data_3RSZ # _model_server_result.job_id X3TZ49NI2eQgpaW0N4Eh-Q _model_server_result.datetime_utc '2024-10-12 15:29:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rsz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":804}' # _entry.id 3RSZ # _exptl.entry_id 3RSZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.25 _cell.angle_gamma 90 _cell.entry_id 3RSZ _cell.length_a 96.557 _cell.length_b 166.731 _cell.length_c 121.136 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RSZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 W N N ? 4 X N N ? 4 Y N N ? 4 Z N N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 GLC GLC C1 O1 . O4 HO4 . sing 2 ? 3 3 2 GLC GLC C1 O1 . O4 HO4 . sing 3 ? 3 4 3 GLC GLC C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n G GLC 1 G 1 GLC A 904 GLC 3 n G GLC 2 G 2 GLC A 903 GLC 3 n G GLC 3 G 3 GLC A 902 GLC 3 n G GLC 4 G 4 GLC A 901 GLC 3 n H GLC 1 H 1 GLC A 908 GLC 3 n H GLC 2 H 2 GLC A 907 GLC 3 n H GLC 3 H 3 GLC A 906 GLC 3 n H GLC 4 H 4 GLC A 905 GLC 3 n I GLC 1 I 1 GLC B 904 GLC 3 n I GLC 2 I 2 GLC B 903 GLC 3 n I GLC 3 I 3 GLC B 902 GLC 3 n I GLC 4 I 4 GLC B 901 GLC 3 n J GLC 1 J 1 GLC B 908 GLC 3 n J GLC 2 J 2 GLC B 907 GLC 3 n J GLC 3 J 3 GLC B 906 GLC 3 n J GLC 4 J 4 GLC B 905 GLC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 G O4 GLC . G GLC 1 1_555 G C1 GLC . G GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? covale ? covale2 G O4 GLC . G GLC 2 1_555 G C1 GLC . G GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.469 ? covale ? covale3 G O4 GLC . G GLC 3 1_555 G C1 GLC . G GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.499 ? covale ? covale4 H O4 GLC . H GLC 1 1_555 H C1 GLC . H GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale5 H O4 GLC . H GLC 2 1_555 H C1 GLC . H GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale6 H O4 GLC . H GLC 3 1_555 H C1 GLC . H GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.465 ? covale ? covale7 I O4 GLC . I GLC 1 1_555 I C1 GLC . I GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.418 ? covale ? covale8 I O4 GLC . I GLC 2 1_555 I C1 GLC . I GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale9 I O4 GLC . I GLC 3 1_555 I C1 GLC . I GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.461 ? covale ? covale10 J O4 GLC . J GLC 1 1_555 J C1 GLC . J GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale11 J O4 GLC . J GLC 2 1_555 J C1 GLC . J GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale12 J O4 GLC . J GLC 3 1_555 J C1 GLC . J GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 312 n n S O2 SO4 doub 313 n n S O3 SO4 sing 314 n n S O4 SO4 sing 315 n n # _atom_sites.entry_id 3RSZ _atom_sites.fract_transf_matrix[1][1] 0.010357 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002439 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005998 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008481 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 4 SO4 A 1 801 801 SO4 SO4 . L 4 SO4 A 1 802 802 SO4 SO4 . M 4 SO4 A 1 804 804 SO4 SO4 . N 4 SO4 A 1 803 803 SO4 SO4 . O 4 SO4 B 1 801 801 SO4 SO4 . P 4 SO4 B 1 802 802 SO4 SO4 . Q 4 SO4 B 1 706 802 SO4 SO4 . R 4 SO4 B 1 804 804 SO4 SO4 . S 4 SO4 C 1 803 803 SO4 SO4 . T 4 SO4 C 1 706 803 SO4 SO4 . U 4 SO4 C 1 801 801 SO4 SO4 . V 4 SO4 C 1 804 804 SO4 SO4 . W 4 SO4 D 1 803 803 SO4 SO4 . X 4 SO4 D 1 801 801 SO4 SO4 . Y 4 SO4 D 1 802 802 SO4 SO4 . Z 4 SO4 D 1 804 804 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . V 4 -7.165 8.805 20.983 1 133.68 ? S SO4 804 C 1 HETATM 2 O O1 SO4 . . . V 4 -8.569 8.999 21.335 1 131.92 ? O1 SO4 804 C 1 HETATM 3 O O2 SO4 . . . V 4 -6.299 9.204 22.093 1 126.74 ? O2 SO4 804 C 1 HETATM 4 O O3 SO4 . . . V 4 -6.946 7.387 20.691 1 128.79 ? O3 SO4 804 C 1 HETATM 5 O O4 SO4 . . . V 4 -6.851 9.631 19.819 1 128.07 ? O4 SO4 804 C 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #