data_3RRO # _model_server_result.job_id n1AxyGjfeeSI7nRtaZG_pQ _model_server_result.datetime_utc '2024-12-17 07:54:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rro # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":256}' # _entry.id 3RRO # _exptl.entry_id 3RRO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3RRO _cell.length_a 63.939 _cell.length_b 63.939 _cell.length_c 190.146 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RRO _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -63.939 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N ? 4 K N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 3RRO _atom_sites.fract_transf_matrix[1][1] 0.01564 _atom_sites.fract_transf_matrix[1][2] 0.00903 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005259 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 249 8 SO4 SO4 . D 2 SO4 A 1 250 10 SO4 SO4 . E 2 SO4 A 1 251 11 SO4 SO4 . F 2 SO4 A 1 252 13 SO4 SO4 . G 2 SO4 A 1 253 18 SO4 SO4 . H 3 PGE A 1 254 1 PGE PGE . I 4 EDO A 1 255 1 EDO EDO . J 4 EDO A 1 256 1 EDO EDO . K 4 EDO A 1 257 1 EDO EDO . L 5 GOL A 1 258 1 GOL GOL . M 2 SO4 B 1 249 5 SO4 SO4 . N 2 SO4 B 1 250 7 SO4 SO4 . O 2 SO4 B 1 251 9 SO4 SO4 . P 2 SO4 B 1 252 14 SO4 SO4 . Q 2 SO4 B 1 253 15 SO4 SO4 . R 2 SO4 B 1 254 17 SO4 SO4 . S 2 SO4 B 1 255 19 SO4 SO4 . T 4 EDO B 1 256 1 EDO EDO . U 4 EDO B 1 257 1 EDO EDO . V 4 EDO B 1 258 1 EDO EDO . W 4 EDO B 1 259 1 EDO EDO . X 3 PGE B 1 260 1 PGE PGE . Y 6 CL B 1 261 1 CL CL . Z 7 HOH A 1 259 1 HOH HOH . Z 7 HOH A 2 260 2 HOH HOH . Z 7 HOH A 3 261 4 HOH HOH . Z 7 HOH A 4 262 6 HOH HOH . Z 7 HOH A 5 263 10 HOH HOH . Z 7 HOH A 6 264 11 HOH HOH . Z 7 HOH A 7 265 12 HOH HOH . Z 7 HOH A 8 266 15 HOH HOH . Z 7 HOH A 9 267 17 HOH HOH . Z 7 HOH A 10 268 18 HOH HOH . Z 7 HOH A 11 269 19 HOH HOH . Z 7 HOH A 12 270 21 HOH HOH . Z 7 HOH A 13 271 22 HOH HOH . Z 7 HOH A 14 272 23 HOH HOH . Z 7 HOH A 15 273 25 HOH HOH . Z 7 HOH A 16 274 26 HOH HOH . Z 7 HOH A 17 275 28 HOH HOH . Z 7 HOH A 18 276 31 HOH HOH . Z 7 HOH A 19 277 36 HOH HOH . Z 7 HOH A 20 278 42 HOH HOH . Z 7 HOH A 21 279 45 HOH HOH . Z 7 HOH A 22 280 46 HOH HOH . Z 7 HOH A 23 281 49 HOH HOH . Z 7 HOH A 24 283 53 HOH HOH . Z 7 HOH A 25 284 54 HOH HOH . Z 7 HOH A 26 285 56 HOH HOH . Z 7 HOH A 27 286 57 HOH HOH . Z 7 HOH A 28 287 58 HOH HOH . Z 7 HOH A 29 288 59 HOH HOH . Z 7 HOH A 30 289 61 HOH HOH . Z 7 HOH A 31 290 62 HOH HOH . Z 7 HOH A 32 291 64 HOH HOH . Z 7 HOH A 33 292 65 HOH HOH . Z 7 HOH A 34 293 66 HOH HOH . Z 7 HOH A 35 294 68 HOH HOH . Z 7 HOH A 36 295 69 HOH HOH . Z 7 HOH A 37 296 70 HOH HOH . Z 7 HOH A 38 297 71 HOH HOH . Z 7 HOH A 39 298 72 HOH HOH . Z 7 HOH A 40 299 73 HOH HOH . Z 7 HOH A 41 300 74 HOH HOH . Z 7 HOH A 42 301 75 HOH HOH . Z 7 HOH A 43 302 80 HOH HOH . Z 7 HOH A 44 303 84 HOH HOH . Z 7 HOH A 45 304 85 HOH HOH . Z 7 HOH A 46 305 86 HOH HOH . Z 7 HOH A 47 306 89 HOH HOH . Z 7 HOH A 48 307 91 HOH HOH . Z 7 HOH A 49 308 94 HOH HOH . Z 7 HOH A 50 309 95 HOH HOH . Z 7 HOH A 51 310 98 HOH HOH . Z 7 HOH A 52 311 100 HOH HOH . Z 7 HOH A 53 312 102 HOH HOH . Z 7 HOH A 54 313 103 HOH HOH . Z 7 HOH A 55 314 105 HOH HOH . Z 7 HOH A 56 315 110 HOH HOH . Z 7 HOH A 57 316 111 HOH HOH . Z 7 HOH A 58 317 113 HOH HOH . Z 7 HOH A 59 318 114 HOH HOH . Z 7 HOH A 60 319 118 HOH HOH . Z 7 HOH A 61 320 120 HOH HOH . Z 7 HOH A 62 321 123 HOH HOH . Z 7 HOH A 63 322 124 HOH HOH . Z 7 HOH A 64 323 128 HOH HOH . Z 7 HOH A 65 324 132 HOH HOH . Z 7 HOH A 66 325 135 HOH HOH . Z 7 HOH A 67 326 136 HOH HOH . Z 7 HOH A 68 327 137 HOH HOH . Z 7 HOH A 69 328 140 HOH HOH . Z 7 HOH A 70 329 142 HOH HOH . Z 7 HOH A 71 330 144 HOH HOH . Z 7 HOH A 72 331 145 HOH HOH . Z 7 HOH A 73 332 146 HOH HOH . Z 7 HOH A 74 333 147 HOH HOH . Z 7 HOH A 75 334 148 HOH HOH . Z 7 HOH A 76 335 150 HOH HOH . Z 7 HOH A 77 336 151 HOH HOH . Z 7 HOH A 78 337 152 HOH HOH . Z 7 HOH A 79 338 156 HOH HOH . Z 7 HOH A 80 339 158 HOH HOH . Z 7 HOH A 81 340 163 HOH HOH . Z 7 HOH A 82 341 164 HOH HOH . Z 7 HOH A 83 342 165 HOH HOH . Z 7 HOH A 84 343 166 HOH HOH . Z 7 HOH A 85 344 167 HOH HOH . Z 7 HOH A 86 345 168 HOH HOH . Z 7 HOH A 87 346 171 HOH HOH . Z 7 HOH A 88 348 178 HOH HOH . Z 7 HOH A 89 349 179 HOH HOH . Z 7 HOH A 90 350 181 HOH HOH . Z 7 HOH A 91 351 183 HOH HOH . Z 7 HOH A 92 352 186 HOH HOH . Z 7 HOH A 93 353 187 HOH HOH . Z 7 HOH A 94 354 196 HOH HOH . Z 7 HOH A 95 355 205 HOH HOH . Z 7 HOH A 96 356 206 HOH HOH . Z 7 HOH A 97 357 209 HOH HOH . Z 7 HOH A 98 358 215 HOH HOH . Z 7 HOH A 99 359 218 HOH HOH . Z 7 HOH A 100 360 219 HOH HOH . Z 7 HOH A 101 361 220 HOH HOH . AA 7 HOH B 1 262 3 HOH HOH . AA 7 HOH B 2 263 5 HOH HOH . AA 7 HOH B 3 264 7 HOH HOH . AA 7 HOH B 4 265 9 HOH HOH . AA 7 HOH B 5 266 14 HOH HOH . AA 7 HOH B 6 267 20 HOH HOH . AA 7 HOH B 7 268 24 HOH HOH . AA 7 HOH B 8 269 27 HOH HOH . AA 7 HOH B 9 270 29 HOH HOH . AA 7 HOH B 10 271 30 HOH HOH . AA 7 HOH B 11 272 32 HOH HOH . AA 7 HOH B 12 273 33 HOH HOH . AA 7 HOH B 13 274 34 HOH HOH . AA 7 HOH B 14 275 37 HOH HOH . AA 7 HOH B 15 276 38 HOH HOH . AA 7 HOH B 16 277 39 HOH HOH . AA 7 HOH B 17 278 40 HOH HOH . AA 7 HOH B 18 279 41 HOH HOH . AA 7 HOH B 19 280 43 HOH HOH . AA 7 HOH B 20 281 44 HOH HOH . AA 7 HOH B 21 282 52 HOH HOH . AA 7 HOH B 22 283 48 HOH HOH . AA 7 HOH B 23 284 50 HOH HOH . AA 7 HOH B 24 285 51 HOH HOH . AA 7 HOH B 25 286 55 HOH HOH . AA 7 HOH B 26 287 63 HOH HOH . AA 7 HOH B 27 288 67 HOH HOH . AA 7 HOH B 28 289 76 HOH HOH . AA 7 HOH B 29 290 78 HOH HOH . AA 7 HOH B 30 291 79 HOH HOH . AA 7 HOH B 31 292 83 HOH HOH . AA 7 HOH B 32 293 87 HOH HOH . AA 7 HOH B 33 294 88 HOH HOH . AA 7 HOH B 34 295 90 HOH HOH . AA 7 HOH B 35 296 92 HOH HOH . AA 7 HOH B 36 297 93 HOH HOH . AA 7 HOH B 37 298 96 HOH HOH . AA 7 HOH B 38 299 97 HOH HOH . AA 7 HOH B 39 300 99 HOH HOH . AA 7 HOH B 40 301 101 HOH HOH . AA 7 HOH B 41 302 104 HOH HOH . AA 7 HOH B 42 303 107 HOH HOH . AA 7 HOH B 43 304 109 HOH HOH . AA 7 HOH B 44 305 112 HOH HOH . AA 7 HOH B 45 306 115 HOH HOH . AA 7 HOH B 46 307 117 HOH HOH . AA 7 HOH B 47 308 119 HOH HOH . AA 7 HOH B 48 309 121 HOH HOH . AA 7 HOH B 49 310 122 HOH HOH . AA 7 HOH B 50 311 125 HOH HOH . AA 7 HOH B 51 312 126 HOH HOH . AA 7 HOH B 52 313 127 HOH HOH . AA 7 HOH B 53 314 131 HOH HOH . AA 7 HOH B 54 315 133 HOH HOH . AA 7 HOH B 55 316 134 HOH HOH . AA 7 HOH B 56 317 138 HOH HOH . AA 7 HOH B 57 318 139 HOH HOH . AA 7 HOH B 58 319 141 HOH HOH . AA 7 HOH B 59 320 143 HOH HOH . AA 7 HOH B 60 321 149 HOH HOH . AA 7 HOH B 61 322 153 HOH HOH . AA 7 HOH B 62 323 154 HOH HOH . AA 7 HOH B 63 324 155 HOH HOH . AA 7 HOH B 64 325 157 HOH HOH . AA 7 HOH B 65 326 160 HOH HOH . AA 7 HOH B 66 327 162 HOH HOH . AA 7 HOH B 67 328 169 HOH HOH . AA 7 HOH B 68 329 182 HOH HOH . AA 7 HOH B 69 330 185 HOH HOH . AA 7 HOH B 70 331 188 HOH HOH . AA 7 HOH B 71 332 189 HOH HOH . AA 7 HOH B 72 333 190 HOH HOH . AA 7 HOH B 73 334 191 HOH HOH . AA 7 HOH B 74 335 192 HOH HOH . AA 7 HOH B 75 336 195 HOH HOH . AA 7 HOH B 76 337 197 HOH HOH . AA 7 HOH B 77 338 198 HOH HOH . AA 7 HOH B 78 339 200 HOH HOH . AA 7 HOH B 79 340 201 HOH HOH . AA 7 HOH B 80 341 202 HOH HOH . AA 7 HOH B 81 342 207 HOH HOH . AA 7 HOH B 82 343 208 HOH HOH . AA 7 HOH B 83 344 210 HOH HOH . AA 7 HOH B 84 345 211 HOH HOH . AA 7 HOH B 85 346 212 HOH HOH . AA 7 HOH B 86 347 176 HOH HOH . AA 7 HOH B 87 348 214 HOH HOH . AA 7 HOH B 88 349 216 HOH HOH . AA 7 HOH B 89 350 217 HOH HOH . AA 7 HOH B 90 351 221 HOH HOH . AA 7 HOH B 91 352 222 HOH HOH . AA 7 HOH B 92 353 223 HOH HOH . AA 7 HOH B 93 354 224 HOH HOH . AA 7 HOH B 94 355 225 HOH HOH . AA 7 HOH B 95 356 226 HOH HOH . AA 7 HOH B 96 357 47 HOH HOH . AA 7 HOH B 97 358 213 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . J 4 -12.198 1.765 -15.759 1 36.55 ? C1 EDO 256 A 1 HETATM 2 O O1 EDO . . . J 4 -10.848 2.019 -15.335 1 35.29 ? O1 EDO 256 A 1 HETATM 3 C C2 EDO . . . J 4 -12.215 0.86 -16.982 1 36.43 ? C2 EDO 256 A 1 HETATM 4 O O2 EDO . . . J 4 -11.352 -0.289 -16.794 1 37.23 ? O2 EDO 256 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #