data_3ROU # _model_server_result.job_id Kej-IhWlfoEWL3xy7abonA _model_server_result.datetime_utc '2024-10-11 03:16:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rou # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 3ROU # _exptl.entry_id 3ROU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 329.206 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ROU _cell.length_a 46.02 _cell.length_b 93.47 _cell.length_c 104.65 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ROU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C10 H12 N5 O6 P' _chem_comp.formula_weight 329.206 _chem_comp.id CMP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CYCLIC AMP;CAMP' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P CMP doub 70 n n P O2P CMP sing 71 n n P O5' CMP sing 72 n n P O3' CMP sing 73 n n O2P HOP2 CMP sing 74 n n O5' C5' CMP sing 75 n n C5' C4' CMP sing 76 n n C5' "H5'1" CMP sing 77 n n C5' "H5'2" CMP sing 78 n n C4' O4' CMP sing 79 n n C4' C3' CMP sing 80 n n C4' H4' CMP sing 81 n n O4' C1' CMP sing 82 n n C3' O3' CMP sing 83 n n C3' C2' CMP sing 84 n n C3' H3' CMP sing 85 n n C2' O2' CMP sing 86 n n C2' C1' CMP sing 87 n n C2' H2' CMP sing 88 n n O2' HO2' CMP sing 89 n n C1' N9 CMP sing 90 n n C1' H1' CMP sing 91 n n N9 C8 CMP sing 92 n y N9 C4 CMP sing 93 n y C8 N7 CMP doub 94 n y C8 H8 CMP sing 95 n n N7 C5 CMP sing 96 n y C5 C6 CMP sing 97 n y C5 C4 CMP doub 98 n y C6 N6 CMP sing 99 n n C6 N1 CMP doub 100 n y N6 HN61 CMP sing 101 n n N6 HN62 CMP sing 102 n n N1 C2 CMP sing 103 n y C2 N3 CMP doub 104 n y C2 H2 CMP sing 105 n n N3 C4 CMP sing 106 n y # _atom_sites.entry_id 3ROU _atom_sites.fract_transf_matrix[1][1] 0.02173 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010699 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009556 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CMP A 1 301 301 CMP CMP . D 2 CMP A 1 302 302 CMP CMP . E 2 CMP B 1 401 401 CMP CMP . F 3 HOH A 1 210 2 HOH HOH . F 3 HOH A 2 211 3 HOH HOH . F 3 HOH A 3 212 5 HOH HOH . F 3 HOH A 4 213 7 HOH HOH . F 3 HOH A 5 214 9 HOH HOH . F 3 HOH A 6 215 11 HOH HOH . F 3 HOH A 7 216 15 HOH HOH . F 3 HOH A 8 217 18 HOH HOH . F 3 HOH A 9 218 23 HOH HOH . F 3 HOH A 10 219 24 HOH HOH . F 3 HOH A 11 220 25 HOH HOH . F 3 HOH A 12 221 27 HOH HOH . F 3 HOH A 13 222 30 HOH HOH . F 3 HOH A 14 223 33 HOH HOH . F 3 HOH A 15 224 34 HOH HOH . F 3 HOH A 16 225 36 HOH HOH . F 3 HOH A 17 226 37 HOH HOH . F 3 HOH A 18 227 42 HOH HOH . F 3 HOH A 19 228 46 HOH HOH . F 3 HOH A 20 229 48 HOH HOH . F 3 HOH A 21 230 49 HOH HOH . F 3 HOH A 22 231 51 HOH HOH . F 3 HOH A 23 232 52 HOH HOH . F 3 HOH A 24 233 54 HOH HOH . F 3 HOH A 25 234 57 HOH HOH . F 3 HOH A 26 235 58 HOH HOH . F 3 HOH A 27 236 60 HOH HOH . F 3 HOH A 28 237 64 HOH HOH . F 3 HOH A 29 238 66 HOH HOH . F 3 HOH A 30 239 68 HOH HOH . F 3 HOH A 31 240 70 HOH HOH . F 3 HOH A 32 241 73 HOH HOH . F 3 HOH A 33 242 75 HOH HOH . F 3 HOH A 34 243 76 HOH HOH . F 3 HOH A 35 244 77 HOH HOH . F 3 HOH A 36 245 79 HOH HOH . F 3 HOH A 37 246 81 HOH HOH . F 3 HOH A 38 247 1 HOH HOH . G 3 HOH B 1 211 4 HOH HOH . G 3 HOH B 2 212 6 HOH HOH . G 3 HOH B 3 213 8 HOH HOH . G 3 HOH B 4 214 10 HOH HOH . G 3 HOH B 5 215 12 HOH HOH . G 3 HOH B 6 216 13 HOH HOH . G 3 HOH B 7 217 14 HOH HOH . G 3 HOH B 8 218 16 HOH HOH . G 3 HOH B 9 219 17 HOH HOH . G 3 HOH B 10 220 19 HOH HOH . G 3 HOH B 11 221 20 HOH HOH . G 3 HOH B 12 222 21 HOH HOH . G 3 HOH B 13 223 22 HOH HOH . G 3 HOH B 14 224 26 HOH HOH . G 3 HOH B 15 225 28 HOH HOH . G 3 HOH B 16 226 29 HOH HOH . G 3 HOH B 17 227 31 HOH HOH . G 3 HOH B 18 228 32 HOH HOH . G 3 HOH B 19 229 35 HOH HOH . G 3 HOH B 20 230 38 HOH HOH . G 3 HOH B 21 231 39 HOH HOH . G 3 HOH B 22 232 40 HOH HOH . G 3 HOH B 23 233 41 HOH HOH . G 3 HOH B 24 234 43 HOH HOH . G 3 HOH B 25 235 44 HOH HOH . G 3 HOH B 26 236 45 HOH HOH . G 3 HOH B 27 237 47 HOH HOH . G 3 HOH B 28 238 50 HOH HOH . G 3 HOH B 29 239 53 HOH HOH . G 3 HOH B 30 240 55 HOH HOH . G 3 HOH B 31 241 56 HOH HOH . G 3 HOH B 32 242 59 HOH HOH . G 3 HOH B 33 243 61 HOH HOH . G 3 HOH B 34 244 62 HOH HOH . G 3 HOH B 35 245 63 HOH HOH . G 3 HOH B 36 246 65 HOH HOH . G 3 HOH B 37 247 67 HOH HOH . G 3 HOH B 38 248 69 HOH HOH . G 3 HOH B 39 249 71 HOH HOH . G 3 HOH B 40 250 72 HOH HOH . G 3 HOH B 41 251 74 HOH HOH . G 3 HOH B 42 252 78 HOH HOH . G 3 HOH B 43 253 80 HOH HOH . G 3 HOH B 44 254 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P CMP . . . C 2 39.21 41.466 51.494 1 25.97 ? P CMP 301 A 1 HETATM 2 O O1P CMP . . . C 2 38.903 40.488 50.376 1 25.78 ? O1P CMP 301 A 1 HETATM 3 O O2P CMP . . . C 2 39.489 40.986 52.862 1 27.34 ? O2P CMP 301 A 1 HETATM 4 O O5' CMP . . . C 2 40.584 42.083 50.867 1 27.37 ? O5' CMP 301 A 1 HETATM 5 C C5' CMP . . . C 2 40.693 43.296 50.056 1 26.35 ? C5' CMP 301 A 1 HETATM 6 C C4' CMP . . . C 2 39.436 44.151 49.911 1 27.14 ? C4' CMP 301 A 1 HETATM 7 O O4' CMP . . . C 2 39.174 44.714 48.655 1 26.43 ? O4' CMP 301 A 1 HETATM 8 C C3' CMP . . . C 2 38.157 43.416 50.259 1 25.53 ? C3' CMP 301 A 1 HETATM 9 O O3' CMP . . . C 2 38.146 42.697 51.511 1 27.41 ? O3' CMP 301 A 1 HETATM 10 C C2' CMP . . . C 2 37.208 44.499 50.037 1 25.79 ? C2' CMP 301 A 1 HETATM 11 O O2' CMP . . . C 2 37.31 45.43 51.111 1 23.67 ? O2' CMP 301 A 1 HETATM 12 C C1' CMP . . . C 2 37.879 45.26 48.827 1 25.14 ? C1' CMP 301 A 1 HETATM 13 N N9 CMP . . . C 2 37.171 44.859 47.627 1 26.55 ? N9 CMP 301 A 1 HETATM 14 C C8 CMP . . . C 2 37.364 43.692 46.848 1 25.24 ? C8 CMP 301 A 1 HETATM 15 N N7 CMP . . . C 2 36.535 43.602 45.82 1 25.82 ? N7 CMP 301 A 1 HETATM 16 C C5 CMP . . . C 2 35.758 44.776 45.915 1 24.46 ? C5 CMP 301 A 1 HETATM 17 C C6 CMP . . . C 2 34.724 45.293 45.136 1 24.73 ? C6 CMP 301 A 1 HETATM 18 N N6 CMP . . . C 2 34.301 44.669 44.047 1 24.14 ? N6 CMP 301 A 1 HETATM 19 N N1 CMP . . . C 2 34.138 46.502 45.515 1 24.53 ? N1 CMP 301 A 1 HETATM 20 C C2 CMP . . . C 2 34.594 47.135 46.608 1 25.06 ? C2 CMP 301 A 1 HETATM 21 N N3 CMP . . . C 2 35.577 46.769 47.437 1 25.19 ? N3 CMP 301 A 1 HETATM 22 C C4 CMP . . . C 2 36.131 45.547 47.015 1 25.01 ? C4 CMP 301 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #