data_3ROY # _model_server_result.job_id REXAc2OgqvnRQIuVQma1yw _model_server_result.datetime_utc '2024-11-26 12:00:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3roy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":781}' # _entry.id 3ROY # _exptl.entry_id 3ROY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 371.434 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(hexylamino)-5-nitro-2-[(pyridin-3-ylmethyl)amino]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3ROY _cell.length_a 53.63 _cell.length_b 71.58 _cell.length_c 72.66 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ROY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H25 N5 O3' _chem_comp.formula_weight 371.434 _chem_comp.id 22Z _chem_comp.mon_nstd_flag . _chem_comp.name 4-(hexylamino)-5-nitro-2-[(pyridin-3-ylmethyl)amino]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 C08 22Z sing 1 n n N01 C13 22Z sing 2 n n N01 HN01 22Z sing 3 n n N02 C12 22Z sing 4 n n N02 HN02 22Z sing 5 n n N02 HN0A 22Z sing 6 n n N03 C15 22Z doub 7 n y N03 C16 22Z sing 8 n y N04 C10 22Z sing 9 n n N04 C19 22Z sing 10 n n N04 HN04 22Z sing 11 n n N05 C11 22Z sing 12 n n N05 O26 22Z sing 13 n n N05 O27 22Z doub 14 n n C06 C07 22Z doub 15 n y C06 C11 22Z sing 16 n y C06 H06 22Z sing 17 n n C07 C08 22Z sing 18 n y C07 C12 22Z sing 19 n n C08 C09 22Z doub 20 n y C09 C10 22Z sing 21 n y C09 H09 22Z sing 22 n n C10 C11 22Z doub 23 n y C12 O25 22Z doub 24 n n C13 C14 22Z sing 25 n n C13 H13 22Z sing 26 n n C13 H13A 22Z sing 27 n n C14 C15 22Z sing 28 n y C14 C18 22Z doub 29 n y C15 H15 22Z sing 30 n n C16 C17 22Z doub 31 n y C16 H16 22Z sing 32 n n C17 C18 22Z sing 33 n y C17 H17 22Z sing 34 n n C18 H18 22Z sing 35 n n C19 C20 22Z sing 36 n n C19 H19 22Z sing 37 n n C19 H19A 22Z sing 38 n n C20 C21 22Z sing 39 n n C20 H20 22Z sing 40 n n C20 H20A 22Z sing 41 n n C21 C22 22Z sing 42 n n C21 H21 22Z sing 43 n n C21 H21A 22Z sing 44 n n C22 C23 22Z sing 45 n n C22 H22 22Z sing 46 n n C22 H22A 22Z sing 47 n n C23 C24 22Z sing 48 n n C23 H23 22Z sing 49 n n C23 H23A 22Z sing 50 n n C24 H24 22Z sing 51 n n C24 H24A 22Z sing 52 n n C24 H24B 22Z sing 53 n n # _atom_sites.entry_id 3ROY _atom_sites.fract_transf_matrix[1][1] 0.018646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01397 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013763 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 780 1 EDO EDO . C 3 22Z A 1 781 1 22Z 22Z . D 4 HOH A 1 299 1 HOH HOH . D 4 HOH A 2 300 2 HOH HOH . D 4 HOH A 3 301 3 HOH HOH . D 4 HOH A 4 302 4 HOH HOH . D 4 HOH A 5 303 5 HOH HOH . D 4 HOH A 6 304 6 HOH HOH . D 4 HOH A 7 305 7 HOH HOH . D 4 HOH A 8 306 8 HOH HOH . D 4 HOH A 9 307 9 HOH HOH . D 4 HOH A 10 308 10 HOH HOH . D 4 HOH A 11 309 11 HOH HOH . D 4 HOH A 12 310 12 HOH HOH . D 4 HOH A 13 311 13 HOH HOH . D 4 HOH A 14 312 14 HOH HOH . D 4 HOH A 15 313 15 HOH HOH . D 4 HOH A 16 314 16 HOH HOH . D 4 HOH A 17 315 17 HOH HOH . D 4 HOH A 18 316 18 HOH HOH . D 4 HOH A 19 317 19 HOH HOH . D 4 HOH A 20 318 20 HOH HOH . D 4 HOH A 21 319 21 HOH HOH . D 4 HOH A 22 321 23 HOH HOH . D 4 HOH A 23 322 24 HOH HOH . D 4 HOH A 24 324 26 HOH HOH . D 4 HOH A 25 325 27 HOH HOH . D 4 HOH A 26 326 28 HOH HOH . D 4 HOH A 27 327 29 HOH HOH . D 4 HOH A 28 329 31 HOH HOH . D 4 HOH A 29 330 32 HOH HOH . D 4 HOH A 30 331 33 HOH HOH . D 4 HOH A 31 333 35 HOH HOH . D 4 HOH A 32 335 37 HOH HOH . D 4 HOH A 33 336 38 HOH HOH . D 4 HOH A 34 337 39 HOH HOH . D 4 HOH A 35 338 40 HOH HOH . D 4 HOH A 36 339 41 HOH HOH . D 4 HOH A 37 340 42 HOH HOH . D 4 HOH A 38 341 43 HOH HOH . D 4 HOH A 39 342 44 HOH HOH . D 4 HOH A 40 343 45 HOH HOH . D 4 HOH A 41 344 46 HOH HOH . D 4 HOH A 42 347 49 HOH HOH . D 4 HOH A 43 348 50 HOH HOH . D 4 HOH A 44 349 51 HOH HOH . D 4 HOH A 45 350 52 HOH HOH . D 4 HOH A 46 351 53 HOH HOH . D 4 HOH A 47 353 55 HOH HOH . D 4 HOH A 48 354 56 HOH HOH . D 4 HOH A 49 356 58 HOH HOH . D 4 HOH A 50 357 59 HOH HOH . D 4 HOH A 51 358 60 HOH HOH . D 4 HOH A 52 359 61 HOH HOH . D 4 HOH A 53 361 63 HOH HOH . D 4 HOH A 54 362 64 HOH HOH . D 4 HOH A 55 363 65 HOH HOH . D 4 HOH A 56 364 66 HOH HOH . D 4 HOH A 57 365 67 HOH HOH . D 4 HOH A 58 367 69 HOH HOH . D 4 HOH A 59 368 70 HOH HOH . D 4 HOH A 60 369 71 HOH HOH . D 4 HOH A 61 370 72 HOH HOH . D 4 HOH A 62 372 74 HOH HOH . D 4 HOH A 63 374 76 HOH HOH . D 4 HOH A 64 375 77 HOH HOH . D 4 HOH A 65 376 78 HOH HOH . D 4 HOH A 66 377 79 HOH HOH . D 4 HOH A 67 378 80 HOH HOH . D 4 HOH A 68 379 81 HOH HOH . D 4 HOH A 69 380 82 HOH HOH . D 4 HOH A 70 382 84 HOH HOH . D 4 HOH A 71 385 87 HOH HOH . D 4 HOH A 72 387 89 HOH HOH . D 4 HOH A 73 389 91 HOH HOH . D 4 HOH A 74 390 92 HOH HOH . D 4 HOH A 75 391 93 HOH HOH . D 4 HOH A 76 396 98 HOH HOH . D 4 HOH A 77 397 99 HOH HOH . D 4 HOH A 78 399 101 HOH HOH . D 4 HOH A 79 400 102 HOH HOH . D 4 HOH A 80 401 103 HOH HOH . D 4 HOH A 81 403 105 HOH HOH . D 4 HOH A 82 404 106 HOH HOH . D 4 HOH A 83 406 108 HOH HOH . D 4 HOH A 84 407 109 HOH HOH . D 4 HOH A 85 411 113 HOH HOH . D 4 HOH A 86 414 116 HOH HOH . D 4 HOH A 87 415 117 HOH HOH . D 4 HOH A 88 416 118 HOH HOH . D 4 HOH A 89 417 119 HOH HOH . D 4 HOH A 90 418 120 HOH HOH . D 4 HOH A 91 420 122 HOH HOH . D 4 HOH A 92 421 123 HOH HOH . D 4 HOH A 93 426 128 HOH HOH . D 4 HOH A 94 433 135 HOH HOH . D 4 HOH A 95 434 136 HOH HOH . D 4 HOH A 96 443 145 HOH HOH . D 4 HOH A 97 445 147 HOH HOH . D 4 HOH A 98 448 150 HOH HOH . D 4 HOH A 99 455 157 HOH HOH . D 4 HOH A 100 457 159 HOH HOH . D 4 HOH A 101 458 160 HOH HOH . D 4 HOH A 102 459 161 HOH HOH . D 4 HOH A 103 461 163 HOH HOH . D 4 HOH A 104 470 172 HOH HOH . D 4 HOH A 105 471 173 HOH HOH . D 4 HOH A 106 472 174 HOH HOH . D 4 HOH A 107 473 175 HOH HOH . D 4 HOH A 108 475 177 HOH HOH . D 4 HOH A 109 477 179 HOH HOH . D 4 HOH A 110 479 181 HOH HOH . D 4 HOH A 111 482 184 HOH HOH . D 4 HOH A 112 484 186 HOH HOH . D 4 HOH A 113 485 187 HOH HOH . D 4 HOH A 114 490 192 HOH HOH . D 4 HOH A 115 493 195 HOH HOH . D 4 HOH A 116 495 197 HOH HOH . D 4 HOH A 117 496 198 HOH HOH . D 4 HOH A 118 499 201 HOH HOH . D 4 HOH A 119 503 205 HOH HOH . D 4 HOH A 120 504 206 HOH HOH . D 4 HOH A 121 506 208 HOH HOH . D 4 HOH A 122 508 210 HOH HOH . D 4 HOH A 123 509 211 HOH HOH . D 4 HOH A 124 512 214 HOH HOH . D 4 HOH A 125 513 215 HOH HOH . D 4 HOH A 126 516 218 HOH HOH . D 4 HOH A 127 519 221 HOH HOH . D 4 HOH A 128 521 223 HOH HOH . D 4 HOH A 129 522 224 HOH HOH . D 4 HOH A 130 525 227 HOH HOH . D 4 HOH A 131 527 229 HOH HOH . D 4 HOH A 132 530 232 HOH HOH . D 4 HOH A 133 536 238 HOH HOH . D 4 HOH A 134 537 239 HOH HOH . D 4 HOH A 135 540 242 HOH HOH . D 4 HOH A 136 543 245 HOH HOH . D 4 HOH A 137 545 247 HOH HOH . D 4 HOH A 138 546 248 HOH HOH . D 4 HOH A 139 547 249 HOH HOH . D 4 HOH A 140 548 250 HOH HOH . D 4 HOH A 141 555 257 HOH HOH . D 4 HOH A 142 557 259 HOH HOH . D 4 HOH A 143 570 272 HOH HOH . D 4 HOH A 144 571 273 HOH HOH . D 4 HOH A 145 572 274 HOH HOH . D 4 HOH A 146 575 277 HOH HOH . D 4 HOH A 147 580 282 HOH HOH . D 4 HOH A 148 583 285 HOH HOH . D 4 HOH A 149 587 289 HOH HOH . D 4 HOH A 150 592 294 HOH HOH . D 4 HOH A 151 594 296 HOH HOH . D 4 HOH A 152 595 297 HOH HOH . D 4 HOH A 153 598 300 HOH HOH . D 4 HOH A 154 615 317 HOH HOH . D 4 HOH A 155 620 322 HOH HOH . D 4 HOH A 156 624 326 HOH HOH . D 4 HOH A 157 626 328 HOH HOH . D 4 HOH A 158 627 329 HOH HOH . D 4 HOH A 159 628 330 HOH HOH . D 4 HOH A 160 631 333 HOH HOH . D 4 HOH A 161 638 340 HOH HOH . D 4 HOH A 162 656 358 HOH HOH . D 4 HOH A 163 657 359 HOH HOH . D 4 HOH A 164 660 362 HOH HOH . D 4 HOH A 165 662 364 HOH HOH . D 4 HOH A 166 665 367 HOH HOH . D 4 HOH A 167 671 373 HOH HOH . D 4 HOH A 168 673 375 HOH HOH . D 4 HOH A 169 677 379 HOH HOH . D 4 HOH A 170 679 381 HOH HOH . D 4 HOH A 171 682 384 HOH HOH . D 4 HOH A 172 686 388 HOH HOH . D 4 HOH A 173 690 392 HOH HOH . D 4 HOH A 174 698 400 HOH HOH . D 4 HOH A 175 701 403 HOH HOH . D 4 HOH A 176 702 404 HOH HOH . D 4 HOH A 177 709 411 HOH HOH . D 4 HOH A 178 710 412 HOH HOH . D 4 HOH A 179 714 416 HOH HOH . D 4 HOH A 180 717 419 HOH HOH . D 4 HOH A 181 718 420 HOH HOH . D 4 HOH A 182 728 430 HOH HOH . D 4 HOH A 183 735 437 HOH HOH . D 4 HOH A 184 748 450 HOH HOH . D 4 HOH A 185 752 454 HOH HOH . D 4 HOH A 186 753 455 HOH HOH . D 4 HOH A 187 754 456 HOH HOH . D 4 HOH A 188 755 457 HOH HOH . D 4 HOH A 189 756 458 HOH HOH . D 4 HOH A 190 757 459 HOH HOH . D 4 HOH A 191 758 460 HOH HOH . D 4 HOH A 192 760 462 HOH HOH . D 4 HOH A 193 761 463 HOH HOH . D 4 HOH A 194 762 464 HOH HOH . D 4 HOH A 195 763 465 HOH HOH . D 4 HOH A 196 764 466 HOH HOH . D 4 HOH A 197 765 467 HOH HOH . D 4 HOH A 198 766 468 HOH HOH . D 4 HOH A 199 767 469 HOH HOH . D 4 HOH A 200 768 470 HOH HOH . D 4 HOH A 201 769 471 HOH HOH . D 4 HOH A 202 770 472 HOH HOH . D 4 HOH A 203 772 474 HOH HOH . D 4 HOH A 204 773 475 HOH HOH . D 4 HOH A 205 775 477 HOH HOH . D 4 HOH A 206 777 479 HOH HOH . D 4 HOH A 207 778 480 HOH HOH . D 4 HOH A 208 779 481 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 22Z . . . C 3 -64.262 -10.178 24.066 1 27.03 ? N01 22Z 781 A 1 HETATM 2 N N02 22Z . . . C 3 -66.939 -9.837 20.952 1 21.46 ? N02 22Z 781 A 1 HETATM 3 N N03 22Z . . . C 3 -62.695 -13.29 26.553 1 30.82 ? N03 22Z 781 A 1 HETATM 4 N N04 22Z . . . C 3 -67.363 -8.071 26.978 1 35.49 ? N04 22Z 781 A 1 HETATM 5 N N05 22Z . . . C 3 -69.277 -8.172 25.004 1 34.38 ? N05 22Z 781 A 1 HETATM 6 C C06 22Z . . . C 3 -67.771 -9.218 23.553 1 30.34 ? C06 22Z 781 A 1 HETATM 7 C C07 22Z . . . C 3 -66.473 -9.747 23.286 1 27.06 ? C07 22Z 781 A 1 HETATM 8 C C08 22Z . . . C 3 -65.454 -9.695 24.31 1 28.46 ? C08 22Z 781 A 1 HETATM 9 C C09 22Z . . . C 3 -65.787 -9.108 25.588 1 31 ? C09 22Z 781 A 1 HETATM 10 C C10 22Z . . . C 3 -67.095 -8.586 25.837 1 32.74 ? C10 22Z 781 A 1 HETATM 11 C C11 22Z . . . C 3 -68.097 -8.639 24.811 1 32.58 ? C11 22Z 781 A 1 HETATM 12 C C12 22Z . . . C 3 -66.235 -10.293 22.039 1 25.54 ? C12 22Z 781 A 1 HETATM 13 C C13 22Z . . . C 3 -63.04 -9.874 24.861 1 28.96 ? C13 22Z 781 A 1 HETATM 14 C C14 22Z . . . C 3 -62.833 -10.924 25.92 1 29.65 ? C14 22Z 781 A 1 HETATM 15 C C15 22Z . . . C 3 -62.874 -12.301 25.61 1 29.47 ? C15 22Z 781 A 1 HETATM 16 C C16 22Z . . . C 3 -62.465 -12.899 27.858 1 31.28 ? C16 22Z 781 A 1 HETATM 17 C C17 22Z . . . C 3 -62.407 -11.551 28.262 1 31.4 ? C17 22Z 781 A 1 HETATM 18 C C18 22Z . . . C 3 -62.596 -10.554 27.272 1 31.09 ? C18 22Z 781 A 1 HETATM 19 C C19 22Z . . . C 3 -67.84 -8.912 28.091 1 37.11 ? C19 22Z 781 A 1 HETATM 20 C C20 22Z . . . C 3 -67.139 -8.493 29.388 1 40.63 ? C20 22Z 781 A 1 HETATM 21 C C21 22Z . . . C 3 -65.687 -8.978 29.374 1 41.61 ? C21 22Z 781 A 1 HETATM 22 C C22 22Z . . . C 3 -64.942 -8.401 30.568 1 42.32 ? C22 22Z 781 A 1 HETATM 23 C C23 22Z . . . C 3 -63.811 -9.342 30.971 1 42.84 ? C23 22Z 781 A 1 HETATM 24 C C24 22Z . . . C 3 -63.638 -9.304 32.486 1 43.2 ? C24 22Z 781 A 1 HETATM 25 O O25 22Z . . . C 3 -65.419 -11.176 21.887 1 21.12 ? O25 22Z 781 A 1 HETATM 26 O O26 22Z . . . C 3 -69.457 -7.097 25.748 1 37.16 ? O26 22Z 781 A 1 HETATM 27 O O27 22Z . . . C 3 -70.33 -8.734 24.441 1 35.15 ? O27 22Z 781 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #