data_3RRA # _model_server_result.job_id ENIZgwv6cGGYQIpkUSSVdw _model_server_result.datetime_utc '2024-12-21 10:52:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rra # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":406}' # _entry.id 3RRA # _exptl.entry_id 3RRA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RRA _cell.length_a 117.339 _cell.length_b 117.339 _cell.length_c 113.685 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RRA _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -117.339 117.339 0 3 'crystal symmetry operation' 3_565 -y,x+1,z 0 -1 0 1 0 0 0 0 1 0 117.339 0 4 'crystal symmetry operation' 4_455 y-1,-x,z 0 1 0 -1 0 0 0 0 1 -117.339 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 287 B CYS 286 1_555 B SG CYS 297 B CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 A OD2 ASP 184 A ASP 183 1_555 D MG MG . A MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc2 A OE1 GLU 210 A GLU 209 1_555 D MG MG . A MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc3 A OE2 GLU 236 A GLU 235 1_555 D MG MG . A MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc4 D MG MG . A MG 406 1_555 G O HOH . A HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc5 D MG MG . A MG 406 1_555 G O HOH . A HOH 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc6 B OD2 ASP 184 B ASP 183 1_555 F MG MG . B MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc7 B OE1 GLU 210 B GLU 209 1_555 F MG MG . B MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc8 B OE1 GLU 236 B GLU 235 1_555 F MG MG . B MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc9 F MG MG . B MG 406 1_555 H O HOH . B HOH 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc10 F MG MG . B MG 406 1_555 H O HOH . B HOH 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3RRA _atom_sites.fract_transf_matrix[1][1] 0.008522 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008522 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008796 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 405 1 CL CL . D 3 MG A 1 406 1 MG MG . E 2 CL B 1 405 1 CL CL . F 3 MG B 1 406 1 MG MG . G 4 HOH A 1 407 4 HOH HOH . G 4 HOH A 2 408 5 HOH HOH . G 4 HOH A 3 409 7 HOH HOH . G 4 HOH A 4 410 14 HOH HOH . G 4 HOH A 5 411 15 HOH HOH . G 4 HOH A 6 412 20 HOH HOH . G 4 HOH A 7 413 22 HOH HOH . G 4 HOH A 8 414 23 HOH HOH . G 4 HOH A 9 415 26 HOH HOH . G 4 HOH A 10 416 29 HOH HOH . G 4 HOH A 11 417 32 HOH HOH . G 4 HOH A 12 418 37 HOH HOH . G 4 HOH A 13 419 39 HOH HOH . G 4 HOH A 14 420 40 HOH HOH . G 4 HOH A 15 421 43 HOH HOH . G 4 HOH A 16 422 49 HOH HOH . G 4 HOH A 17 423 60 HOH HOH . G 4 HOH A 18 424 65 HOH HOH . G 4 HOH A 19 425 88 HOH HOH . G 4 HOH A 20 426 91 HOH HOH . G 4 HOH A 21 427 113 HOH HOH . G 4 HOH A 22 428 122 HOH HOH . G 4 HOH A 23 429 128 HOH HOH . G 4 HOH A 24 430 133 HOH HOH . G 4 HOH A 25 431 139 HOH HOH . G 4 HOH A 26 432 140 HOH HOH . G 4 HOH A 27 433 153 HOH HOH . G 4 HOH A 28 434 164 HOH HOH . G 4 HOH A 29 435 169 HOH HOH . G 4 HOH A 30 436 172 HOH HOH . G 4 HOH A 31 437 176 HOH HOH . G 4 HOH A 32 438 199 HOH HOH . G 4 HOH A 33 439 209 HOH HOH . G 4 HOH A 34 440 210 HOH HOH . G 4 HOH A 35 441 212 HOH HOH . G 4 HOH A 36 442 213 HOH HOH . G 4 HOH A 37 443 214 HOH HOH . G 4 HOH A 38 444 217 HOH HOH . G 4 HOH A 39 445 218 HOH HOH . G 4 HOH A 40 446 219 HOH HOH . G 4 HOH A 41 447 220 HOH HOH . G 4 HOH A 42 448 222 HOH HOH . G 4 HOH A 43 449 223 HOH HOH . G 4 HOH A 44 450 224 HOH HOH . G 4 HOH A 45 451 226 HOH HOH . G 4 HOH A 46 452 228 HOH HOH . G 4 HOH A 47 453 229 HOH HOH . G 4 HOH A 48 454 254 HOH HOH . G 4 HOH A 49 455 268 HOH HOH . G 4 HOH A 50 456 270 HOH HOH . G 4 HOH A 51 457 271 HOH HOH . G 4 HOH A 52 458 287 HOH HOH . G 4 HOH A 53 459 292 HOH HOH . G 4 HOH A 54 460 293 HOH HOH . G 4 HOH A 55 461 294 HOH HOH . G 4 HOH A 56 462 296 HOH HOH . G 4 HOH A 57 463 297 HOH HOH . H 4 HOH B 1 407 6 HOH HOH . H 4 HOH B 2 408 8 HOH HOH . H 4 HOH B 3 409 9 HOH HOH . H 4 HOH B 4 410 12 HOH HOH . H 4 HOH B 5 411 16 HOH HOH . H 4 HOH B 6 412 17 HOH HOH . H 4 HOH B 7 413 18 HOH HOH . H 4 HOH B 8 414 19 HOH HOH . H 4 HOH B 9 415 21 HOH HOH . H 4 HOH B 10 416 25 HOH HOH . H 4 HOH B 11 417 27 HOH HOH . H 4 HOH B 12 418 30 HOH HOH . H 4 HOH B 13 419 33 HOH HOH . H 4 HOH B 14 420 34 HOH HOH . H 4 HOH B 15 421 35 HOH HOH . H 4 HOH B 16 422 38 HOH HOH . H 4 HOH B 17 423 47 HOH HOH . H 4 HOH B 18 424 48 HOH HOH . H 4 HOH B 19 425 51 HOH HOH . H 4 HOH B 20 426 54 HOH HOH . H 4 HOH B 21 427 57 HOH HOH . H 4 HOH B 22 428 58 HOH HOH . H 4 HOH B 23 429 59 HOH HOH . H 4 HOH B 24 430 62 HOH HOH . H 4 HOH B 25 431 63 HOH HOH . H 4 HOH B 26 432 69 HOH HOH . H 4 HOH B 27 433 71 HOH HOH . H 4 HOH B 28 434 72 HOH HOH . H 4 HOH B 29 435 74 HOH HOH . H 4 HOH B 30 436 75 HOH HOH . H 4 HOH B 31 437 76 HOH HOH . H 4 HOH B 32 438 78 HOH HOH . H 4 HOH B 33 439 80 HOH HOH . H 4 HOH B 34 440 89 HOH HOH . H 4 HOH B 35 441 90 HOH HOH . H 4 HOH B 36 442 98 HOH HOH . H 4 HOH B 37 443 99 HOH HOH . H 4 HOH B 38 444 109 HOH HOH . H 4 HOH B 39 445 110 HOH HOH . H 4 HOH B 40 446 111 HOH HOH . H 4 HOH B 41 447 112 HOH HOH . H 4 HOH B 42 448 118 HOH HOH . H 4 HOH B 43 449 121 HOH HOH . H 4 HOH B 44 450 132 HOH HOH . H 4 HOH B 45 451 134 HOH HOH . H 4 HOH B 46 452 137 HOH HOH . H 4 HOH B 47 453 141 HOH HOH . H 4 HOH B 48 454 149 HOH HOH . H 4 HOH B 49 455 158 HOH HOH . H 4 HOH B 50 456 167 HOH HOH . H 4 HOH B 51 457 168 HOH HOH . H 4 HOH B 52 458 171 HOH HOH . H 4 HOH B 53 459 173 HOH HOH . H 4 HOH B 54 460 181 HOH HOH . H 4 HOH B 55 461 185 HOH HOH . H 4 HOH B 56 462 190 HOH HOH . H 4 HOH B 57 463 198 HOH HOH . H 4 HOH B 58 464 201 HOH HOH . H 4 HOH B 59 465 205 HOH HOH . H 4 HOH B 60 466 207 HOH HOH . H 4 HOH B 61 467 231 HOH HOH . H 4 HOH B 62 468 234 HOH HOH . H 4 HOH B 63 469 235 HOH HOH . H 4 HOH B 64 470 245 HOH HOH . H 4 HOH B 65 471 248 HOH HOH . H 4 HOH B 66 472 250 HOH HOH . H 4 HOH B 67 473 252 HOH HOH . H 4 HOH B 68 474 258 HOH HOH . H 4 HOH B 69 475 259 HOH HOH . H 4 HOH B 70 476 261 HOH HOH . H 4 HOH B 71 477 277 HOH HOH . H 4 HOH B 72 478 279 HOH HOH . H 4 HOH B 73 479 284 HOH HOH . H 4 HOH B 74 480 285 HOH HOH . H 4 HOH B 75 481 286 HOH HOH . H 4 HOH B 76 482 289 HOH HOH . H 4 HOH B 77 483 290 HOH HOH . H 4 HOH B 78 484 291 HOH HOH . H 4 HOH B 79 485 295 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -32.375 _atom_site.Cartn_y 52.55 _atom_site.Cartn_z 19.082 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 406 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #