data_3RMW
#
_model_server_result.job_id            3x_H8GtRMIjZ8xTdCpCGRA 
_model_server_result.datetime_utc      '2024-11-16 08:41:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rmw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":266}' 
#
_entry.id    3RMW 
#
_exptl.entry_id    3RMW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3RMW 
_cell.length_a            56.65 
_cell.length_b            100.61 
_cell.length_c            49.1 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RMW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 56.65 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 M N N 
? 5 N N N 
? 5 O N N 
? 5 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 103 A ASP 102 1_555 C MN MN . A MN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? 
metalc ? metalc2 A OD1 ASP 105 A ASP 104 1_555 C MN MN . A MN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc3 A OD2 ASP 105 A ASP 104 1_555 C MN MN . A MN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc4 A NE2 HIS 152 A HIS 151 1_555 D MG MG . A MG 265 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc5 A OE1 GLU 156 A GLU 155 1_555 D MG MG . A MG 265 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.909 ? 
metalc ? metalc6 A NE2 HIS 213 A HIS 212 1_555 C MN MN . A MN 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? 
metalc ? metalc7 B O1B UPG . A UPG 263 1_555 C MN MN . A MN 264 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.97 ? 
metalc ? metalc8 B O1B UPG . A UPG 263 1_555 C MN MN . A MN 264 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.978 ? 
metalc ? metalc9 B O1A UPG . A UPG 263 1_555 C MN MN . A MN 264 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.981 ? 
metalc ? metalc10 B O1A UPG . A UPG 263 1_555 C MN MN . A MN 264 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.983 ? 
metalc ? metalc11 D MG MG . A MG 265 1_555 Q O HOH . A HOH 417 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.918 ? 
metalc ? metalc12 D MG MG . A MG 265 1_555 Q O HOH . A HOH 417 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.569 ? 
metalc ? metalc13 D MG MG . A MG 265 1_555 Q O HOH . A HOH 418 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.449 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3RMW 
_atom_sites.fract_transf_matrix[1][1]    0.017652 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009939 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020367 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 UPG A 1 263 1 UPG UPG . 
C 3 MN A 1 264 2 MN MN . 
D 4 MG A 1 265 1 MG MG . 
E 5 EDO A 1 266 2 EDO EDO . 
F 5 EDO A 1 267 3 EDO EDO . 
G 5 EDO A 1 268 4 EDO EDO . 
H 5 EDO A 1 269 5 EDO EDO . 
I 5 EDO A 1 270 6 EDO EDO . 
J 5 EDO A 1 271 7 EDO EDO . 
K 5 EDO A 1 272 8 EDO EDO . 
L 5 EDO A 1 273 9 EDO EDO . 
M 5 EDO A 1 274 10 EDO EDO . 
N 5 EDO A 1 275 11 EDO EDO . 
O 5 EDO A 1 276 12 EDO EDO . 
P 5 EDO A 1 277 13 EDO EDO . 
Q 6 HOH A 1 278 1 HOH HOH . 
Q 6 HOH A 2 279 2 HOH HOH . 
Q 6 HOH A 3 280 3 HOH HOH . 
Q 6 HOH A 4 281 5 HOH HOH . 
Q 6 HOH A 5 282 6 HOH HOH . 
Q 6 HOH A 6 283 7 HOH HOH . 
Q 6 HOH A 7 284 8 HOH HOH . 
Q 6 HOH A 8 285 9 HOH HOH . 
Q 6 HOH A 9 286 10 HOH HOH . 
Q 6 HOH A 10 287 11 HOH HOH . 
Q 6 HOH A 11 288 12 HOH HOH . 
Q 6 HOH A 12 289 13 HOH HOH . 
Q 6 HOH A 13 290 14 HOH HOH . 
Q 6 HOH A 14 291 15 HOH HOH . 
Q 6 HOH A 15 292 16 HOH HOH . 
Q 6 HOH A 16 293 17 HOH HOH . 
Q 6 HOH A 17 294 19 HOH HOH . 
Q 6 HOH A 18 295 20 HOH HOH . 
Q 6 HOH A 19 296 21 HOH HOH . 
Q 6 HOH A 20 297 23 HOH HOH . 
Q 6 HOH A 21 298 24 HOH HOH . 
Q 6 HOH A 22 299 26 HOH HOH . 
Q 6 HOH A 23 300 28 HOH HOH . 
Q 6 HOH A 24 301 30 HOH HOH . 
Q 6 HOH A 25 302 31 HOH HOH . 
Q 6 HOH A 26 303 32 HOH HOH . 
Q 6 HOH A 27 304 33 HOH HOH . 
Q 6 HOH A 28 305 34 HOH HOH . 
Q 6 HOH A 29 306 35 HOH HOH . 
Q 6 HOH A 30 307 36 HOH HOH . 
Q 6 HOH A 31 308 37 HOH HOH . 
Q 6 HOH A 32 309 38 HOH HOH . 
Q 6 HOH A 33 310 39 HOH HOH . 
Q 6 HOH A 34 311 40 HOH HOH . 
Q 6 HOH A 35 312 42 HOH HOH . 
Q 6 HOH A 36 313 43 HOH HOH . 
Q 6 HOH A 37 314 46 HOH HOH . 
Q 6 HOH A 38 315 47 HOH HOH . 
Q 6 HOH A 39 316 50 HOH HOH . 
Q 6 HOH A 40 317 52 HOH HOH . 
Q 6 HOH A 41 318 53 HOH HOH . 
Q 6 HOH A 42 319 54 HOH HOH . 
Q 6 HOH A 43 320 55 HOH HOH . 
Q 6 HOH A 44 321 57 HOH HOH . 
Q 6 HOH A 45 322 60 HOH HOH . 
Q 6 HOH A 46 323 62 HOH HOH . 
Q 6 HOH A 47 324 63 HOH HOH . 
Q 6 HOH A 48 325 64 HOH HOH . 
Q 6 HOH A 49 326 65 HOH HOH . 
Q 6 HOH A 50 327 66 HOH HOH . 
Q 6 HOH A 51 328 67 HOH HOH . 
Q 6 HOH A 52 329 68 HOH HOH . 
Q 6 HOH A 53 330 70 HOH HOH . 
Q 6 HOH A 54 331 71 HOH HOH . 
Q 6 HOH A 55 332 74 HOH HOH . 
Q 6 HOH A 56 333 75 HOH HOH . 
Q 6 HOH A 57 334 76 HOH HOH . 
Q 6 HOH A 58 335 77 HOH HOH . 
Q 6 HOH A 59 336 78 HOH HOH . 
Q 6 HOH A 60 337 79 HOH HOH . 
Q 6 HOH A 61 338 82 HOH HOH . 
Q 6 HOH A 62 339 83 HOH HOH . 
Q 6 HOH A 63 340 84 HOH HOH . 
Q 6 HOH A 64 341 85 HOH HOH . 
Q 6 HOH A 65 342 86 HOH HOH . 
Q 6 HOH A 66 343 87 HOH HOH . 
Q 6 HOH A 67 344 88 HOH HOH . 
Q 6 HOH A 68 345 89 HOH HOH . 
Q 6 HOH A 69 346 90 HOH HOH . 
Q 6 HOH A 70 347 91 HOH HOH . 
Q 6 HOH A 71 348 92 HOH HOH . 
Q 6 HOH A 72 349 95 HOH HOH . 
Q 6 HOH A 73 350 96 HOH HOH . 
Q 6 HOH A 74 351 97 HOH HOH . 
Q 6 HOH A 75 352 100 HOH HOH . 
Q 6 HOH A 76 353 101 HOH HOH . 
Q 6 HOH A 77 354 102 HOH HOH . 
Q 6 HOH A 78 355 103 HOH HOH . 
Q 6 HOH A 79 356 104 HOH HOH . 
Q 6 HOH A 80 357 110 HOH HOH . 
Q 6 HOH A 81 358 112 HOH HOH . 
Q 6 HOH A 82 359 113 HOH HOH . 
Q 6 HOH A 83 360 114 HOH HOH . 
Q 6 HOH A 84 361 115 HOH HOH . 
Q 6 HOH A 85 362 119 HOH HOH . 
Q 6 HOH A 86 363 120 HOH HOH . 
Q 6 HOH A 87 364 122 HOH HOH . 
Q 6 HOH A 88 365 123 HOH HOH . 
Q 6 HOH A 89 366 124 HOH HOH . 
Q 6 HOH A 90 367 125 HOH HOH . 
Q 6 HOH A 91 368 126 HOH HOH . 
Q 6 HOH A 92 369 127 HOH HOH . 
Q 6 HOH A 93 370 128 HOH HOH . 
Q 6 HOH A 94 371 129 HOH HOH . 
Q 6 HOH A 95 372 130 HOH HOH . 
Q 6 HOH A 96 373 131 HOH HOH . 
Q 6 HOH A 97 374 132 HOH HOH . 
Q 6 HOH A 98 375 134 HOH HOH . 
Q 6 HOH A 99 376 135 HOH HOH . 
Q 6 HOH A 100 377 136 HOH HOH . 
Q 6 HOH A 101 378 137 HOH HOH . 
Q 6 HOH A 102 379 138 HOH HOH . 
Q 6 HOH A 103 380 139 HOH HOH . 
Q 6 HOH A 104 381 140 HOH HOH . 
Q 6 HOH A 105 382 141 HOH HOH . 
Q 6 HOH A 106 383 142 HOH HOH . 
Q 6 HOH A 107 384 143 HOH HOH . 
Q 6 HOH A 108 385 144 HOH HOH . 
Q 6 HOH A 109 386 145 HOH HOH . 
Q 6 HOH A 110 387 146 HOH HOH . 
Q 6 HOH A 111 388 149 HOH HOH . 
Q 6 HOH A 112 389 150 HOH HOH . 
Q 6 HOH A 113 390 151 HOH HOH . 
Q 6 HOH A 114 391 152 HOH HOH . 
Q 6 HOH A 115 392 153 HOH HOH . 
Q 6 HOH A 116 393 157 HOH HOH . 
Q 6 HOH A 117 394 158 HOH HOH . 
Q 6 HOH A 118 395 159 HOH HOH . 
Q 6 HOH A 119 396 161 HOH HOH . 
Q 6 HOH A 120 397 162 HOH HOH . 
Q 6 HOH A 121 398 163 HOH HOH . 
Q 6 HOH A 122 399 165 HOH HOH . 
Q 6 HOH A 123 400 166 HOH HOH . 
Q 6 HOH A 124 401 167 HOH HOH . 
Q 6 HOH A 125 402 168 HOH HOH . 
Q 6 HOH A 126 403 169 HOH HOH . 
Q 6 HOH A 127 404 170 HOH HOH . 
Q 6 HOH A 128 405 171 HOH HOH . 
Q 6 HOH A 129 406 172 HOH HOH . 
Q 6 HOH A 130 407 173 HOH HOH . 
Q 6 HOH A 131 408 175 HOH HOH . 
Q 6 HOH A 132 409 176 HOH HOH . 
Q 6 HOH A 133 410 177 HOH HOH . 
Q 6 HOH A 134 411 179 HOH HOH . 
Q 6 HOH A 135 412 180 HOH HOH . 
Q 6 HOH A 136 413 181 HOH HOH . 
Q 6 HOH A 137 414 182 HOH HOH . 
Q 6 HOH A 138 415 183 HOH HOH . 
Q 6 HOH A 139 416 184 HOH HOH . 
Q 6 HOH A 140 417 185 HOH HOH . 
Q 6 HOH A 141 418 186 HOH HOH . 
Q 6 HOH A 142 419 187 HOH HOH . 
Q 6 HOH A 143 420 189 HOH HOH . 
Q 6 HOH A 144 421 190 HOH HOH . 
Q 6 HOH A 145 422 192 HOH HOH . 
Q 6 HOH A 146 423 193 HOH HOH . 
Q 6 HOH A 147 424 194 HOH HOH . 
Q 6 HOH A 148 425 195 HOH HOH . 
Q 6 HOH A 149 426 196 HOH HOH . 
Q 6 HOH A 150 427 197 HOH HOH . 
Q 6 HOH A 151 428 198 HOH HOH . 
Q 6 HOH A 152 429 199 HOH HOH . 
Q 6 HOH A 153 430 200 HOH HOH . 
Q 6 HOH A 154 431 201 HOH HOH . 
Q 6 HOH A 155 432 202 HOH HOH . 
Q 6 HOH A 156 433 203 HOH HOH . 
Q 6 HOH A 157 434 204 HOH HOH . 
Q 6 HOH A 158 435 205 HOH HOH . 
Q 6 HOH A 159 436 206 HOH HOH . 
Q 6 HOH A 160 437 207 HOH HOH . 
Q 6 HOH A 161 438 208 HOH HOH . 
Q 6 HOH A 162 439 209 HOH HOH . 
Q 6 HOH A 163 440 212 HOH HOH . 
Q 6 HOH A 164 441 213 HOH HOH . 
Q 6 HOH A 165 442 214 HOH HOH . 
Q 6 HOH A 166 443 215 HOH HOH . 
Q 6 HOH A 167 444 216 HOH HOH . 
Q 6 HOH A 168 445 217 HOH HOH . 
Q 6 HOH A 169 446 218 HOH HOH . 
Q 6 HOH A 170 447 219 HOH HOH . 
Q 6 HOH A 171 448 220 HOH HOH . 
Q 6 HOH A 172 449 221 HOH HOH . 
Q 6 HOH A 173 450 222 HOH HOH . 
Q 6 HOH A 174 451 223 HOH HOH . 
Q 6 HOH A 175 452 224 HOH HOH . 
Q 6 HOH A 176 453 225 HOH HOH . 
Q 6 HOH A 177 454 226 HOH HOH . 
Q 6 HOH A 178 455 227 HOH HOH . 
Q 6 HOH A 179 456 228 HOH HOH . 
Q 6 HOH A 180 457 229 HOH HOH . 
Q 6 HOH A 181 458 230 HOH HOH . 
Q 6 HOH A 182 459 231 HOH HOH . 
Q 6 HOH A 183 460 232 HOH HOH . 
Q 6 HOH A 184 461 234 HOH HOH . 
Q 6 HOH A 185 462 235 HOH HOH . 
Q 6 HOH A 186 463 237 HOH HOH . 
Q 6 HOH A 187 464 238 HOH HOH . 
Q 6 HOH A 188 465 239 HOH HOH . 
Q 6 HOH A 189 466 240 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 5 15.129 28.781 16.807 1 52.23 ? C1 EDO 266 A 1 
HETATM 2 O O1 EDO . . . E 5 14.609 29.801 17.668 1 51.75 ? O1 EDO 266 A 1 
HETATM 3 C C2 EDO . . . E 5 16.116 29.355 15.804 1 51.75 ? C2 EDO 266 A 1 
HETATM 4 O O2 EDO . . . E 5 17.066 30.165 16.499 1 53.02 ? O2 EDO 266 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#