data_3RQW
#
_model_server_result.job_id            RPRPiWKpQ5sVmyXlIfAGPA 
_model_server_result.datetime_utc      '2024-11-17 03:35:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rqw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"XA","auth_seq_id":326}' 
#
_entry.id    3RQW 
#
_exptl.entry_id    3RQW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    27 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.82 
_cell.angle_gamma         90 
_cell.entry_id            3RQW 
_cell.length_a            105.763 
_cell.length_b            266.068 
_cell.length_c            111.162 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RQW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA pentameric 5 author_and_software_defined_assembly 1 
PISA pentameric 5 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,EB,FB,GB,HB,IB 1 1 
F,G,H,I,J,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,JB,KB,LB,MB,NB 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 M N N 
? 4 N N N 
? 4 Q N N 
? 4 R N N 
? 4 S N N 
? 4 U N N 
? 4 V N N 
? 4 Z N N 
? 4 AA N N 
? 4 DA N N 
? 4 EA N N 
? 4 HA N N 
? 4 IA N N 
? 4 JA N N 
? 4 KA N N 
? 4 NA N N 
? 4 OA N N 
? 4 PA N N 
? 4 QA N N 
? 4 SA N N 
? 4 TA N N 
? 4 WA N N 
? 4 XA N N 
? 4 YA N N 
? 4 ZA N N 
? 4 AB N N 
? 4 DB N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 154 n n 
C1 C2 GOL sing 155 n n 
C1 H11 GOL sing 156 n n 
C1 H12 GOL sing 157 n n 
O1 HO1 GOL sing 158 n n 
C2 O2 GOL sing 159 n n 
C2 C3 GOL sing 160 n n 
C2 H2 GOL sing 161 n n 
O2 HO2 GOL sing 162 n n 
C3 O3 GOL sing 163 n n 
C3 H31 GOL sing 164 n n 
C3 H32 GOL sing 165 n n 
O3 HO3 GOL sing 166 n n 
#
_atom_sites.entry_id                     3RQW 
_atom_sites.fract_transf_matrix[1][1]    0.009455 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003039 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003758 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009449 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 2 ACH A 1 323 1 ACH ACH . 
L 3 MES A 1 324 8 MES MES . 
M 4 GOL A 1 325 5 GOL GOL . 
N 4 GOL A 1 326 21 GOL GOL . 
O 2 ACH B 1 323 1 ACH ACH . 
P 3 MES B 1 324 9 MES MES . 
Q 4 GOL B 1 325 4 GOL GOL . 
R 4 GOL B 1 326 22 GOL GOL . 
S 4 GOL B 1 327 23 GOL GOL . 
T 2 ACH C 1 323 1 ACH ACH . 
U 4 GOL C 1 324 3 GOL GOL . 
V 4 GOL C 1 325 24 GOL GOL . 
W 2 ACH D 1 323 1 ACH ACH . 
X 3 MES D 1 324 5 MES MES . 
Y 3 MES D 1 325 6 MES MES . 
Z 4 GOL D 1 326 2 GOL GOL . 
AA 4 GOL D 1 327 25 GOL GOL . 
BA 2 ACH E 1 323 1 ACH ACH . 
CA 3 MES E 1 324 7 MES MES . 
DA 4 GOL E 1 325 6 GOL GOL . 
EA 4 GOL E 1 326 26 GOL GOL . 
FA 2 ACH F 1 323 1 ACH ACH . 
GA 3 MES F 1 324 3 MES MES . 
HA 4 GOL F 1 325 7 GOL GOL . 
IA 4 GOL F 1 326 8 GOL GOL . 
JA 4 GOL F 1 327 9 GOL GOL . 
KA 4 GOL F 1 328 16 GOL GOL . 
LA 2 ACH G 1 323 1 ACH ACH . 
MA 3 MES G 1 324 4 MES MES . 
NA 4 GOL G 1 325 12 GOL GOL . 
OA 4 GOL G 1 326 13 GOL GOL . 
PA 4 GOL G 1 327 15 GOL GOL . 
QA 4 GOL G 1 328 17 GOL GOL . 
RA 2 ACH H 1 323 1 ACH ACH . 
SA 4 GOL H 1 324 18 GOL GOL . 
TA 4 GOL H 1 325 27 GOL GOL . 
UA 2 ACH I 1 323 1 ACH ACH . 
VA 3 MES I 1 324 1 MES MES . 
WA 4 GOL I 1 325 1 GOL GOL . 
XA 4 GOL I 1 326 10 GOL GOL . 
YA 4 GOL I 1 327 11 GOL GOL . 
ZA 4 GOL I 1 328 14 GOL GOL . 
AB 4 GOL I 1 329 19 GOL GOL . 
BB 2 ACH J 1 323 1 ACH ACH . 
CB 3 MES J 1 324 2 MES MES . 
DB 4 GOL J 1 325 20 GOL GOL . 
EB 5 HOH A 1 327 4 HOH HOH . 
EB 5 HOH A 2 328 10 HOH HOH . 
EB 5 HOH A 3 329 32 HOH HOH . 
EB 5 HOH A 4 330 39 HOH HOH . 
EB 5 HOH A 5 331 42 HOH HOH . 
EB 5 HOH A 6 332 43 HOH HOH . 
EB 5 HOH A 7 333 62 HOH HOH . 
EB 5 HOH A 8 334 67 HOH HOH . 
EB 5 HOH A 9 335 69 HOH HOH . 
EB 5 HOH A 10 336 80 HOH HOH . 
FB 5 HOH B 1 328 7 HOH HOH . 
FB 5 HOH B 2 329 16 HOH HOH . 
FB 5 HOH B 3 330 34 HOH HOH . 
FB 5 HOH B 4 331 41 HOH HOH . 
FB 5 HOH B 5 332 63 HOH HOH . 
FB 5 HOH B 6 333 79 HOH HOH . 
FB 5 HOH B 7 334 81 HOH HOH . 
FB 5 HOH B 8 335 88 HOH HOH . 
GB 5 HOH C 1 326 2 HOH HOH . 
GB 5 HOH C 2 327 13 HOH HOH . 
GB 5 HOH C 3 328 33 HOH HOH . 
GB 5 HOH C 4 329 47 HOH HOH . 
GB 5 HOH C 5 330 50 HOH HOH . 
GB 5 HOH C 6 331 51 HOH HOH . 
GB 5 HOH C 7 332 59 HOH HOH . 
GB 5 HOH C 8 333 64 HOH HOH . 
GB 5 HOH C 9 334 78 HOH HOH . 
GB 5 HOH C 10 335 90 HOH HOH . 
HB 5 HOH D 1 328 3 HOH HOH . 
HB 5 HOH D 2 329 6 HOH HOH . 
HB 5 HOH D 3 330 8 HOH HOH . 
HB 5 HOH D 4 331 12 HOH HOH . 
HB 5 HOH D 5 332 35 HOH HOH . 
HB 5 HOH D 6 333 36 HOH HOH . 
HB 5 HOH D 7 334 44 HOH HOH . 
HB 5 HOH D 8 335 46 HOH HOH . 
HB 5 HOH D 9 336 49 HOH HOH . 
HB 5 HOH D 10 337 52 HOH HOH . 
HB 5 HOH D 11 338 56 HOH HOH . 
HB 5 HOH D 12 339 57 HOH HOH . 
HB 5 HOH D 13 340 58 HOH HOH . 
HB 5 HOH D 14 341 70 HOH HOH . 
HB 5 HOH D 15 342 77 HOH HOH . 
IB 5 HOH E 1 327 37 HOH HOH . 
IB 5 HOH E 2 328 38 HOH HOH . 
IB 5 HOH E 3 329 45 HOH HOH . 
IB 5 HOH E 4 330 48 HOH HOH . 
IB 5 HOH E 5 331 53 HOH HOH . 
IB 5 HOH E 6 332 60 HOH HOH . 
IB 5 HOH E 7 333 61 HOH HOH . 
IB 5 HOH E 8 334 65 HOH HOH . 
IB 5 HOH E 9 335 66 HOH HOH . 
IB 5 HOH E 10 336 71 HOH HOH . 
IB 5 HOH E 11 337 85 HOH HOH . 
JB 5 HOH F 1 329 11 HOH HOH . 
JB 5 HOH F 2 330 14 HOH HOH . 
JB 5 HOH F 3 331 72 HOH HOH . 
JB 5 HOH F 4 332 89 HOH HOH . 
KB 5 HOH G 1 329 1 HOH HOH . 
KB 5 HOH G 2 330 17 HOH HOH . 
KB 5 HOH G 3 331 19 HOH HOH . 
KB 5 HOH G 4 332 21 HOH HOH . 
KB 5 HOH G 5 333 26 HOH HOH . 
KB 5 HOH G 6 334 27 HOH HOH . 
KB 5 HOH G 7 335 28 HOH HOH . 
KB 5 HOH G 8 336 30 HOH HOH . 
KB 5 HOH G 9 337 55 HOH HOH . 
KB 5 HOH G 10 338 73 HOH HOH . 
KB 5 HOH G 11 339 76 HOH HOH . 
KB 5 HOH G 12 340 83 HOH HOH . 
LB 5 HOH H 1 326 5 HOH HOH . 
LB 5 HOH H 2 327 18 HOH HOH . 
LB 5 HOH H 3 328 20 HOH HOH . 
LB 5 HOH H 4 329 22 HOH HOH . 
LB 5 HOH H 5 330 40 HOH HOH . 
LB 5 HOH H 6 331 68 HOH HOH . 
LB 5 HOH H 7 332 86 HOH HOH . 
MB 5 HOH I 1 330 15 HOH HOH . 
MB 5 HOH I 2 331 23 HOH HOH . 
MB 5 HOH I 3 332 24 HOH HOH . 
MB 5 HOH I 4 333 31 HOH HOH . 
MB 5 HOH I 5 334 74 HOH HOH . 
MB 5 HOH I 6 335 87 HOH HOH . 
NB 5 HOH J 1 326 9 HOH HOH . 
NB 5 HOH J 2 327 25 HOH HOH . 
NB 5 HOH J 3 328 29 HOH HOH . 
NB 5 HOH J 4 329 54 HOH HOH . 
NB 5 HOH J 5 330 75 HOH HOH . 
NB 5 HOH J 6 331 82 HOH HOH . 
NB 5 HOH J 7 332 84 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . XA 4 -113.045 -103.816 -45.667 1 119.44 ? C1 GOL 326 I 1 
HETATM 2 O O1 GOL . . . XA 4 -112.116 -104.374 -46.548 1 73.54 ? O1 GOL 326 I 1 
HETATM 3 C C2 GOL . . . XA 4 -112.458 -103.037 -44.515 1 114.78 ? C2 GOL 326 I 1 
HETATM 4 O O2 GOL . . . XA 4 -111.446 -102.182 -44.927 1 91.77 ? O2 GOL 326 I 1 
HETATM 5 C C3 GOL . . . XA 4 -112.083 -103.916 -43.348 1 92 ? C3 GOL 326 I 1 
HETATM 6 O O3 GOL . . . XA 4 -111.755 -103.19 -42.202 1 76.28 ? O3 GOL 326 I 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           43 
_model_server_stats.create_model_time_ms    155 
_model_server_stats.query_time_ms           529 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#