data_3RMS # _model_server_result.job_id w8RyWiErr0VjZ4PkBV6v7A _model_server_result.datetime_utc '2025-03-04 14:47:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rms # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":114}' # _entry.id 3RMS # _exptl.entry_id 3RMS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.77 _cell.angle_gamma 90 _cell.entry_id 3RMS _cell.length_a 44.63 _cell.length_b 60.968 _cell.length_c 73.209 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RMS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,M 1 1 B,F,G,H,I,J,N 2 1 C,K,L,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 112 A ARG 109 1_555 A N MSE 113 A MSE 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 B C MSE 4 B MSE 1 1_555 B N GLN 5 B GLN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 B C ARG 112 B ARG 109 1_555 B N MSE 113 B MSE 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 A ND1 HIS 17 A HIS 14 1_555 D ZN ZN . A ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc2 A SG CYS 36 A CYS 33 1_555 D ZN ZN . A ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc3 A SG CYS 59 A CYS 56 1_555 D ZN ZN . A ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc4 A SG CYS 62 A CYS 59 1_555 D ZN ZN . A ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc5 B ND1 HIS 17 B HIS 14 1_555 F ZN ZN . B ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc6 B SG CYS 36 B CYS 33 1_555 F ZN ZN . B ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc7 B SG CYS 59 B CYS 56 1_555 F ZN ZN . B ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc8 B SG CYS 62 B CYS 59 1_555 F ZN ZN . B ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc9 C ND1 HIS 17 C HIS 14 1_555 K ZN ZN . C ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc10 C SG CYS 36 C CYS 33 1_555 K ZN ZN . C ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc11 C SG CYS 59 C CYS 56 1_555 K ZN ZN . C ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc12 C SG CYS 62 C CYS 59 1_555 K ZN ZN . C ZN 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3RMS _atom_sites.fract_transf_matrix[1][1] 0.022406 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002658 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016402 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013755 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 114 1 ZN ZN . E 3 GOL A 1 115 11 GOL GOL . F 2 ZN B 1 114 1 ZN ZN . G 3 GOL B 1 115 1 GOL GOL . H 3 GOL B 1 116 21 GOL GOL . I 3 GOL B 1 117 31 GOL GOL . J 3 GOL B 1 118 61 GOL GOL . K 2 ZN C 1 114 1 ZN ZN . L 3 GOL C 1 115 41 GOL GOL . M 4 HOH A 1 116 4 HOH HOH . M 4 HOH A 2 117 6 HOH HOH . M 4 HOH A 3 118 12 HOH HOH . M 4 HOH A 4 119 19 HOH HOH . M 4 HOH A 5 120 20 HOH HOH . M 4 HOH A 6 121 21 HOH HOH . M 4 HOH A 7 122 26 HOH HOH . M 4 HOH A 8 123 28 HOH HOH . M 4 HOH A 9 124 33 HOH HOH . M 4 HOH A 10 125 36 HOH HOH . M 4 HOH A 11 126 38 HOH HOH . M 4 HOH A 12 127 39 HOH HOH . M 4 HOH A 13 128 40 HOH HOH . M 4 HOH A 14 129 43 HOH HOH . M 4 HOH A 15 130 44 HOH HOH . M 4 HOH A 16 131 46 HOH HOH . M 4 HOH A 17 132 49 HOH HOH . M 4 HOH A 18 133 50 HOH HOH . M 4 HOH A 19 134 51 HOH HOH . M 4 HOH A 20 135 55 HOH HOH . M 4 HOH A 21 136 59 HOH HOH . M 4 HOH A 22 137 61 HOH HOH . M 4 HOH A 23 138 62 HOH HOH . N 4 HOH B 1 119 2 HOH HOH . N 4 HOH B 2 120 3 HOH HOH . N 4 HOH B 3 121 8 HOH HOH . N 4 HOH B 4 122 9 HOH HOH . N 4 HOH B 5 123 10 HOH HOH . N 4 HOH B 6 124 17 HOH HOH . N 4 HOH B 7 125 23 HOH HOH . N 4 HOH B 8 126 30 HOH HOH . N 4 HOH B 9 127 34 HOH HOH . N 4 HOH B 10 128 35 HOH HOH . N 4 HOH B 11 129 41 HOH HOH . N 4 HOH B 12 130 42 HOH HOH . N 4 HOH B 13 131 45 HOH HOH . N 4 HOH B 14 132 47 HOH HOH . N 4 HOH B 15 133 48 HOH HOH . N 4 HOH B 16 134 52 HOH HOH . N 4 HOH B 17 135 53 HOH HOH . N 4 HOH B 18 136 54 HOH HOH . N 4 HOH B 19 137 63 HOH HOH . N 4 HOH B 20 138 64 HOH HOH . N 4 HOH B 21 139 65 HOH HOH . N 4 HOH B 22 140 66 HOH HOH . N 4 HOH B 23 141 67 HOH HOH . O 4 HOH C 1 116 1 HOH HOH . O 4 HOH C 2 117 5 HOH HOH . O 4 HOH C 3 118 7 HOH HOH . O 4 HOH C 4 119 11 HOH HOH . O 4 HOH C 5 120 13 HOH HOH . O 4 HOH C 6 121 14 HOH HOH . O 4 HOH C 7 122 15 HOH HOH . O 4 HOH C 8 123 16 HOH HOH . O 4 HOH C 9 124 18 HOH HOH . O 4 HOH C 10 125 22 HOH HOH . O 4 HOH C 11 126 24 HOH HOH . O 4 HOH C 12 127 25 HOH HOH . O 4 HOH C 13 128 27 HOH HOH . O 4 HOH C 14 129 29 HOH HOH . O 4 HOH C 15 130 31 HOH HOH . O 4 HOH C 16 131 32 HOH HOH . O 4 HOH C 17 132 37 HOH HOH . O 4 HOH C 18 133 56 HOH HOH . O 4 HOH C 19 134 57 HOH HOH . O 4 HOH C 20 135 58 HOH HOH . O 4 HOH C 21 136 60 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -6.258 _atom_site.Cartn_y 12.324 _atom_site.Cartn_z -7.163 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.88 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 114 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #