data_3RSO # _model_server_result.job_id xBRrhgAWQTRQCzHd22M8gw _model_server_result.datetime_utc '2024-11-02 02:22:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rso # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":208}' # _entry.id 3RSO # _exptl.entry_id 3RSO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 130.142 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3S,3aR,6aS)-hexahydrofuro[2,3-b]furan-3-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3RSO _cell.length_a 88.496 _cell.length_b 88.496 _cell.length_c 134.094 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RSO _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 D MG MG . A MG 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc2 A O PHE 28 A PHE 28 1_555 C CA CA . A CA 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc3 A OD2 ASP 30 A ASP 30 1_555 C CA CA . A CA 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc4 A OG1 THR 35 A THR 35 1_555 D MG MG . A MG 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc5 A O ARG 102 A ARG 102 1_555 E CA CA . A CA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc6 A OD2 ASP 105 A ASP 105 1_555 E CA CA . A CA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? metalc ? metalc7 A OD1 ASP 105 A ASP 105 1_555 E CA CA . A CA 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? metalc ? metalc8 B O2G GNP . A GNP 190 1_555 D MG MG . A MG 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc9 B O2B GNP . A GNP 190 1_555 D MG MG . A MG 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc10 D MG MG . A MG 192 1_555 H O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc11 D MG MG . A MG 192 1_555 H O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc12 C CA CA . A CA 193 1_555 H O HOH . A HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc13 E CA CA . A CA 195 1_555 H O HOH . A HOH 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.098 ? # _chem_comp.formula 'C6 H10 O3' _chem_comp.formula_weight 130.142 _chem_comp.id RSG _chem_comp.mon_nstd_flag . _chem_comp.name (3S,3aR,6aS)-hexahydrofuro[2,3-b]furan-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C1 RSG sing 328 n n C1 O3 RSG sing 329 n n C1 C2 RSG sing 330 n n C1 H1 RSG sing 331 n n C4 O1 RSG sing 332 n n O1 C3 RSG sing 333 n n C2 C3 RSG sing 334 n n C2 C6 RSG sing 335 n n C2 H2 RSG sing 336 n n C3 O2 RSG sing 337 n n O2 C5 RSG sing 338 n n C3 H3 RSG sing 339 n n O3 HO3 RSG sing 340 n n C4 H4 RSG sing 341 n n C4 H4A RSG sing 342 n n C6 C5 RSG sing 343 n n C5 H5 RSG sing 344 n n C5 H5A RSG sing 345 n n C6 H6 RSG sing 346 n n C6 H6A RSG sing 347 n n # _atom_sites.entry_id 3RSO _atom_sites.fract_transf_matrix[1][1] 0.0113 _atom_sites.fract_transf_matrix[1][2] 0.006524 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013048 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007457 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GNP A 1 190 190 GNP GNP . C 3 CA A 1 193 193 CA CA . D 4 MG A 1 192 192 MG MG . E 3 CA A 1 195 195 CA CA . F 5 RSG A 1 204 204 RSG RSG . G 5 RSG A 1 208 208 RSG RSG . H 6 HOH A 1 301 301 HOH HOH . H 6 HOH A 2 302 302 HOH HOH . H 6 HOH A 3 303 303 HOH HOH . H 6 HOH A 4 304 304 HOH HOH . H 6 HOH A 5 305 305 HOH HOH . H 6 HOH A 6 306 306 HOH HOH . H 6 HOH A 7 307 307 HOH HOH . H 6 HOH A 8 308 308 HOH HOH . H 6 HOH A 9 309 309 HOH HOH . H 6 HOH A 10 310 310 HOH HOH . H 6 HOH A 11 311 311 HOH HOH . H 6 HOH A 12 312 312 HOH HOH . H 6 HOH A 13 313 313 HOH HOH . H 6 HOH A 14 314 314 HOH HOH . H 6 HOH A 15 315 315 HOH HOH . H 6 HOH A 16 316 316 HOH HOH . H 6 HOH A 17 317 317 HOH HOH . H 6 HOH A 18 318 318 HOH HOH . H 6 HOH A 19 319 319 HOH HOH . H 6 HOH A 20 320 320 HOH HOH . H 6 HOH A 21 321 321 HOH HOH . H 6 HOH A 22 322 322 HOH HOH . H 6 HOH A 23 323 323 HOH HOH . H 6 HOH A 24 324 324 HOH HOH . H 6 HOH A 25 325 325 HOH HOH . H 6 HOH A 26 326 326 HOH HOH . H 6 HOH A 27 327 327 HOH HOH . H 6 HOH A 28 328 328 HOH HOH . H 6 HOH A 29 329 329 HOH HOH . H 6 HOH A 30 330 330 HOH HOH . H 6 HOH A 31 331 331 HOH HOH . H 6 HOH A 32 332 332 HOH HOH . H 6 HOH A 33 333 333 HOH HOH . H 6 HOH A 34 334 334 HOH HOH . H 6 HOH A 35 335 335 HOH HOH . H 6 HOH A 36 336 336 HOH HOH . H 6 HOH A 37 337 337 HOH HOH . H 6 HOH A 38 338 338 HOH HOH . H 6 HOH A 39 339 339 HOH HOH . H 6 HOH A 40 340 340 HOH HOH . H 6 HOH A 41 341 341 HOH HOH . H 6 HOH A 42 342 342 HOH HOH . H 6 HOH A 43 343 343 HOH HOH . H 6 HOH A 44 344 344 HOH HOH . H 6 HOH A 45 345 345 HOH HOH . H 6 HOH A 46 346 346 HOH HOH . H 6 HOH A 47 347 347 HOH HOH . H 6 HOH A 48 348 348 HOH HOH . H 6 HOH A 49 349 349 HOH HOH . H 6 HOH A 50 350 350 HOH HOH . H 6 HOH A 51 351 351 HOH HOH . H 6 HOH A 52 352 352 HOH HOH . H 6 HOH A 53 353 353 HOH HOH . H 6 HOH A 54 354 354 HOH HOH . H 6 HOH A 55 355 355 HOH HOH . H 6 HOH A 56 356 356 HOH HOH . H 6 HOH A 57 357 357 HOH HOH . H 6 HOH A 58 358 358 HOH HOH . H 6 HOH A 59 359 359 HOH HOH . H 6 HOH A 60 360 360 HOH HOH . H 6 HOH A 61 361 361 HOH HOH . H 6 HOH A 62 362 362 HOH HOH . H 6 HOH A 63 363 363 HOH HOH . H 6 HOH A 64 364 364 HOH HOH . H 6 HOH A 65 366 366 HOH HOH . H 6 HOH A 66 367 367 HOH HOH . H 6 HOH A 67 368 368 HOH HOH . H 6 HOH A 68 369 369 HOH HOH . H 6 HOH A 69 370 370 HOH HOH . H 6 HOH A 70 371 371 HOH HOH . H 6 HOH A 71 373 373 HOH HOH . H 6 HOH A 72 374 374 HOH HOH . H 6 HOH A 73 377 377 HOH HOH . H 6 HOH A 74 378 378 HOH HOH . H 6 HOH A 75 379 379 HOH HOH . H 6 HOH A 76 381 381 HOH HOH . H 6 HOH A 77 382 382 HOH HOH . H 6 HOH A 78 383 383 HOH HOH . H 6 HOH A 79 384 384 HOH HOH . H 6 HOH A 80 386 386 HOH HOH . H 6 HOH A 81 388 388 HOH HOH . H 6 HOH A 82 389 389 HOH HOH . H 6 HOH A 83 391 391 HOH HOH . H 6 HOH A 84 393 393 HOH HOH . H 6 HOH A 85 394 394 HOH HOH . H 6 HOH A 86 395 395 HOH HOH . H 6 HOH A 87 396 396 HOH HOH . H 6 HOH A 88 397 397 HOH HOH . H 6 HOH A 89 399 399 HOH HOH . H 6 HOH A 90 403 403 HOH HOH . H 6 HOH A 91 405 405 HOH HOH . H 6 HOH A 92 406 406 HOH HOH . H 6 HOH A 93 407 407 HOH HOH . H 6 HOH A 94 408 408 HOH HOH . H 6 HOH A 95 409 409 HOH HOH . H 6 HOH A 96 410 410 HOH HOH . H 6 HOH A 97 412 412 HOH HOH . H 6 HOH A 98 413 413 HOH HOH . H 6 HOH A 99 414 414 HOH HOH . H 6 HOH A 100 416 416 HOH HOH . H 6 HOH A 101 420 420 HOH HOH . H 6 HOH A 102 421 421 HOH HOH . H 6 HOH A 103 424 424 HOH HOH . H 6 HOH A 104 427 427 HOH HOH . H 6 HOH A 105 428 428 HOH HOH . H 6 HOH A 106 429 429 HOH HOH . H 6 HOH A 107 430 430 HOH HOH . H 6 HOH A 108 431 431 HOH HOH . H 6 HOH A 109 435 435 HOH HOH . H 6 HOH A 110 438 438 HOH HOH . H 6 HOH A 111 441 441 HOH HOH . H 6 HOH A 112 444 444 HOH HOH . H 6 HOH A 113 448 448 HOH HOH . H 6 HOH A 114 449 449 HOH HOH . H 6 HOH A 115 450 450 HOH HOH . H 6 HOH A 116 459 459 HOH HOH . H 6 HOH A 117 462 462 HOH HOH . H 6 HOH A 118 469 469 HOH HOH . H 6 HOH A 119 473 473 HOH HOH . H 6 HOH A 120 474 474 HOH HOH . H 6 HOH A 121 475 475 HOH HOH . H 6 HOH A 122 476 476 HOH HOH . H 6 HOH A 123 477 477 HOH HOH . H 6 HOH A 124 478 478 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 RSG . . . G 5 -0.688 63.324 -68.732 1 52.29 ? C1 RSG 208 A 1 HETATM 2 O O1 RSG . . . G 5 -2.851 63.816 -69.404 1 51.57 ? O1 RSG 208 A 1 HETATM 3 C C2 RSG . . . G 5 -0.568 64.39 -69.815 1 46.48 ? C2 RSG 208 A 1 HETATM 4 O O2 RSG . . . G 5 -2.159 64.282 -71.595 1 37.53 ? O2 RSG 208 A 1 HETATM 5 C C3 RSG . . . G 5 -2.025 64.692 -70.212 1 43.03 ? C3 RSG 208 A 1 HETATM 6 O O3 RSG . . . G 5 -0.608 62.026 -69.326 1 63.4 ? O3 RSG 208 A 1 HETATM 7 C C4 RSG . . . G 5 -2.098 63.56 -68.209 1 52.93 ? C4 RSG 208 A 1 HETATM 8 C C5 RSG . . . G 5 -0.848 64.403 -72.167 1 46.78 ? C5 RSG 208 A 1 HETATM 9 C C6 RSG . . . G 5 0.057 63.826 -71.087 1 48.45 ? C6 RSG 208 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 9 #