 105 505 111 HOH HOH . 
C 3 HOH A 106 506 112 HOH HOH . 
C 3 HOH A 107 507 113 HOH HOH . 
C 3 HOH A 108 508 114 HOH HOH . 
C 3 HOH A 109 509 115 HOH HOH . 
C 3 HOH A 110 510 116 HOH HOH . 
C 3 HOH A 111 511 117 HOH HOH . 
C 3 HOH A 112 512 118 HOH HOH . 
C 3 HOH A 113 513 119 HOH HOH . 
C 3 HOH A 114 514 120 HOH HOH . 
C 3 HOH A 115 515 121 HOH HOH . 
C 3 HOH A 116 516 122 HOH HOH . 
C 3 HOH A 117 517 123 HOH HOH . 
C 3 HOH A 118 518 124 HOH HOH . 
C 3 HOH A 119 519 125 HOH HOH . 
C 3 HOH A 120 520 126 HOH HOH . 
C 3 HOH A 121 521 127 HOH HOH . 
C 3 HOH A 122 522 128 HOH HOH . 
C 3 HOH A 123 523 129 HOH HOH . 
C 3 HOH A 124 524 130 HOH HOH . 
C 3 HOH A 125 525 131 HOH HOH . 
C 3 HOH A 126 526 132 HOH HOH . 
C 3 HOH A 127 527 133 HOH HOH . 
C 3 HOH A 128 528 134 HOH HOH . 
C 3 HOH A 129 529 135 HOH HOH . 
C 3 HOH A 130 530 136 HOH HOH . 
C 3 HOH A 131 531 137 HOH HOH . 
C 3 HOH A 132 532 139 HOH HOH . 
C 3 HOH A 133 533 140 HOH HOH . 
C 3 HOH A 134 534 141 HOH HOH . 
C 3 HOH A 135 535 142 HOH HOH . 
C 3 HOH A 136 536 143 HOH HOH . 
C 3 HOH A 137 537 144 HOH HOH . 
C 3 HOH A 138 538 146 HOH HOH . 
C 3 HOH A 139 539 148 HOH HOH . 
C 3 HOH A 140 540 150 HOH HOH . 
C 3 HOH A 141 541 151 HOH HOH . 
C 3 HOH A 142 542 152 HOH HOH . 
C 3 HOH A 143 543 153 HOH HOH . 
C 3 HOH A 144 544 154 HOH HOH . 
C 3 HOH A 145 545 155 HOH HOH . 
C 3 HOH A 146 546 156 HOH HOH . 
C 3 HOH A 147 547 157 HOH HOH . 
C 3 HOH A 148 548 159 HOH HOH . 
C 3 HOH A 149 549 160 HOH HOH . 
C 3 HOH A 150 550 161 HOH HOH . 
C 3 HOH A 151 551 162 HOH HOH . 
C 3 HOH A 152 552 164 HOH HOH . 
C 3 HOH A 153 553 165 HOH HOH . 
C 3 HOH A 154 554 166 HOH HOH . 
C 3 HOH A 155 555 167 HOH HOH . 
C 3 HOH A 156 556 169 HOH HOH . 
C 3 HOH A 157 557 170 HOH HOH . 
C 3 HOH A 158 558 171 HOH HOH . 
C 3 HOH A 159 559 172 HOH HOH . 
C 3 HOH A 160 560 174 HOH HOH . 
C 3 HOH A 161 561 175 HOH HOH . 
C 3 HOH A 162 562 176 HOH HOH . 
C 3 HOH A 163 563 180 HOH HOH . 
C 3 HOH A 164 564 181 HOH HOH . 
C 3 HOH A 165 565 182 HOH HOH . 
C 3 HOH A 166 566 183 HOH HOH . 
C 3 HOH A 167 567 184 HOH HOH . 
C 3 HOH A 168 568 185 HOH HOH . 
C 3 HOH A 169 569 186 HOH HOH . 
C 3 HOH A 170 570 187 HOH HOH . 
C 3 HOH A 171 571 188 HOH HOH . 
C 3 HOH A 172 572 189 HOH HOH . 
C 3 HOH A 173 573 190 HOH HOH . 
C 3 HOH A 174 574 191 HOH HOH . 
C 3 HOH A 175 575 193 HOH HOH . 
C 3 HOH A 176 576 196 HOH HOH . 
C 3 HOH A 177 577 197 HOH HOH . 
C 3 HOH A 178 578 201 HOH HOH . 
C 3 HOH A 179 579 202 HOH HOH . 
C 3 HOH A 180 580 203 HOH HOH . 
C 3 HOH A 181 581 204 HOH HOH . 
C 3 HOH A 182 582 207 HOH HOH . 
C 3 HOH A 183 583 208 HOH HOH . 
C 3 HOH A 184 584 209 HOH HOH . 
C 3 HOH A 185 585 211 HOH HOH . 
C 3 HOH A 186 586 212 HOH HOH . 
C 3 HOH A 187 587 213 HOH HOH . 
C 3 HOH A 188 588 215 HOH HOH . 
C 3 HOH A 189 589 217 HOH HOH . 
C 3 HOH A 190 590 220 HOH HOH . 
C 3 HOH A 191 591 221 HOH HOH . 
C 3 HOH A 192 592 223 HOH HOH . 
C 3 HOH A 193 593 224 HOH HOH . 
C 3 HOH A 194 594 225 HOH HOH . 
C 3 HOH A 195 595 227 HOH HOH . 
C 3 HOH A 196 596 228 HOH HOH . 
C 3 HOH A 197 597 231 HOH HOH . 
C 3 HOH A 198 598 232 HOH HOH . 
C 3 HOH A 199 599 234 HOH HOH . 
C 3 HOH A 200 600 236 HOH HOH . 
C 3 HOH A 201 601 238 HOH HOH . 
C 3 HOH A 202 602 241 HOH HOH . 
C 3 HOH A 203 603 244 HOH HOH . 
C 3 HOH A 204 604 250 HOH HOH . 
C 3 HOH A 205 605 254 HOH HOH . 
C 3 HOH A 206 606 257 HOH HOH . 
C 3 HOH A 207 607 258 HOH HOH . 
C 3 HOH A 208 608 264 HOH HOH . 
C 3 HOH A 209 609 265 HOH HOH . 
C 3 HOH A 210 610 266 HOH HOH . 
C 3 HOH A 211 611 272 HOH HOH . 
C 3 HOH A 212 612 273 HOH HOH . 
C 3 HOH A 213 613 274 HOH HOH . 
C 3 HOH A 214 614 281 HOH HOH . 
C 3 HOH A 215 615 283 HOH HOH . 
C 3 HOH A 216 616 286 HOH HOH . 
C 3 HOH A 217 617 288 HOH HOH . 
C 3 HOH A 218 618 292 HOH HOH . 
C 3 HOH A 219 619 293 HOH HOH . 
C 3 HOH A 220 620 294 HOH HOH . 
C 3 HOH A 221 621 295 HOH HOH . 
C 3 HOH A 222 622 307 HOH HOH . 
C 3 HOH A 223 623 308 HOH HOH . 
C 3 HOH A 224 624 317 HOH HOH . 
C 3 HOH A 225 625 322 HOH HOH . 
C 3 HOH A 226 626 323 HOH HOH . 
C 3 HOH A 227 627 324 HOH HOH . 
C 3 HOH A 228 628 325 HOH HOH . 
C 3 HOH A 229 629 328 HOH HOH . 
C 3 HOH A 230 630 330 HOH HOH . 
C 3 HOH A 231 631 333 HOH HOH . 
C 3 HOH A 232 632 341 HOH HOH . 
C 3 HOH A 233 633 343 HOH HOH . 
C 3 HOH A 234 634 348 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MRD . . . B 2 7.51 -16.772 24.518 1 10.53 ? C1 MRD 301 A 1 
HETATM 2 C C2 MRD . . . B 2 9.016 -16.606 24.517 1 15.13 ? C2 MRD 301 A 1 
HETATM 3 O O2 MRD . . . B 2 9.307 -15.188 24.698 1 21.15 ? O2 MRD 301 A 1 
HETATM 4 C CM MRD . . . B 2 9.575 -17.378 25.709 1 18.54 ? CM MRD 301 A 1 
HETATM 5 C C3 MRD . . . B 2 9.591 -17.194 23.225 1 15.59 ? C3 MRD 301 A 1 
HETATM 6 C C4 MRD . . . B 2 8.988 -16.683 21.918 1 14.36 ? C4 MRD 301 A 1 
HETATM 7 O O4 MRD . . . B 2 7.629 -17.071 21.791 1 12.54 ? O4 MRD 301 A 1 
HETATM 8 C C5 MRD . . . B 2 9.748 -17.194 20.698 1 12.85 ? C5 MRD 301 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           382 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#