data_3RTX
#
_model_server_result.job_id            akhSSuZ4vxDxm3IIERdvmQ 
_model_server_result.datetime_utc      '2025-04-27 10:29:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rtx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1}' 
#
_entry.id    3RTX 
#
_exptl.entry_id    3RTX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              151.126 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GUANINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3RTX 
_cell.length_a            82.98 
_cell.length_b            114.75 
_cell.length_c            150.22 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RTX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA trimeric 3 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,F 1 1 
B,C,E,G 2 1 
A,B,C,D,E,F,G 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C SEP 2 C SEP 2 1_555 C N PRO 3 C PRO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale2 C C TYR 5 C TYR 5 1_555 C N SEP 6 C SEP 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 C C SEP 6 C SEP 6 1_555 C N PRO 7 C PRO 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale4 C C THR 8 C THR 8 1_555 C N SEP 9 C SEP 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale5 C C SEP 9 C SEP 9 1_555 C N PRO 10 C PRO 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale6 C C TYR 12 C TYR 12 1_555 C N SEP 13 C SEP 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale7 C C SEP 13 C SEP 13 1_555 C N PRO 14 C PRO 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? 
#
_chem_comp.formula           'C5 H5 N5 O' 
_chem_comp.formula_weight    151.126 
_chem_comp.id                GUN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GUANINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9 C8 GUN sing 129 n y 
N9 C4 GUN sing 130 n y 
N9 HN9 GUN sing 131 n n 
C8 N7 GUN doub 132 n y 
C8 H8 GUN sing 133 n n 
N7 C5 GUN sing 134 n y 
C5 C6 GUN sing 135 n n 
C5 C4 GUN doub 136 n y 
C6 O6 GUN doub 137 n n 
C6 N1 GUN sing 138 n n 
N1 C2 GUN sing 139 n n 
N1 HN1 GUN sing 140 n n 
C2 N2 GUN sing 141 n n 
C2 N3 GUN doub 142 n n 
N2 HN21 GUN sing 143 n n 
N2 HN22 GUN sing 144 n n 
N3 C4 GUN sing 145 n n 
#
_atom_sites.entry_id                     3RTX 
_atom_sites.fract_transf_matrix[1][1]    0.012051 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008715 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006657 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 GUN A 1 1 1 GUN GUN . 
E 3 GUN B 1 2 2 GUN GUN . 
F 4 HOH A 1 5 5 HOH HOH . 
F 4 HOH A 2 6 6 HOH HOH . 
F 4 HOH A 3 7 7 HOH HOH . 
F 4 HOH A 4 8 8 HOH HOH . 
F 4 HOH A 5 10 10 HOH HOH . 
F 4 HOH A 6 14 14 HOH HOH . 
F 4 HOH A 7 17 17 HOH HOH . 
F 4 HOH A 8 19 19 HOH HOH . 
F 4 HOH A 9 24 24 HOH HOH . 
F 4 HOH A 10 25 25 HOH HOH . 
F 4 HOH A 11 27 27 HOH HOH . 
F 4 HOH A 12 29 29 HOH HOH . 
F 4 HOH A 13 31 31 HOH HOH . 
F 4 HOH A 14 32 32 HOH HOH . 
F 4 HOH A 15 33 33 HOH HOH . 
F 4 HOH A 16 36 36 HOH HOH . 
F 4 HOH A 17 41 41 HOH HOH . 
F 4 HOH A 18 44 44 HOH HOH . 
F 4 HOH A 19 45 45 HOH HOH . 
F 4 HOH A 20 46 46 HOH HOH . 
F 4 HOH A 21 48 48 HOH HOH . 
F 4 HOH A 22 49 49 HOH HOH . 
F 4 HOH A 23 51 51 HOH HOH . 
F 4 HOH A 24 54 54 HOH HOH . 
F 4 HOH A 25 55 55 HOH HOH . 
F 4 HOH A 26 60 60 HOH HOH . 
F 4 HOH A 27 61 61 HOH HOH . 
F 4 HOH A 28 63 63 HOH HOH . 
F 4 HOH A 29 64 64 HOH HOH . 
F 4 HOH A 30 65 65 HOH HOH . 
F 4 HOH A 31 67 67 HOH HOH . 
F 4 HOH A 32 69 69 HOH HOH . 
F 4 HOH A 33 72 72 HOH HOH . 
F 4 HOH A 34 78 78 HOH HOH . 
F 4 HOH A 35 79 79 HOH HOH . 
F 4 HOH A 36 82 82 HOH HOH . 
F 4 HOH A 37 84 84 HOH HOH . 
F 4 HOH A 38 85 85 HOH HOH . 
F 4 HOH A 39 86 86 HOH HOH . 
F 4 HOH A 40 87 87 HOH HOH . 
F 4 HOH A 41 88 88 HOH HOH . 
F 4 HOH A 42 89 89 HOH HOH . 
F 4 HOH A 43 90 90 HOH HOH . 
F 4 HOH A 44 91 91 HOH HOH . 
F 4 HOH A 45 95 95 HOH HOH . 
F 4 HOH A 46 96 96 HOH HOH . 
F 4 HOH A 47 99 99 HOH HOH . 
F 4 HOH A 48 101 101 HOH HOH . 
F 4 HOH A 49 102 102 HOH HOH . 
F 4 HOH A 50 103 103 HOH HOH . 
F 4 HOH A 51 104 104 HOH HOH . 
F 4 HOH A 52 105 105 HOH HOH . 
F 4 HOH A 53 107 107 HOH HOH . 
F 4 HOH A 54 111 111 HOH HOH . 
F 4 HOH A 55 117 117 HOH HOH . 
F 4 HOH A 56 118 118 HOH HOH . 
F 4 HOH A 57 120 120 HOH HOH . 
F 4 HOH A 58 121 121 HOH HOH . 
F 4 HOH A 59 568 1 HOH HOH . 
G 4 HOH B 1 3 3 HOH HOH . 
G 4 HOH B 2 4 4 HOH HOH . 
G 4 HOH B 3 9 9 HOH HOH . 
G 4 HOH B 4 11 11 HOH HOH . 
G 4 HOH B 5 12 12 HOH HOH . 
G 4 HOH B 6 13 13 HOH HOH . 
G 4 HOH B 7 15 15 HOH HOH . 
G 4 HOH B 8 16 16 HOH HOH . 
G 4 HOH B 9 18 18 HOH HOH . 
G 4 HOH B 10 20 20 HOH HOH . 
G 4 HOH B 11 21 21 HOH HOH . 
G 4 HOH B 12 22 22 HOH HOH . 
G 4 HOH B 13 23 23 HOH HOH . 
G 4 HOH B 14 26 26 HOH HOH . 
G 4 HOH B 15 28 28 HOH HOH . 
G 4 HOH B 16 30 30 HOH HOH . 
G 4 HOH B 17 34 34 HOH HOH . 
G 4 HOH B 18 35 35 HOH HOH . 
G 4 HOH B 19 37 37 HOH HOH . 
G 4 HOH B 20 38 38 HOH HOH . 
G 4 HOH B 21 39 39 HOH HOH . 
G 4 HOH B 22 40 40 HOH HOH . 
G 4 HOH B 23 42 42 HOH HOH . 
G 4 HOH B 24 43 43 HOH HOH . 
G 4 HOH B 25 47 47 HOH HOH . 
G 4 HOH B 26 50 50 HOH HOH . 
G 4 HOH B 27 52 52 HOH HOH . 
G 4 HOH B 28 53 53 HOH HOH . 
G 4 HOH B 29 56 56 HOH HOH . 
G 4 HOH B 30 57 57 HOH HOH . 
G 4 HOH B 31 58 58 HOH HOH . 
G 4 HOH B 32 59 59 HOH HOH . 
G 4 HOH B 33 62 62 HOH HOH . 
G 4 HOH B 34 66 66 HOH HOH . 
G 4 HOH B 35 68 68 HOH HOH . 
G 4 HOH B 36 70 70 HOH HOH . 
G 4 HOH B 37 71 71 HOH HOH . 
G 4 HOH B 38 73 73 HOH HOH . 
G 4 HOH B 39 74 74 HOH HOH . 
G 4 HOH B 40 75 75 HOH HOH . 
G 4 HOH B 41 76 76 HOH HOH . 
G 4 HOH B 42 77 77 HOH HOH . 
G 4 HOH B 43 80 80 HOH HOH . 
G 4 HOH B 44 81 81 HOH HOH . 
G 4 HOH B 45 83 83 HOH HOH . 
G 4 HOH B 46 92 92 HOH HOH . 
G 4 HOH B 47 93 93 HOH HOH . 
G 4 HOH B 48 94 94 HOH HOH . 
G 4 HOH B 49 97 97 HOH HOH . 
G 4 HOH B 50 98 98 HOH HOH . 
G 4 HOH B 51 100 100 HOH HOH . 
G 4 HOH B 52 106 106 HOH HOH . 
G 4 HOH B 53 108 108 HOH HOH . 
G 4 HOH B 54 109 109 HOH HOH . 
G 4 HOH B 55 110 110 HOH HOH . 
G 4 HOH B 56 112 112 HOH HOH . 
G 4 HOH B 57 113 113 HOH HOH . 
G 4 HOH B 58 114 114 HOH HOH . 
G 4 HOH B 59 115 115 HOH HOH . 
G 4 HOH B 60 116 116 HOH HOH . 
G 4 HOH B 61 119 119 HOH HOH . 
G 4 HOH B 62 122 122 HOH HOH . 
G 4 HOH B 63 568 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N9 GUN . . . D 3 9.771 16.056 -50.828 1 96.78 ? N9 GUN 1 A 1 
HETATM 2 C C8 GUN . . . D 3 9.092 15.598 -51.907 1 98.08 ? C8 GUN 1 A 1 
HETATM 3 N N7 GUN . . . D 3 8.335 16.592 -52.424 1 97.23 ? N7 GUN 1 A 1 
HETATM 4 C C5 GUN . . . D 3 8.533 17.69 -51.669 1 98.58 ? C5 GUN 1 A 1 
HETATM 5 C C6 GUN . . . D 3 8.035 19.025 -51.699 1 98.49 ? C6 GUN 1 A 1 
HETATM 6 O O6 GUN . . . D 3 7.221 19.368 -52.586 1 98.57 ? O6 GUN 1 A 1 
HETATM 7 N N1 GUN . . . D 3 8.448 19.945 -50.748 1 95.67 ? N1 GUN 1 A 1 
HETATM 8 C C2 GUN . . . D 3 9.335 19.607 -49.763 1 92.66 ? C2 GUN 1 A 1 
HETATM 9 N N2 GUN . . . D 3 9.716 20.527 -48.853 1 90.23 ? N2 GUN 1 A 1 
HETATM 10 N N3 GUN . . . D 3 9.838 18.316 -49.709 1 93.94 ? N3 GUN 1 A 1 
HETATM 11 C C4 GUN . . . D 3 9.449 17.348 -50.65 1 96.59 ? C4 GUN 1 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           360 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           11 
#