data_3RT7 # _model_server_result.job_id djLGRY2V2RnkiQgblda8Tg _model_server_result.datetime_utc '2024-11-22 08:41:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rt7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":492}' # _entry.id 3RT7 # _exptl.entry_id 3RT7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RT7 _cell.length_a 122.138 _cell.length_b 122.138 _cell.length_c 155.337 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RT7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 0 0 -155.337 6 'crystal symmetry operation' 6_554 x,-y,-z-1 1 0 0 0 -1 0 0 0 -1 0 0 -155.337 7 'crystal symmetry operation' 7_554 y,x,-z-1 0 1 0 1 0 0 0 0 -1 0 0 -155.337 8 'crystal symmetry operation' 8_554 -y,-x,-z-1 0 -1 0 -1 0 0 0 0 -1 0 0 -155.337 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 64 A ASN 52 1_555 C K K . A K 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.849 ? metalc ? metalc2 A O ASP 126 A ASP 114 1_555 C K K . A K 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? metalc ? metalc3 A OD2 ASP 126 A ASP 114 1_555 C K K . A K 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.364 ? metalc ? metalc4 A O PHE 129 A PHE 117 1_555 C K K . A K 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? metalc ? metalc5 A O VAL 158 A VAL 146 1_555 C K K . A K 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? metalc ? metalc6 A O VAL 160 A VAL 148 1_555 C K K . A K 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? metalc ? metalc7 A OG SER 162 A SER 150 1_555 C K K . A K 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.934 ? metalc ? metalc8 D MG MG . A MG 492 1_555 F O1A ADQ . A ADQ 494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc9 D MG MG . A MG 492 1_555 F O3B ADQ . A ADQ 494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc10 D MG MG . A MG 492 1_555 I O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc11 D MG MG . A MG 492 1_555 I O HOH . A HOH 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc12 D MG MG . A MG 492 1_555 I O HOH . A HOH 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3RT7 _atom_sites.fract_transf_matrix[1][1] 0.008187 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006438 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 K A 1 491 1 K K . D 4 MG A 1 492 2 MG MG . E 5 ADQ A 1 493 3 ADQ ADQ . F 5 ADQ A 1 494 4 ADQ ADQ . G 5 ADQ A 1 495 5 ADQ ADQ . H 6 GOL A 1 496 6 GOL GOL . I 7 HOH A 1 497 1 HOH HOH . I 7 HOH A 2 498 2 HOH HOH . I 7 HOH A 3 499 3 HOH HOH . I 7 HOH A 4 500 4 HOH HOH . I 7 HOH A 5 501 5 HOH HOH . I 7 HOH A 6 502 6 HOH HOH . I 7 HOH A 7 503 7 HOH HOH . I 7 HOH A 8 504 8 HOH HOH . I 7 HOH A 9 505 9 HOH HOH . I 7 HOH A 10 506 10 HOH HOH . I 7 HOH A 11 507 11 HOH HOH . I 7 HOH A 12 508 12 HOH HOH . I 7 HOH A 13 509 13 HOH HOH . I 7 HOH A 14 510 14 HOH HOH . I 7 HOH A 15 511 15 HOH HOH . I 7 HOH A 16 512 16 HOH HOH . I 7 HOH A 17 513 17 HOH HOH . I 7 HOH A 18 514 18 HOH HOH . I 7 HOH A 19 515 19 HOH HOH . I 7 HOH A 20 516 20 HOH HOH . I 7 HOH A 21 517 21 HOH HOH . I 7 HOH A 22 518 22 HOH HOH . I 7 HOH A 23 519 23 HOH HOH . I 7 HOH A 24 520 24 HOH HOH . I 7 HOH A 25 521 25 HOH HOH . I 7 HOH A 26 522 26 HOH HOH . I 7 HOH A 27 523 27 HOH HOH . I 7 HOH A 28 524 28 HOH HOH . I 7 HOH A 29 525 29 HOH HOH . I 7 HOH A 30 526 30 HOH HOH . I 7 HOH A 31 527 31 HOH HOH . I 7 HOH A 32 528 32 HOH HOH . I 7 HOH A 33 529 33 HOH HOH . I 7 HOH A 34 530 34 HOH HOH . I 7 HOH A 35 531 35 HOH HOH . I 7 HOH A 36 532 36 HOH HOH . I 7 HOH A 37 533 37 HOH HOH . I 7 HOH A 38 534 38 HOH HOH . I 7 HOH A 39 535 39 HOH HOH . I 7 HOH A 40 536 40 HOH HOH . I 7 HOH A 41 537 41 HOH HOH . I 7 HOH A 42 538 42 HOH HOH . I 7 HOH A 43 539 43 HOH HOH . I 7 HOH A 44 540 44 HOH HOH . I 7 HOH A 45 541 45 HOH HOH . I 7 HOH A 46 542 46 HOH HOH . I 7 HOH A 47 543 47 HOH HOH . I 7 HOH A 48 544 48 HOH HOH . I 7 HOH A 49 545 49 HOH HOH . I 7 HOH A 50 546 50 HOH HOH . I 7 HOH A 51 547 51 HOH HOH . I 7 HOH A 52 548 52 HOH HOH . I 7 HOH A 53 549 53 HOH HOH . I 7 HOH A 54 550 54 HOH HOH . I 7 HOH A 55 551 55 HOH HOH . I 7 HOH A 56 552 56 HOH HOH . I 7 HOH A 57 553 57 HOH HOH . I 7 HOH A 58 554 58 HOH HOH . I 7 HOH A 59 555 59 HOH HOH . I 7 HOH A 60 556 60 HOH HOH . I 7 HOH A 61 557 61 HOH HOH . I 7 HOH A 62 558 62 HOH HOH . I 7 HOH A 63 559 63 HOH HOH . I 7 HOH A 64 560 64 HOH HOH . I 7 HOH A 65 561 65 HOH HOH . I 7 HOH A 66 562 66 HOH HOH . I 7 HOH A 67 563 67 HOH HOH . I 7 HOH A 68 564 68 HOH HOH . I 7 HOH A 69 565 69 HOH HOH . I 7 HOH A 70 566 70 HOH HOH . I 7 HOH A 71 567 71 HOH HOH . I 7 HOH A 72 568 72 HOH HOH . I 7 HOH A 73 569 73 HOH HOH . I 7 HOH A 74 570 74 HOH HOH . I 7 HOH A 75 571 75 HOH HOH . I 7 HOH A 76 572 76 HOH HOH . I 7 HOH A 77 573 77 HOH HOH . I 7 HOH A 78 574 78 HOH HOH . I 7 HOH A 79 575 79 HOH HOH . I 7 HOH A 80 576 80 HOH HOH . I 7 HOH A 81 577 81 HOH HOH . I 7 HOH A 82 578 82 HOH HOH . I 7 HOH A 83 579 83 HOH HOH . I 7 HOH A 84 580 84 HOH HOH . I 7 HOH A 85 581 85 HOH HOH . I 7 HOH A 86 582 86 HOH HOH . I 7 HOH A 87 583 87 HOH HOH . I 7 HOH A 88 584 88 HOH HOH . I 7 HOH A 89 585 89 HOH HOH . I 7 HOH A 90 586 90 HOH HOH . I 7 HOH A 91 587 91 HOH HOH . I 7 HOH A 92 588 92 HOH HOH . I 7 HOH A 93 589 93 HOH HOH . I 7 HOH A 94 590 94 HOH HOH . I 7 HOH A 95 591 95 HOH HOH . I 7 HOH A 96 592 96 HOH HOH . I 7 HOH A 97 593 97 HOH HOH . I 7 HOH A 98 594 98 HOH HOH . I 7 HOH A 99 595 99 HOH HOH . I 7 HOH A 100 596 100 HOH HOH . I 7 HOH A 101 597 101 HOH HOH . I 7 HOH A 102 598 102 HOH HOH . I 7 HOH A 103 599 103 HOH HOH . I 7 HOH A 104 600 104 HOH HOH . I 7 HOH A 105 601 105 HOH HOH . I 7 HOH A 106 602 106 HOH HOH . I 7 HOH A 107 603 107 HOH HOH . I 7 HOH A 108 604 108 HOH HOH . I 7 HOH A 109 605 109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -23.407 _atom_site.Cartn_y -3.582 _atom_site.Cartn_z -34.508 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 492 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #