data_3RUQ # _model_server_result.job_id BrF16sCydrJc6gxEdxM3hg _model_server_result.datetime_utc '2024-11-13 07:16:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ruq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":544}' # _entry.id 3RUQ # _exptl.entry_id 3RUQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RUQ _cell.length_a 162.164 _cell.length_b 185.002 _cell.length_c 184.769 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RUQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -162.164 0 0 3 'crystal symmetry operation' 3_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -162.164 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 91 A ASP 91 1_555 E MG MG . A MG 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc2 A OD2 ASP 91 A ASP 91 1_555 E MG MG . A MG 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.884 ? metalc ? metalc3 E MG MG . A MG 544 1_555 F O2A ADP . A ADP 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc4 E MG MG . A MG 544 1_555 F O3B ADP . A ADP 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc5 E MG MG . A MG 544 1_555 M O HOH . A HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc6 E MG MG . A MG 544 1_555 M O HOH . A HOH 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc7 B OD1 ASP 91 B ASP 91 1_555 G MG MG . B MG 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc8 B OD2 ASP 91 B ASP 91 1_555 G MG MG . B MG 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? metalc ? metalc9 G MG MG . B MG 544 1_555 H O3B ADP . B ADP 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc10 G MG MG . B MG 544 1_555 H O2A ADP . B ADP 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc11 G MG MG . B MG 544 1_555 N O HOH . B HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc12 G MG MG . B MG 544 1_555 N O HOH . B HOH 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc13 G MG MG . B MG 544 1_555 N O HOH . B HOH 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc14 C OD1 ASP 91 C ASP 91 1_555 I MG MG . C MG 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc15 I MG MG . C MG 544 1_555 J O2A ADP . C ADP 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc16 I MG MG . C MG 544 1_555 J O3B ADP . C ADP 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc17 I MG MG . C MG 544 1_555 O O HOH . C HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc18 I MG MG . C MG 544 1_555 O O HOH . C HOH 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc19 I MG MG . C MG 544 1_555 O O HOH . C HOH 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc20 D OD1 ASP 91 D ASP 91 1_555 K MG MG . D MG 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc21 K MG MG . D MG 544 1_555 L O2A ADP . D ADP 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc22 K MG MG . D MG 544 1_555 L O1B ADP . D ADP 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc23 K MG MG . D MG 544 1_555 P O HOH . D HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc24 K MG MG . D MG 544 1_555 P O HOH . D HOH 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc25 K MG MG . D MG 544 1_555 P O HOH . D HOH 554 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3RUQ _atom_sites.fract_transf_matrix[1][1] 0.006167 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005405 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005412 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 544 544 MG MG . F 3 ADP A 1 545 545 ADP ADP . G 2 MG B 1 544 544 MG MG . H 3 ADP B 1 545 545 ADP ADP . I 2 MG C 1 544 544 MG MG . J 3 ADP C 1 545 545 ADP ADP . K 2 MG D 1 544 544 MG MG . L 3 ADP D 1 545 545 ADP ADP . M 4 HOH A 1 546 1 HOH HOH . M 4 HOH A 2 547 12 HOH HOH . M 4 HOH A 3 548 13 HOH HOH . M 4 HOH A 4 549 14 HOH HOH . M 4 HOH A 5 550 17 HOH HOH . M 4 HOH A 6 551 19 HOH HOH . M 4 HOH A 7 552 22 HOH HOH . M 4 HOH A 8 553 26 HOH HOH . M 4 HOH A 9 554 30 HOH HOH . M 4 HOH A 10 555 31 HOH HOH . M 4 HOH A 11 556 37 HOH HOH . M 4 HOH A 12 557 38 HOH HOH . M 4 HOH A 13 558 39 HOH HOH . M 4 HOH A 14 559 43 HOH HOH . M 4 HOH A 15 560 44 HOH HOH . M 4 HOH A 16 561 50 HOH HOH . M 4 HOH A 17 562 59 HOH HOH . N 4 HOH B 1 546 2 HOH HOH . N 4 HOH B 2 547 8 HOH HOH . N 4 HOH B 3 548 11 HOH HOH . N 4 HOH B 4 549 20 HOH HOH . N 4 HOH B 5 550 28 HOH HOH . N 4 HOH B 6 551 29 HOH HOH . N 4 HOH B 7 552 32 HOH HOH . N 4 HOH B 8 553 34 HOH HOH . N 4 HOH B 9 554 45 HOH HOH . N 4 HOH B 10 555 46 HOH HOH . N 4 HOH B 11 556 60 HOH HOH . N 4 HOH B 12 557 61 HOH HOH . O 4 HOH C 1 546 3 HOH HOH . O 4 HOH C 2 547 7 HOH HOH . O 4 HOH C 3 548 10 HOH HOH . O 4 HOH C 4 549 16 HOH HOH . O 4 HOH C 5 550 18 HOH HOH . O 4 HOH C 6 551 21 HOH HOH . O 4 HOH C 7 552 23 HOH HOH . O 4 HOH C 8 553 24 HOH HOH . O 4 HOH C 9 554 25 HOH HOH . O 4 HOH C 10 555 35 HOH HOH . O 4 HOH C 11 556 40 HOH HOH . O 4 HOH C 12 557 41 HOH HOH . O 4 HOH C 13 558 51 HOH HOH . O 4 HOH C 14 559 52 HOH HOH . O 4 HOH C 15 560 53 HOH HOH . O 4 HOH C 16 561 62 HOH HOH . P 4 HOH D 1 546 5 HOH HOH . P 4 HOH D 2 547 6 HOH HOH . P 4 HOH D 3 548 9 HOH HOH . P 4 HOH D 4 549 27 HOH HOH . P 4 HOH D 5 550 33 HOH HOH . P 4 HOH D 6 551 36 HOH HOH . P 4 HOH D 7 552 42 HOH HOH . P 4 HOH D 8 553 48 HOH HOH . P 4 HOH D 9 554 54 HOH HOH . P 4 HOH D 10 555 55 HOH HOH . P 4 HOH D 11 556 56 HOH HOH . P 4 HOH D 12 557 57 HOH HOH . P 4 HOH D 13 558 58 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -106.126 _atom_site.Cartn_y 22.664 _atom_site.Cartn_z 48.333 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 544 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #