data_3RN9
#
_model_server_result.job_id            teZmoZYzdsNuZP0ngQjuVw 
_model_server_result.datetime_utc      '2025-07-04 10:52:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rn9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":502}' 
#
_entry.id    3RN9 
#
_exptl.entry_id    3RN9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3RN9 
_cell.length_a            182.409 
_cell.length_b            182.409 
_cell.length_c            67.45 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RN9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? hexameric 6 author_defined_assembly 1 
PISA trimeric 3 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L 1 1,2 
A,B,C,D,E,F,G,H,I,J,K,L 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 22.483333 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 104 A GLU 104 1_555 E FE FE . A FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc2 A OE2 GLU 134 A GLU 134 1_555 D FE FE . A FE 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc3 A OE1 GLU 134 A GLU 134 1_555 E FE FE . A FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? 
metalc ? metalc4 A ND1 HIS 137 A HIS 137 1_555 E FE FE . A FE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc5 A OE2 GLU 197 A GLU 197 1_555 D FE FE . A FE 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? 
metalc ? metalc6 A OE2 GLU 231 A GLU 231 1_555 D FE FE . A FE 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc7 A NE2 HIS 234 A HIS 234 1_555 D FE FE . A FE 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc8 D FE FE . A FE 499 1_555 F O OH . A OH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc9 D FE FE . A FE 499 1_555 H O1 EDO . A EDO 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? 
metalc ? metalc10 E FE FE . A FE 500 1_555 F O OH . A OH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? 
metalc ? metalc11 E FE FE . A FE 500 1_555 H O1 EDO . A EDO 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc12 E FE FE . A FE 500 1_555 J O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 337 n n 
S O2 SO4 doub 338 n n 
S O3 SO4 sing 339 n n 
S O4 SO4 sing 340 n n 
#
_atom_sites.entry_id                     3RN9 
_atom_sites.fract_transf_matrix[1][1]    0.005482 
_atom_sites.fract_transf_matrix[1][2]    0.003165 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00633 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014826 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 FE A 1 499 1 FE FE . 
E 4 FE A 1 500 2 FE FE . 
F 5 OH A 1 501 275 OH OH . 
G 6 SO4 A 1 502 1 SO4 SO4 . 
H 7 EDO A 1 503 1 EDO EDO . 
I 8 1PE A 1 504 1 1PE 1PE . 
J 9 HOH A 1 505 1 HOH HOH . 
J 9 HOH A 2 506 2 HOH HOH . 
J 9 HOH A 3 507 5 HOH HOH . 
J 9 HOH A 4 508 7 HOH HOH . 
J 9 HOH A 5 509 9 HOH HOH . 
J 9 HOH A 6 510 10 HOH HOH . 
J 9 HOH A 7 511 11 HOH HOH . 
J 9 HOH A 8 512 12 HOH HOH . 
J 9 HOH A 9 513 15 HOH HOH . 
J 9 HOH A 10 514 16 HOH HOH . 
J 9 HOH A 11 515 20 HOH HOH . 
J 9 HOH A 12 516 22 HOH HOH . 
J 9 HOH A 13 517 23 HOH HOH . 
J 9 HOH A 14 518 25 HOH HOH . 
J 9 HOH A 15 519 27 HOH HOH . 
J 9 HOH A 16 520 28 HOH HOH . 
J 9 HOH A 17 521 29 HOH HOH . 
J 9 HOH A 18 522 31 HOH HOH . 
J 9 HOH A 19 523 33 HOH HOH . 
J 9 HOH A 20 524 34 HOH HOH . 
J 9 HOH A 21 525 35 HOH HOH . 
J 9 HOH A 22 526 36 HOH HOH . 
J 9 HOH A 23 527 41 HOH HOH . 
J 9 HOH A 24 528 43 HOH HOH . 
J 9 HOH A 25 529 45 HOH HOH . 
J 9 HOH A 26 530 47 HOH HOH . 
J 9 HOH A 27 531 48 HOH HOH . 
J 9 HOH A 28 532 52 HOH HOH . 
J 9 HOH A 29 533 53 HOH HOH . 
J 9 HOH A 30 534 55 HOH HOH . 
J 9 HOH A 31 535 57 HOH HOH . 
J 9 HOH A 32 536 58 HOH HOH . 
J 9 HOH A 33 537 59 HOH HOH . 
J 9 HOH A 34 538 63 HOH HOH . 
J 9 HOH A 35 539 65 HOH HOH . 
J 9 HOH A 36 540 67 HOH HOH . 
J 9 HOH A 37 541 71 HOH HOH . 
J 9 HOH A 38 542 77 HOH HOH . 
J 9 HOH A 39 543 78 HOH HOH . 
J 9 HOH A 40 544 79 HOH HOH . 
J 9 HOH A 41 545 83 HOH HOH . 
J 9 HOH A 42 546 85 HOH HOH . 
J 9 HOH A 43 547 86 HOH HOH . 
J 9 HOH A 44 548 87 HOH HOH . 
J 9 HOH A 45 549 89 HOH HOH . 
J 9 HOH A 46 550 91 HOH HOH . 
J 9 HOH A 47 551 96 HOH HOH . 
J 9 HOH A 48 552 99 HOH HOH . 
J 9 HOH A 49 553 100 HOH HOH . 
J 9 HOH A 50 554 104 HOH HOH . 
J 9 HOH A 51 555 107 HOH HOH . 
J 9 HOH A 52 556 108 HOH HOH . 
J 9 HOH A 53 557 109 HOH HOH . 
J 9 HOH A 54 558 110 HOH HOH . 
J 9 HOH A 55 559 111 HOH HOH . 
J 9 HOH A 56 560 113 HOH HOH . 
J 9 HOH A 57 561 127 HOH HOH . 
J 9 HOH A 58 562 129 HOH HOH . 
J 9 HOH A 59 563 130 HOH HOH . 
J 9 HOH A 60 564 133 HOH HOH . 
J 9 HOH A 61 565 144 HOH HOH . 
J 9 HOH A 62 566 146 HOH HOH . 
J 9 HOH A 63 567 149 HOH HOH . 
J 9 HOH A 64 568 150 HOH HOH . 
J 9 HOH A 65 569 151 HOH HOH . 
J 9 HOH A 66 570 152 HOH HOH . 
J 9 HOH A 67 571 157 HOH HOH . 
J 9 HOH A 68 572 160 HOH HOH . 
J 9 HOH A 69 573 162 HOH HOH . 
J 9 HOH A 70 574 163 HOH HOH . 
J 9 HOH A 71 575 164 HOH HOH . 
J 9 HOH A 72 576 171 HOH HOH . 
J 9 HOH A 73 577 175 HOH HOH . 
J 9 HOH A 74 578 177 HOH HOH . 
J 9 HOH A 75 579 178 HOH HOH . 
J 9 HOH A 76 580 180 HOH HOH . 
J 9 HOH A 77 581 181 HOH HOH . 
J 9 HOH A 78 582 188 HOH HOH . 
J 9 HOH A 79 583 189 HOH HOH . 
J 9 HOH A 80 584 191 HOH HOH . 
J 9 HOH A 81 585 205 HOH HOH . 
J 9 HOH A 82 586 209 HOH HOH . 
J 9 HOH A 83 587 210 HOH HOH . 
J 9 HOH A 84 588 211 HOH HOH . 
J 9 HOH A 85 589 215 HOH HOH . 
J 9 HOH A 86 590 217 HOH HOH . 
J 9 HOH A 87 591 221 HOH HOH . 
J 9 HOH A 88 592 227 HOH HOH . 
J 9 HOH A 89 593 238 HOH HOH . 
J 9 HOH A 90 594 241 HOH HOH . 
J 9 HOH A 91 595 243 HOH HOH . 
J 9 HOH A 92 596 245 HOH HOH . 
J 9 HOH A 93 597 248 HOH HOH . 
J 9 HOH A 94 598 258 HOH HOH . 
J 9 HOH A 95 599 261 HOH HOH . 
J 9 HOH A 96 600 264 HOH HOH . 
J 9 HOH A 97 601 267 HOH HOH . 
J 9 HOH A 98 602 269 HOH HOH . 
J 9 HOH A 99 603 270 HOH HOH . 
J 9 HOH A 100 604 271 HOH HOH . 
J 9 HOH A 101 605 273 HOH HOH . 
K 9 HOH B 1 331 13 HOH HOH . 
K 9 HOH B 2 332 14 HOH HOH . 
K 9 HOH B 3 333 17 HOH HOH . 
K 9 HOH B 4 334 21 HOH HOH . 
K 9 HOH B 5 335 24 HOH HOH . 
K 9 HOH B 6 336 30 HOH HOH . 
K 9 HOH B 7 337 32 HOH HOH . 
K 9 HOH B 8 338 37 HOH HOH . 
K 9 HOH B 9 339 39 HOH HOH . 
K 9 HOH B 10 340 42 HOH HOH . 
K 9 HOH B 11 341 44 HOH HOH . 
K 9 HOH B 12 342 46 HOH HOH . 
K 9 HOH B 13 343 49 HOH HOH . 
K 9 HOH B 14 344 50 HOH HOH . 
K 9 HOH B 15 345 51 HOH HOH . 
K 9 HOH B 16 346 54 HOH HOH . 
K 9 HOH B 17 347 60 HOH HOH . 
K 9 HOH B 18 348 61 HOH HOH . 
K 9 HOH B 19 349 62 HOH HOH . 
K 9 HOH B 20 350 64 HOH HOH . 
K 9 HOH B 21 351 69 HOH HOH . 
K 9 HOH B 22 352 72 HOH HOH . 
K 9 HOH B 23 353 73 HOH HOH . 
K 9 HOH B 24 354 75 HOH HOH . 
K 9 HOH B 25 355 76 HOH HOH . 
K 9 HOH B 26 356 81 HOH HOH . 
K 9 HOH B 27 357 88 HOH HOH . 
K 9 HOH B 28 358 90 HOH HOH . 
K 9 HOH B 29 359 95 HOH HOH . 
K 9 HOH B 30 360 98 HOH HOH . 
K 9 HOH B 31 361 101 HOH HOH . 
K 9 HOH B 32 362 105 HOH HOH . 
K 9 HOH B 33 363 115 HOH HOH . 
K 9 HOH B 34 364 117 HOH HOH . 
K 9 HOH B 35 365 119 HOH HOH . 
K 9 HOH B 36 366 120 HOH HOH . 
K 9 HOH B 37 367 121 HOH HOH . 
K 9 HOH B 38 368 122 HOH HOH . 
K 9 HOH B 39 369 124 HOH HOH . 
K 9 HOH B 40 370 126 HOH HOH . 
K 9 HOH B 41 371 132 HOH HOH . 
K 9 HOH B 42 372 138 HOH HOH . 
K 9 HOH B 43 373 139 HOH HOH . 
K 9 HOH B 44 374 140 HOH HOH . 
K 9 HOH B 45 375 141 HOH HOH . 
K 9 HOH B 46 376 142 HOH HOH . 
K 9 HOH B 47 377 143 HOH HOH . 
K 9 HOH B 48 378 147 HOH HOH . 
K 9 HOH B 49 379 156 HOH HOH . 
K 9 HOH B 50 380 158 HOH HOH . 
K 9 HOH B 51 381 159 HOH HOH . 
K 9 HOH B 52 382 165 HOH HOH . 
K 9 HOH B 53 383 168 HOH HOH . 
K 9 HOH B 54 384 174 HOH HOH . 
K 9 HOH B 55 385 176 HOH HOH . 
K 9 HOH B 56 386 179 HOH HOH . 
K 9 HOH B 57 387 184 HOH HOH . 
K 9 HOH B 58 388 202 HOH HOH . 
K 9 HOH B 59 389 208 HOH HOH . 
K 9 HOH B 60 390 212 HOH HOH . 
K 9 HOH B 61 391 216 HOH HOH . 
K 9 HOH B 62 392 218 HOH HOH . 
K 9 HOH B 63 393 232 HOH HOH . 
K 9 HOH B 64 394 233 HOH HOH . 
K 9 HOH B 65 395 234 HOH HOH . 
K 9 HOH B 66 396 236 HOH HOH . 
K 9 HOH B 67 397 240 HOH HOH . 
K 9 HOH B 68 398 254 HOH HOH . 
K 9 HOH B 69 399 256 HOH HOH . 
K 9 HOH B 70 400 260 HOH HOH . 
K 9 HOH B 71 401 265 HOH HOH . 
K 9 HOH B 72 402 266 HOH HOH . 
L 9 HOH C 1 87 8 HOH HOH . 
L 9 HOH C 2 88 26 HOH HOH . 
L 9 HOH C 3 89 38 HOH HOH . 
L 9 HOH C 4 90 56 HOH HOH . 
L 9 HOH C 5 91 82 HOH HOH . 
L 9 HOH C 6 128 128 HOH HOH . 
L 9 HOH C 7 135 135 HOH HOH . 
L 9 HOH C 8 185 185 HOH HOH . 
L 9 HOH C 9 186 186 HOH HOH . 
L 9 HOH C 10 213 213 HOH HOH . 
L 9 HOH C 11 253 253 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . G 6 6.663 -52.465 17.124 1 80.92 ? S SO4 502 A 1 
HETATM 2 O O1 SO4 . . . G 6 7.868 -53.039 16.511 1 81.06 ? O1 SO4 502 A 1 
HETATM 3 O O2 SO4 . . . G 6 5.608 -52.438 16.1 1 80.15 ? O2 SO4 502 A 1 
HETATM 4 O O3 SO4 . . . G 6 6.26 -53.24 18.3 1 79.63 ? O3 SO4 502 A 1 
HETATM 5 O O4 SO4 . . . G 6 6.972 -51.108 17.554 1 80.22 ? O4 SO4 502 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           391 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           5 
#