data_3RQ5 # _model_server_result.job_id mbBKQxU1wwRp2yYlLZuyrg _model_server_result.datetime_utc '2024-10-19 03:35:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rq5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":277}' # _entry.id 3RQ5 # _exptl.entry_id 3RQ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RQ5 _cell.length_a 91.765 _cell.length_b 91.765 _cell.length_c 169.498 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RQ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_445 -x-1,-y-1,z -1 0 0 0 -1 0 0 0 1 -91.765 -91.765 0 3 'crystal symmetry operation' 3_455 -y-1,x,z 0 -1 0 1 0 0 0 0 1 -91.765 0 0 4 'crystal symmetry operation' 4_545 y,-x-1,z 0 1 0 -1 0 0 0 0 1 0 -91.765 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 3RQ5 _atom_sites.fract_transf_matrix[1][1] 0.010897 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010897 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0059 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 277 1 COA COA . C 3 GOL A 1 278 2 GOL GOL . D 3 GOL A 1 279 3 GOL GOL . E 4 HOH A 1 280 1 HOH HOH . E 4 HOH A 2 281 2 HOH HOH . E 4 HOH A 3 282 3 HOH HOH . E 4 HOH A 4 283 4 HOH HOH . E 4 HOH A 5 284 5 HOH HOH . E 4 HOH A 6 285 6 HOH HOH . E 4 HOH A 7 286 7 HOH HOH . E 4 HOH A 8 287 8 HOH HOH . E 4 HOH A 9 288 9 HOH HOH . E 4 HOH A 10 289 10 HOH HOH . E 4 HOH A 11 290 11 HOH HOH . E 4 HOH A 12 291 12 HOH HOH . E 4 HOH A 13 292 13 HOH HOH . E 4 HOH A 14 293 14 HOH HOH . E 4 HOH A 15 294 15 HOH HOH . E 4 HOH A 16 295 16 HOH HOH . E 4 HOH A 17 296 17 HOH HOH . E 4 HOH A 18 297 18 HOH HOH . E 4 HOH A 19 298 19 HOH HOH . E 4 HOH A 20 299 20 HOH HOH . E 4 HOH A 21 300 21 HOH HOH . E 4 HOH A 22 301 22 HOH HOH . E 4 HOH A 23 302 23 HOH HOH . E 4 HOH A 24 303 24 HOH HOH . E 4 HOH A 25 304 25 HOH HOH . E 4 HOH A 26 305 26 HOH HOH . E 4 HOH A 27 306 27 HOH HOH . E 4 HOH A 28 307 28 HOH HOH . E 4 HOH A 29 308 29 HOH HOH . E 4 HOH A 30 309 30 HOH HOH . E 4 HOH A 31 310 31 HOH HOH . E 4 HOH A 32 311 32 HOH HOH . E 4 HOH A 33 312 33 HOH HOH . E 4 HOH A 34 313 34 HOH HOH . E 4 HOH A 35 314 35 HOH HOH . E 4 HOH A 36 315 36 HOH HOH . E 4 HOH A 37 316 37 HOH HOH . E 4 HOH A 38 317 38 HOH HOH . E 4 HOH A 39 318 39 HOH HOH . E 4 HOH A 40 319 40 HOH HOH . E 4 HOH A 41 320 41 HOH HOH . E 4 HOH A 42 321 42 HOH HOH . E 4 HOH A 43 322 43 HOH HOH . E 4 HOH A 44 323 44 HOH HOH . E 4 HOH A 45 324 45 HOH HOH . E 4 HOH A 46 325 46 HOH HOH . E 4 HOH A 47 326 47 HOH HOH . E 4 HOH A 48 327 48 HOH HOH . E 4 HOH A 49 328 49 HOH HOH . E 4 HOH A 50 329 50 HOH HOH . E 4 HOH A 51 330 51 HOH HOH . E 4 HOH A 52 331 52 HOH HOH . E 4 HOH A 53 332 53 HOH HOH . E 4 HOH A 54 333 54 HOH HOH . E 4 HOH A 55 334 55 HOH HOH . E 4 HOH A 56 335 56 HOH HOH . E 4 HOH A 57 336 57 HOH HOH . E 4 HOH A 58 337 58 HOH HOH . E 4 HOH A 59 338 59 HOH HOH . E 4 HOH A 60 339 60 HOH HOH . E 4 HOH A 61 340 61 HOH HOH . E 4 HOH A 62 341 62 HOH HOH . E 4 HOH A 63 342 63 HOH HOH . E 4 HOH A 64 343 64 HOH HOH . E 4 HOH A 65 344 65 HOH HOH . E 4 HOH A 66 345 66 HOH HOH . E 4 HOH A 67 346 67 HOH HOH . E 4 HOH A 68 347 68 HOH HOH . E 4 HOH A 69 348 69 HOH HOH . E 4 HOH A 70 349 70 HOH HOH . E 4 HOH A 71 350 71 HOH HOH . E 4 HOH A 72 351 72 HOH HOH . E 4 HOH A 73 352 73 HOH HOH . E 4 HOH A 74 353 74 HOH HOH . E 4 HOH A 75 354 75 HOH HOH . E 4 HOH A 76 355 76 HOH HOH . E 4 HOH A 77 356 77 HOH HOH . E 4 HOH A 78 357 78 HOH HOH . E 4 HOH A 79 358 79 HOH HOH . E 4 HOH A 80 359 80 HOH HOH . E 4 HOH A 81 360 81 HOH HOH . E 4 HOH A 82 361 82 HOH HOH . E 4 HOH A 83 362 83 HOH HOH . E 4 HOH A 84 363 84 HOH HOH . E 4 HOH A 85 364 85 HOH HOH . E 4 HOH A 86 365 86 HOH HOH . E 4 HOH A 87 366 87 HOH HOH . E 4 HOH A 88 367 88 HOH HOH . E 4 HOH A 89 368 89 HOH HOH . E 4 HOH A 90 369 90 HOH HOH . E 4 HOH A 91 370 91 HOH HOH . E 4 HOH A 92 371 92 HOH HOH . E 4 HOH A 93 372 93 HOH HOH . E 4 HOH A 94 373 94 HOH HOH . E 4 HOH A 95 374 95 HOH HOH . E 4 HOH A 96 375 96 HOH HOH . E 4 HOH A 97 376 97 HOH HOH . E 4 HOH A 98 377 98 HOH HOH . E 4 HOH A 99 378 99 HOH HOH . E 4 HOH A 100 379 100 HOH HOH . E 4 HOH A 101 380 101 HOH HOH . E 4 HOH A 102 381 102 HOH HOH . E 4 HOH A 103 382 103 HOH HOH . E 4 HOH A 104 383 104 HOH HOH . E 4 HOH A 105 384 105 HOH HOH . E 4 HOH A 106 385 106 HOH HOH . E 4 HOH A 107 386 107 HOH HOH . E 4 HOH A 108 387 108 HOH HOH . E 4 HOH A 109 388 109 HOH HOH . E 4 HOH A 110 389 110 HOH HOH . E 4 HOH A 111 390 111 HOH HOH . E 4 HOH A 112 391 112 HOH HOH . E 4 HOH A 113 392 113 HOH HOH . E 4 HOH A 114 393 114 HOH HOH . E 4 HOH A 115 394 115 HOH HOH . E 4 HOH A 116 395 116 HOH HOH . E 4 HOH A 117 396 117 HOH HOH . E 4 HOH A 118 397 118 HOH HOH . E 4 HOH A 119 398 119 HOH HOH . E 4 HOH A 120 399 120 HOH HOH . E 4 HOH A 121 400 121 HOH HOH . E 4 HOH A 122 401 122 HOH HOH . E 4 HOH A 123 402 123 HOH HOH . E 4 HOH A 124 403 124 HOH HOH . E 4 HOH A 125 404 125 HOH HOH . E 4 HOH A 126 405 126 HOH HOH . E 4 HOH A 127 406 127 HOH HOH . E 4 HOH A 128 407 128 HOH HOH . E 4 HOH A 129 408 129 HOH HOH . E 4 HOH A 130 409 130 HOH HOH . E 4 HOH A 131 410 131 HOH HOH . E 4 HOH A 132 411 132 HOH HOH . E 4 HOH A 133 412 133 HOH HOH . E 4 HOH A 134 413 134 HOH HOH . E 4 HOH A 135 414 135 HOH HOH . E 4 HOH A 136 415 136 HOH HOH . E 4 HOH A 137 416 137 HOH HOH . E 4 HOH A 138 417 138 HOH HOH . E 4 HOH A 139 418 139 HOH HOH . E 4 HOH A 140 419 140 HOH HOH . E 4 HOH A 141 420 141 HOH HOH . E 4 HOH A 142 421 142 HOH HOH . E 4 HOH A 143 422 143 HOH HOH . E 4 HOH A 144 423 144 HOH HOH . E 4 HOH A 145 424 145 HOH HOH . E 4 HOH A 146 425 146 HOH HOH . E 4 HOH A 147 426 147 HOH HOH . E 4 HOH A 148 427 148 HOH HOH . E 4 HOH A 149 428 149 HOH HOH . E 4 HOH A 150 429 150 HOH HOH . E 4 HOH A 151 430 151 HOH HOH . E 4 HOH A 152 431 152 HOH HOH . E 4 HOH A 153 432 153 HOH HOH . E 4 HOH A 154 433 154 HOH HOH . E 4 HOH A 155 434 155 HOH HOH . E 4 HOH A 156 435 156 HOH HOH . E 4 HOH A 157 436 157 HOH HOH . E 4 HOH A 158 437 158 HOH HOH . E 4 HOH A 159 438 159 HOH HOH . E 4 HOH A 160 439 160 HOH HOH . E 4 HOH A 161 440 161 HOH HOH . E 4 HOH A 162 441 162 HOH HOH . E 4 HOH A 163 442 163 HOH HOH . E 4 HOH A 164 443 164 HOH HOH . E 4 HOH A 165 444 165 HOH HOH . E 4 HOH A 166 445 166 HOH HOH . E 4 HOH A 167 446 167 HOH HOH . E 4 HOH A 168 447 168 HOH HOH . E 4 HOH A 169 448 169 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . B 2 -63.786 -26.833 -24.277 1 42.29 ? N1A COA 277 A 1 HETATM 2 C C2A COA . . . B 2 -62.49 -26.772 -24.787 1 42.68 ? C2A COA 277 A 1 HETATM 3 N N3A COA . . . B 2 -61.403 -26.675 -23.928 1 40.35 ? N3A COA 277 A 1 HETATM 4 C C4A COA . . . B 2 -61.633 -26.61 -22.576 1 43.11 ? C4A COA 277 A 1 HETATM 5 C C5A COA . . . B 2 -62.932 -26.667 -22.059 1 41.81 ? C5A COA 277 A 1 HETATM 6 C C6A COA . . . B 2 -64.026 -26.801 -22.91 1 43.25 ? C6A COA 277 A 1 HETATM 7 N N6A COA . . . B 2 -65.11 -27.433 -22.409 1 41.42 ? N6A COA 277 A 1 HETATM 8 N N7A COA . . . B 2 -62.854 -26.604 -20.703 1 40.82 ? N7A COA 277 A 1 HETATM 9 C C8A COA . . . B 2 -61.562 -26.503 -20.331 1 40.86 ? C8A COA 277 A 1 HETATM 10 N N9A COA . . . B 2 -60.8 -26.503 -21.48 1 41.6 ? N9A COA 277 A 1 HETATM 11 C C1B COA . . . B 2 -59.34 -26.688 -21.494 1 42.22 ? C1B COA 277 A 1 HETATM 12 C C2B COA . . . B 2 -58.633 -25.374 -21.155 1 42.06 ? C2B COA 277 A 1 HETATM 13 O O2B COA . . . B 2 -58.388 -24.6 -22.303 1 43.43 ? O2B COA 277 A 1 HETATM 14 C C3B COA . . . B 2 -57.371 -25.919 -20.521 1 42.19 ? C3B COA 277 A 1 HETATM 15 O O3B COA . . . B 2 -56.467 -26.299 -21.55 1 37.31 ? O3B COA 277 A 1 HETATM 16 P P3B COA . . . B 2 -54.913 -25.916 -21.372 1 32.05 ? P3B COA 277 A 1 HETATM 17 O O7A COA . . . B 2 -54.626 -26.165 -19.871 1 33.57 ? O7A COA 277 A 1 HETATM 18 O O8A COA . . . B 2 -54.048 -26.907 -22.068 1 26.47 ? O8A COA 277 A 1 HETATM 19 O O9A COA . . . B 2 -54.739 -24.405 -21.639 1 27.57 ? O9A COA 277 A 1 HETATM 20 C C4B COA . . . B 2 -57.778 -27.2 -19.798 1 43.63 ? C4B COA 277 A 1 HETATM 21 O O4B COA . . . B 2 -58.967 -27.617 -20.472 1 43.33 ? O4B COA 277 A 1 HETATM 22 C C5B COA . . . B 2 -57.981 -27.04 -18.286 1 47.37 ? C5B COA 277 A 1 HETATM 23 O O5B COA . . . B 2 -59.028 -26.128 -18.068 1 49.7 ? O5B COA 277 A 1 HETATM 24 P P1A COA . . . B 2 -59.849 -26.03 -16.685 1 53.57 ? P1A COA 277 A 1 HETATM 25 O O1A COA . . . B 2 -59.663 -27.26 -15.806 1 54.34 ? O1A COA 277 A 1 HETATM 26 O O2A COA . . . B 2 -61.315 -25.752 -16.971 1 54.13 ? O2A COA 277 A 1 HETATM 27 O O3A COA . . . B 2 -59.167 -24.796 -15.893 1 56.23 ? O3A COA 277 A 1 HETATM 28 P P2A COA . . . B 2 -58.111 -23.756 -16.53 1 57.62 ? P2A COA 277 A 1 HETATM 29 O O4A COA . . . B 2 -57.695 -22.934 -15.205 1 57.92 ? O4A COA 277 A 1 HETATM 30 O O5A COA . . . B 2 -58.826 -22.843 -17.518 1 57.07 ? O5A COA 277 A 1 HETATM 31 O O6A COA . . . B 2 -56.897 -24.403 -17.165 1 56.99 ? O6A COA 277 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #