data_3RMW # _model_server_result.job_id DbCa4lEk6j8wa2UGp8JNAg _model_server_result.datetime_utc '2024-11-16 08:52:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rmw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":264}' # _entry.id 3RMW # _exptl.entry_id 3RMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RMW _cell.length_a 56.65 _cell.length_b 100.61 _cell.length_c 49.1 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 56.65 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 103 A ASP 102 1_555 C MN MN . A MN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc2 A OD1 ASP 105 A ASP 104 1_555 C MN MN . A MN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc3 A OD2 ASP 105 A ASP 104 1_555 C MN MN . A MN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc4 A NE2 HIS 152 A HIS 151 1_555 D MG MG . A MG 265 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.073 ? metalc ? metalc5 A OE1 GLU 156 A GLU 155 1_555 D MG MG . A MG 265 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.909 ? metalc ? metalc6 A NE2 HIS 213 A HIS 212 1_555 C MN MN . A MN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc7 B O1B UPG . A UPG 263 1_555 C MN MN . A MN 264 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc8 B O1B UPG . A UPG 263 1_555 C MN MN . A MN 264 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc9 B O1A UPG . A UPG 263 1_555 C MN MN . A MN 264 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc10 B O1A UPG . A UPG 263 1_555 C MN MN . A MN 264 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc11 D MG MG . A MG 265 1_555 Q O HOH . A HOH 417 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc12 D MG MG . A MG 265 1_555 Q O HOH . A HOH 417 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc13 D MG MG . A MG 265 1_555 Q O HOH . A HOH 418 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.449 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3RMW _atom_sites.fract_transf_matrix[1][1] 0.017652 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UPG A 1 263 1 UPG UPG . C 3 MN A 1 264 2 MN MN . D 4 MG A 1 265 1 MG MG . E 5 EDO A 1 266 2 EDO EDO . F 5 EDO A 1 267 3 EDO EDO . G 5 EDO A 1 268 4 EDO EDO . H 5 EDO A 1 269 5 EDO EDO . I 5 EDO A 1 270 6 EDO EDO . J 5 EDO A 1 271 7 EDO EDO . K 5 EDO A 1 272 8 EDO EDO . L 5 EDO A 1 273 9 EDO EDO . M 5 EDO A 1 274 10 EDO EDO . N 5 EDO A 1 275 11 EDO EDO . O 5 EDO A 1 276 12 EDO EDO . P 5 EDO A 1 277 13 EDO EDO . Q 6 HOH A 1 278 1 HOH HOH . Q 6 HOH A 2 279 2 HOH HOH . Q 6 HOH A 3 280 3 HOH HOH . Q 6 HOH A 4 281 5 HOH HOH . Q 6 HOH A 5 282 6 HOH HOH . Q 6 HOH A 6 283 7 HOH HOH . Q 6 HOH A 7 284 8 HOH HOH . Q 6 HOH A 8 285 9 HOH HOH . Q 6 HOH A 9 286 10 HOH HOH . Q 6 HOH A 10 287 11 HOH HOH . Q 6 HOH A 11 288 12 HOH HOH . Q 6 HOH A 12 289 13 HOH HOH . Q 6 HOH A 13 290 14 HOH HOH . Q 6 HOH A 14 291 15 HOH HOH . Q 6 HOH A 15 292 16 HOH HOH . Q 6 HOH A 16 293 17 HOH HOH . Q 6 HOH A 17 294 19 HOH HOH . Q 6 HOH A 18 295 20 HOH HOH . Q 6 HOH A 19 296 21 HOH HOH . Q 6 HOH A 20 297 23 HOH HOH . Q 6 HOH A 21 298 24 HOH HOH . Q 6 HOH A 22 299 26 HOH HOH . Q 6 HOH A 23 300 28 HOH HOH . Q 6 HOH A 24 301 30 HOH HOH . Q 6 HOH A 25 302 31 HOH HOH . Q 6 HOH A 26 303 32 HOH HOH . Q 6 HOH A 27 304 33 HOH HOH . Q 6 HOH A 28 305 34 HOH HOH . Q 6 HOH A 29 306 35 HOH HOH . Q 6 HOH A 30 307 36 HOH HOH . Q 6 HOH A 31 308 37 HOH HOH . Q 6 HOH A 32 309 38 HOH HOH . Q 6 HOH A 33 310 39 HOH HOH . Q 6 HOH A 34 311 40 HOH HOH . Q 6 HOH A 35 312 42 HOH HOH . Q 6 HOH A 36 313 43 HOH HOH . Q 6 HOH A 37 314 46 HOH HOH . Q 6 HOH A 38 315 47 HOH HOH . Q 6 HOH A 39 316 50 HOH HOH . Q 6 HOH A 40 317 52 HOH HOH . Q 6 HOH A 41 318 53 HOH HOH . Q 6 HOH A 42 319 54 HOH HOH . Q 6 HOH A 43 320 55 HOH HOH . Q 6 HOH A 44 321 57 HOH HOH . Q 6 HOH A 45 322 60 HOH HOH . Q 6 HOH A 46 323 62 HOH HOH . Q 6 HOH A 47 324 63 HOH HOH . Q 6 HOH A 48 325 64 HOH HOH . Q 6 HOH A 49 326 65 HOH HOH . Q 6 HOH A 50 327 66 HOH HOH . Q 6 HOH A 51 328 67 HOH HOH . Q 6 HOH A 52 329 68 HOH HOH . Q 6 HOH A 53 330 70 HOH HOH . Q 6 HOH A 54 331 71 HOH HOH . Q 6 HOH A 55 332 74 HOH HOH . Q 6 HOH A 56 333 75 HOH HOH . Q 6 HOH A 57 334 76 HOH HOH . Q 6 HOH A 58 335 77 HOH HOH . Q 6 HOH A 59 336 78 HOH HOH . Q 6 HOH A 60 337 79 HOH HOH . Q 6 HOH A 61 338 82 HOH HOH . Q 6 HOH A 62 339 83 HOH HOH . Q 6 HOH A 63 340 84 HOH HOH . Q 6 HOH A 64 341 85 HOH HOH . Q 6 HOH A 65 342 86 HOH HOH . Q 6 HOH A 66 343 87 HOH HOH . Q 6 HOH A 67 344 88 HOH HOH . Q 6 HOH A 68 345 89 HOH HOH . Q 6 HOH A 69 346 90 HOH HOH . Q 6 HOH A 70 347 91 HOH HOH . Q 6 HOH A 71 348 92 HOH HOH . Q 6 HOH A 72 349 95 HOH HOH . Q 6 HOH A 73 350 96 HOH HOH . Q 6 HOH A 74 351 97 HOH HOH . Q 6 HOH A 75 352 100 HOH HOH . Q 6 HOH A 76 353 101 HOH HOH . Q 6 HOH A 77 354 102 HOH HOH . Q 6 HOH A 78 355 103 HOH HOH . Q 6 HOH A 79 356 104 HOH HOH . Q 6 HOH A 80 357 110 HOH HOH . Q 6 HOH A 81 358 112 HOH HOH . Q 6 HOH A 82 359 113 HOH HOH . Q 6 HOH A 83 360 114 HOH HOH . Q 6 HOH A 84 361 115 HOH HOH . Q 6 HOH A 85 362 119 HOH HOH . Q 6 HOH A 86 363 120 HOH HOH . Q 6 HOH A 87 364 122 HOH HOH . Q 6 HOH A 88 365 123 HOH HOH . Q 6 HOH A 89 366 124 HOH HOH . Q 6 HOH A 90 367 125 HOH HOH . Q 6 HOH A 91 368 126 HOH HOH . Q 6 HOH A 92 369 127 HOH HOH . Q 6 HOH A 93 370 128 HOH HOH . Q 6 HOH A 94 371 129 HOH HOH . Q 6 HOH A 95 372 130 HOH HOH . Q 6 HOH A 96 373 131 HOH HOH . Q 6 HOH A 97 374 132 HOH HOH . Q 6 HOH A 98 375 134 HOH HOH . Q 6 HOH A 99 376 135 HOH HOH . Q 6 HOH A 100 377 136 HOH HOH . Q 6 HOH A 101 378 137 HOH HOH . Q 6 HOH A 102 379 138 HOH HOH . Q 6 HOH A 103 380 139 HOH HOH . Q 6 HOH A 104 381 140 HOH HOH . Q 6 HOH A 105 382 141 HOH HOH . Q 6 HOH A 106 383 142 HOH HOH . Q 6 HOH A 107 384 143 HOH HOH . Q 6 HOH A 108 385 144 HOH HOH . Q 6 HOH A 109 386 145 HOH HOH . Q 6 HOH A 110 387 146 HOH HOH . Q 6 HOH A 111 388 149 HOH HOH . Q 6 HOH A 112 389 150 HOH HOH . Q 6 HOH A 113 390 151 HOH HOH . Q 6 HOH A 114 391 152 HOH HOH . Q 6 HOH A 115 392 153 HOH HOH . Q 6 HOH A 116 393 157 HOH HOH . Q 6 HOH A 117 394 158 HOH HOH . Q 6 HOH A 118 395 159 HOH HOH . Q 6 HOH A 119 396 161 HOH HOH . Q 6 HOH A 120 397 162 HOH HOH . Q 6 HOH A 121 398 163 HOH HOH . Q 6 HOH A 122 399 165 HOH HOH . Q 6 HOH A 123 400 166 HOH HOH . Q 6 HOH A 124 401 167 HOH HOH . Q 6 HOH A 125 402 168 HOH HOH . Q 6 HOH A 126 403 169 HOH HOH . Q 6 HOH A 127 404 170 HOH HOH . Q 6 HOH A 128 405 171 HOH HOH . Q 6 HOH A 129 406 172 HOH HOH . Q 6 HOH A 130 407 173 HOH HOH . Q 6 HOH A 131 408 175 HOH HOH . Q 6 HOH A 132 409 176 HOH HOH . Q 6 HOH A 133 410 177 HOH HOH . Q 6 HOH A 134 411 179 HOH HOH . Q 6 HOH A 135 412 180 HOH HOH . Q 6 HOH A 136 413 181 HOH HOH . Q 6 HOH A 137 414 182 HOH HOH . Q 6 HOH A 138 415 183 HOH HOH . Q 6 HOH A 139 416 184 HOH HOH . Q 6 HOH A 140 417 185 HOH HOH . Q 6 HOH A 141 418 186 HOH HOH . Q 6 HOH A 142 419 187 HOH HOH . Q 6 HOH A 143 420 189 HOH HOH . Q 6 HOH A 144 421 190 HOH HOH . Q 6 HOH A 145 422 192 HOH HOH . Q 6 HOH A 146 423 193 HOH HOH . Q 6 HOH A 147 424 194 HOH HOH . Q 6 HOH A 148 425 195 HOH HOH . Q 6 HOH A 149 426 196 HOH HOH . Q 6 HOH A 150 427 197 HOH HOH . Q 6 HOH A 151 428 198 HOH HOH . Q 6 HOH A 152 429 199 HOH HOH . Q 6 HOH A 153 430 200 HOH HOH . Q 6 HOH A 154 431 201 HOH HOH . Q 6 HOH A 155 432 202 HOH HOH . Q 6 HOH A 156 433 203 HOH HOH . Q 6 HOH A 157 434 204 HOH HOH . Q 6 HOH A 158 435 205 HOH HOH . Q 6 HOH A 159 436 206 HOH HOH . Q 6 HOH A 160 437 207 HOH HOH . Q 6 HOH A 161 438 208 HOH HOH . Q 6 HOH A 162 439 209 HOH HOH . Q 6 HOH A 163 440 212 HOH HOH . Q 6 HOH A 164 441 213 HOH HOH . Q 6 HOH A 165 442 214 HOH HOH . Q 6 HOH A 166 443 215 HOH HOH . Q 6 HOH A 167 444 216 HOH HOH . Q 6 HOH A 168 445 217 HOH HOH . Q 6 HOH A 169 446 218 HOH HOH . Q 6 HOH A 170 447 219 HOH HOH . Q 6 HOH A 171 448 220 HOH HOH . Q 6 HOH A 172 449 221 HOH HOH . Q 6 HOH A 173 450 222 HOH HOH . Q 6 HOH A 174 451 223 HOH HOH . Q 6 HOH A 175 452 224 HOH HOH . Q 6 HOH A 176 453 225 HOH HOH . Q 6 HOH A 177 454 226 HOH HOH . Q 6 HOH A 178 455 227 HOH HOH . Q 6 HOH A 179 456 228 HOH HOH . Q 6 HOH A 180 457 229 HOH HOH . Q 6 HOH A 181 458 230 HOH HOH . Q 6 HOH A 182 459 231 HOH HOH . Q 6 HOH A 183 460 232 HOH HOH . Q 6 HOH A 184 461 234 HOH HOH . Q 6 HOH A 185 462 235 HOH HOH . Q 6 HOH A 186 463 237 HOH HOH . Q 6 HOH A 187 464 238 HOH HOH . Q 6 HOH A 188 465 239 HOH HOH . Q 6 HOH A 189 466 240 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 19.47 _atom_site.Cartn_y 12.138 _atom_site.Cartn_z 5.336 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 264 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #