data_3RSL # _model_server_result.job_id uUdm1thse_FZ0XUxjUi-OA _model_server_result.datetime_utc '2024-11-02 02:25:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rsl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":212}' # _entry.id 3RSL # _exptl.entry_id 3RSL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 130.142 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-ol _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3RSL _cell.length_a 89.14 _cell.length_b 89.14 _cell.length_c 133.089 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RSL _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 P MG MG . A MG 592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc2 A O PHE 28 A PHE 28 1_555 Q CA CA . A CA 591 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc3 A OD2 ASP 30 A ASP 30 1_555 Q CA CA . A CA 591 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc4 A OG1 THR 35 A THR 35 1_555 P MG MG . A MG 592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc5 A O ARG 102 A ARG 102 1_555 S CA CA . A CA 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc6 A OD2 ASP 105 A ASP 105 1_555 S CA CA . A CA 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc7 A OD1 ASP 105 A ASP 105 1_555 S CA CA . A CA 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc8 A OE1 GLU 153 A GLU 153 1_555 R CA CA . A CA 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc9 A OD1 ASP 154 A ASP 154 1_555 R CA CA . A CA 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc10 B O2G GNP . A GNP 190 1_555 P MG MG . A MG 592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc11 B O2B GNP . A GNP 190 1_555 P MG MG . A MG 592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc12 T O HOH . A HOH 301 1_555 P MG MG . A MG 592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc13 T O HOH . A HOH 303 1_555 P MG MG . A MG 592 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc14 T O HOH . A HOH 309 1_555 Q CA CA . A CA 591 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc15 T O HOH . A HOH 321 1_555 R CA CA . A CA 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.187 ? # _chem_comp.formula 'C6 H10 O3' _chem_comp.formula_weight 130.142 _chem_comp.id RSF _chem_comp.mon_nstd_flag . _chem_comp.name (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C6 RSF sing 328 n n C5 O1 RSF sing 329 n n C6 C2 RSF sing 330 n n O1 C1 RSF sing 331 n n C4 O2 RSF sing 332 n n C4 C3 RSF sing 333 n n O2 C1 RSF sing 334 n n C1 C2 RSF sing 335 n n C2 C3 RSF sing 336 n n C3 O3 RSF sing 337 n n C5 H15 RSF sing 338 n n C5 H25 RSF sing 339 n n C6 H16 RSF sing 340 n n C6 H26 RSF sing 341 n n C4 H14 RSF sing 342 n n C4 H24 RSF sing 343 n n C1 H1 RSF sing 344 n n C2 H2 RSF sing 345 n n C3 H3 RSF sing 346 n n O3 HO3 RSF sing 347 n n # _atom_sites.entry_id 3RSL _atom_sites.fract_transf_matrix[1][1] 0.011218 _atom_sites.fract_transf_matrix[1][2] 0.006477 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012954 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007514 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GNP A 1 190 190 GNP GNP . C 3 RSF A 1 203 203 RSF RSF . D 3 RSF A 1 204 204 RSF RSF . E 3 RSF A 1 206 206 RSF RSF . F 3 RSF A 1 209 209 RSF RSF . G 3 RSF A 1 207 207 RSF RSF . H 3 RSF A 1 211 211 RSF RSF . I 3 RSF A 1 208 208 RSF RSF . J 3 RSF A 1 212 212 RSF RSF . K 3 RSF A 1 213 213 RSF RSF . L 3 RSF A 1 214 214 RSF RSF . M 3 RSF A 1 205 205 RSF RSF . N 3 RSF A 1 215 215 RSF RSF . O 3 RSF A 1 210 210 RSF RSF . P 4 MG A 1 592 592 MG MG . Q 5 CA A 1 591 591 CA CA . R 5 CA A 1 596 596 CA CA . S 5 CA A 1 593 593 CA CA . T 6 HOH A 1 301 301 HOH HOH . T 6 HOH A 2 302 302 HOH HOH . T 6 HOH A 3 303 303 HOH HOH . T 6 HOH A 4 304 304 HOH HOH . T 6 HOH A 5 305 305 HOH HOH . T 6 HOH A 6 306 306 HOH HOH . T 6 HOH A 7 307 307 HOH HOH . T 6 HOH A 8 308 308 HOH HOH . T 6 HOH A 9 309 309 HOH HOH . T 6 HOH A 10 310 310 HOH HOH . T 6 HOH A 11 311 311 HOH HOH . T 6 HOH A 12 312 312 HOH HOH . T 6 HOH A 13 313 313 HOH HOH . T 6 HOH A 14 314 314 HOH HOH . T 6 HOH A 15 315 315 HOH HOH . T 6 HOH A 16 316 316 HOH HOH . T 6 HOH A 17 317 317 HOH HOH . T 6 HOH A 18 318 318 HOH HOH . T 6 HOH A 19 319 319 HOH HOH . T 6 HOH A 20 320 320 HOH HOH . T 6 HOH A 21 321 321 HOH HOH . T 6 HOH A 22 322 322 HOH HOH . T 6 HOH A 23 323 323 HOH HOH . T 6 HOH A 24 324 324 HOH HOH . T 6 HOH A 25 325 325 HOH HOH . T 6 HOH A 26 326 326 HOH HOH . T 6 HOH A 27 333 333 HOH HOH . T 6 HOH A 28 338 338 HOH HOH . T 6 HOH A 29 342 342 HOH HOH . T 6 HOH A 30 343 343 HOH HOH . T 6 HOH A 31 344 344 HOH HOH . T 6 HOH A 32 346 346 HOH HOH . T 6 HOH A 33 383 383 HOH HOH . T 6 HOH A 34 389 389 HOH HOH . T 6 HOH A 35 391 391 HOH HOH . T 6 HOH A 36 392 392 HOH HOH . T 6 HOH A 37 394 394 HOH HOH . T 6 HOH A 38 409 409 HOH HOH . T 6 HOH A 39 422 422 HOH HOH . T 6 HOH A 40 431 431 HOH HOH . T 6 HOH A 41 438 438 HOH HOH . T 6 HOH A 42 440 440 HOH HOH . T 6 HOH A 43 472 472 HOH HOH . T 6 HOH A 44 525 525 HOH HOH . T 6 HOH A 45 526 526 HOH HOH . T 6 HOH A 46 527 527 HOH HOH . T 6 HOH A 47 528 528 HOH HOH . T 6 HOH A 48 529 529 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 RSF . . . J 3 -18.385 59.932 -63.679 1 62.62 ? C5 RSF 212 A 1 HETATM 2 C C6 RSF . . . J 3 -17.026 59.357 -63.386 1 60.15 ? C6 RSF 212 A 1 HETATM 3 O O1 RSF . . . J 3 -18.684 59.472 -64.965 1 68.68 ? O1 RSF 212 A 1 HETATM 4 C C4 RSF . . . J 3 -16.319 57.524 -66.355 1 57.23 ? C4 RSF 212 A 1 HETATM 5 O O2 RSF . . . J 3 -17.552 58.18 -66.461 1 56.22 ? O2 RSF 212 A 1 HETATM 6 C C1 RSF . . . J 3 -17.515 59.331 -65.683 1 45.78 ? C1 RSF 212 A 1 HETATM 7 C C2 RSF . . . J 3 -16.417 59.238 -64.739 1 48.68 ? C2 RSF 212 A 1 HETATM 8 C C3 RSF . . . J 3 -15.843 57.908 -64.992 1 55.93 ? C3 RSF 212 A 1 HETATM 9 O O3 RSF . . . J 3 -16.292 57.007 -64.044 1 65.13 ? O3 RSF 212 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 9 #