data_3RTR # _model_server_result.job_id Il7VA1WRMzrxpUB396vUYQ _model_server_result.datetime_utc '2025-02-05 07:47:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rtr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":210}' # _entry.id 3RTR # _exptl.entry_id 3RTR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RTR _cell.length_a 88.475 _cell.length_b 119.796 _cell.length_c 231.861 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RTR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression G,H,R,S,T 1 1 A,B,I,J,K 2 1 C,D,L,M,N 3 1 E,F,O,P,Q 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 40 B CYS 42 1_555 I ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc2 B SG CYS 43 B CYS 45 1_555 I ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc3 B SG CYS 51 B CYS 53 1_555 K ZN ZN . B ZN 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc4 B SG CYS 54 B CYS 56 1_555 K ZN ZN . B ZN 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc5 B SG CYS 66 B CYS 68 1_555 K ZN ZN . B ZN 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc6 B SG CYS 73 B CYS 75 1_555 J ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc7 B ND1 HIS 75 B HIS 77 1_555 J ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc8 B ND1 HIS 78 B HIS 80 1_555 I ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc9 B ND1 HIS 80 B HIS 82 1_555 K ZN ZN . B ZN 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc10 B SG CYS 81 B CYS 83 1_555 I ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc11 B SG CYS 92 B CYS 94 1_555 J ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc12 B OD2 ASP 95 B ASP 97 1_555 J ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc13 D SG CYS 40 D CYS 42 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc14 D SG CYS 43 D CYS 45 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc15 D SG CYS 51 D CYS 53 1_555 N ZN ZN . D ZN 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc16 D SG CYS 54 D CYS 56 1_555 N ZN ZN . D ZN 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc17 D SG CYS 66 D CYS 68 1_555 N ZN ZN . D ZN 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc18 D SG CYS 73 D CYS 75 1_555 M ZN ZN . D ZN 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc19 D ND1 HIS 75 D HIS 77 1_555 M ZN ZN . D ZN 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc20 D ND1 HIS 78 D HIS 80 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc21 D ND1 HIS 80 D HIS 82 1_555 N ZN ZN . D ZN 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc22 D SG CYS 81 D CYS 83 1_555 L ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc23 D SG CYS 92 D CYS 94 1_555 M ZN ZN . D ZN 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc24 D OD2 ASP 95 D ASP 97 1_555 M ZN ZN . D ZN 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc25 F SG CYS 40 F CYS 42 1_555 O ZN ZN . F ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc26 F SG CYS 43 F CYS 45 1_555 O ZN ZN . F ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc27 F SG CYS 51 F CYS 53 1_555 Q ZN ZN . F ZN 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc28 F SG CYS 54 F CYS 56 1_555 Q ZN ZN . F ZN 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc29 F SG CYS 66 F CYS 68 1_555 Q ZN ZN . F ZN 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc30 F SG CYS 73 F CYS 75 1_555 P ZN ZN . F ZN 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc31 F ND1 HIS 75 F HIS 77 1_555 P ZN ZN . F ZN 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc32 F ND1 HIS 78 F HIS 80 1_555 O ZN ZN . F ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc33 F ND1 HIS 80 F HIS 82 1_555 Q ZN ZN . F ZN 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc34 F SG CYS 81 F CYS 83 1_555 O ZN ZN . F ZN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc35 F SG CYS 92 F CYS 94 1_555 P ZN ZN . F ZN 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc36 F OD2 ASP 95 F ASP 97 1_555 P ZN ZN . F ZN 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc37 H SG CYS 40 H CYS 42 1_555 R ZN ZN . H ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc38 H SG CYS 43 H CYS 45 1_555 R ZN ZN . H ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc39 H SG CYS 51 H CYS 53 1_555 T ZN ZN . H ZN 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc40 H SG CYS 54 H CYS 56 1_555 T ZN ZN . H ZN 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc41 H SG CYS 66 H CYS 68 1_555 T ZN ZN . H ZN 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc42 H SG CYS 73 H CYS 75 1_555 S ZN ZN . H ZN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc43 H ND1 HIS 75 H HIS 77 1_555 S ZN ZN . H ZN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc44 H ND1 HIS 78 H HIS 80 1_555 R ZN ZN . H ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc45 H ND1 HIS 80 H HIS 82 1_555 T ZN ZN . H ZN 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc46 H SG CYS 81 H CYS 83 1_555 R ZN ZN . H ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc47 H SG CYS 92 H CYS 94 1_555 S ZN ZN . H ZN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc48 H OD2 ASP 95 H ASP 97 1_555 S ZN ZN . H ZN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3RTR _atom_sites.fract_transf_matrix[1][1] 0.011303 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008348 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004313 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 ZN B 1 202 202 ZN ZN . J 3 ZN B 1 206 206 ZN ZN . K 3 ZN B 1 210 210 ZN ZN . L 3 ZN D 1 201 201 ZN ZN . M 3 ZN D 1 205 205 ZN ZN . N 3 ZN D 1 209 209 ZN ZN . O 3 ZN F 1 204 204 ZN ZN . P 3 ZN F 1 208 208 ZN ZN . Q 3 ZN F 1 212 212 ZN ZN . R 3 ZN H 1 203 203 ZN ZN . S 3 ZN H 1 207 207 ZN ZN . T 3 ZN H 1 211 211 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 3 _atom_site.Cartn_x -26.207 _atom_site.Cartn_y 21.819 _atom_site.Cartn_z 65.718 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 88.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 210 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #