data_3RWP # _model_server_result.job_id 8A7tyb9rYhmshM-pqsjPKA _model_server_result.datetime_utc '2024-10-19 16:45:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rwp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 3RWP # _exptl.entry_id 3RWP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3RWP _cell.length_a 122.982 _cell.length_b 122.982 _cell.length_c 47.505 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RWP _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 47.505 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 K N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id SEP _struct_conn.ptnr1_label_seq_id 193 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SEP _struct_conn.ptnr1_auth_seq_id 241 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id PHE _struct_conn.ptnr2_label_seq_id 194 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PHE _struct_conn.ptnr2_auth_seq_id 242 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.329 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 191 n n C1 C2 GOL sing 192 n n C1 H11 GOL sing 193 n n C1 H12 GOL sing 194 n n O1 HO1 GOL sing 195 n n C2 O2 GOL sing 196 n n C2 C3 GOL sing 197 n n C2 H2 GOL sing 198 n n O2 HO2 GOL sing 199 n n C3 O3 GOL sing 200 n n C3 H31 GOL sing 201 n n C3 H32 GOL sing 202 n n O3 HO3 GOL sing 203 n n # _atom_sites.entry_id 3RWP _atom_sites.fract_transf_matrix[1][1] 0.008131 _atom_sites.fract_transf_matrix[1][2] 0.004695 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009389 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 901 901 GOL GOL . C 2 GOL A 1 902 902 GOL GOL . D 2 GOL A 1 903 903 GOL GOL . E 3 SO4 A 1 904 904 SO4 SO4 . F 3 SO4 A 1 905 905 SO4 SO4 . G 3 SO4 A 1 906 906 SO4 SO4 . H 3 SO4 A 1 907 907 SO4 SO4 . I 3 SO4 A 1 908 908 SO4 SO4 . J 3 SO4 A 1 909 909 SO4 SO4 . K 2 GOL A 1 910 910 GOL GOL . L 4 ABQ A 1 360 360 ABQ ABQ . M 5 HOH A 1 1 1 HOH HOH . M 5 HOH A 2 2 2 HOH HOH . M 5 HOH A 3 3 3 HOH HOH . M 5 HOH A 4 4 4 HOH HOH . M 5 HOH A 5 5 5 HOH HOH . M 5 HOH A 6 6 6 HOH HOH . M 5 HOH A 7 7 7 HOH HOH . M 5 HOH A 8 8 8 HOH HOH . M 5 HOH A 9 9 9 HOH HOH . M 5 HOH A 10 10 10 HOH HOH . M 5 HOH A 11 11 11 HOH HOH . M 5 HOH A 12 12 12 HOH HOH . M 5 HOH A 13 13 13 HOH HOH . M 5 HOH A 14 14 14 HOH HOH . M 5 HOH A 15 15 15 HOH HOH . M 5 HOH A 16 16 16 HOH HOH . M 5 HOH A 17 17 17 HOH HOH . M 5 HOH A 18 18 18 HOH HOH . M 5 HOH A 19 19 19 HOH HOH . M 5 HOH A 20 20 20 HOH HOH . M 5 HOH A 21 21 21 HOH HOH . M 5 HOH A 22 22 22 HOH HOH . M 5 HOH A 23 23 23 HOH HOH . M 5 HOH A 24 24 24 HOH HOH . M 5 HOH A 25 25 25 HOH HOH . M 5 HOH A 26 27 27 HOH HOH . M 5 HOH A 27 29 29 HOH HOH . M 5 HOH A 28 30 30 HOH HOH . M 5 HOH A 29 31 31 HOH HOH . M 5 HOH A 30 32 32 HOH HOH . M 5 HOH A 31 33 33 HOH HOH . M 5 HOH A 32 34 34 HOH HOH . M 5 HOH A 33 35 35 HOH HOH . M 5 HOH A 34 36 36 HOH HOH . M 5 HOH A 35 37 37 HOH HOH . M 5 HOH A 36 39 39 HOH HOH . M 5 HOH A 37 40 40 HOH HOH . M 5 HOH A 38 41 41 HOH HOH . M 5 HOH A 39 42 42 HOH HOH . M 5 HOH A 40 43 43 HOH HOH . M 5 HOH A 41 44 44 HOH HOH . M 5 HOH A 42 45 45 HOH HOH . M 5 HOH A 43 46 46 HOH HOH . M 5 HOH A 44 47 47 HOH HOH . M 5 HOH A 45 48 48 HOH HOH . M 5 HOH A 46 361 361 HOH HOH . M 5 HOH A 47 362 362 HOH HOH . M 5 HOH A 48 363 363 HOH HOH . M 5 HOH A 49 364 364 HOH HOH . M 5 HOH A 50 365 365 HOH HOH . M 5 HOH A 51 366 366 HOH HOH . M 5 HOH A 52 367 367 HOH HOH . M 5 HOH A 53 368 368 HOH HOH . M 5 HOH A 54 369 369 HOH HOH . M 5 HOH A 55 370 370 HOH HOH . M 5 HOH A 56 371 371 HOH HOH . M 5 HOH A 57 372 372 HOH HOH . M 5 HOH A 58 373 373 HOH HOH . M 5 HOH A 59 374 374 HOH HOH . M 5 HOH A 60 375 375 HOH HOH . M 5 HOH A 61 376 376 HOH HOH . M 5 HOH A 62 377 377 HOH HOH . M 5 HOH A 63 378 378 HOH HOH . M 5 HOH A 64 379 379 HOH HOH . M 5 HOH A 65 380 380 HOH HOH . M 5 HOH A 66 381 381 HOH HOH . M 5 HOH A 67 382 382 HOH HOH . M 5 HOH A 68 383 383 HOH HOH . M 5 HOH A 69 384 384 HOH HOH . M 5 HOH A 70 385 385 HOH HOH . M 5 HOH A 71 386 386 HOH HOH . M 5 HOH A 72 387 387 HOH HOH . M 5 HOH A 73 388 388 HOH HOH . M 5 HOH A 74 389 389 HOH HOH . M 5 HOH A 75 390 390 HOH HOH . M 5 HOH A 76 391 391 HOH HOH . M 5 HOH A 77 392 392 HOH HOH . M 5 HOH A 78 393 393 HOH HOH . M 5 HOH A 79 394 394 HOH HOH . M 5 HOH A 80 395 395 HOH HOH . M 5 HOH A 81 396 396 HOH HOH . M 5 HOH A 82 397 397 HOH HOH . M 5 HOH A 83 398 398 HOH HOH . M 5 HOH A 84 399 399 HOH HOH . M 5 HOH A 85 400 400 HOH HOH . M 5 HOH A 86 401 401 HOH HOH . M 5 HOH A 87 402 402 HOH HOH . M 5 HOH A 88 403 403 HOH HOH . M 5 HOH A 89 404 404 HOH HOH . M 5 HOH A 90 405 405 HOH HOH . M 5 HOH A 91 406 406 HOH HOH . M 5 HOH A 92 407 407 HOH HOH . M 5 HOH A 93 408 408 HOH HOH . M 5 HOH A 94 409 409 HOH HOH . M 5 HOH A 95 410 410 HOH HOH . M 5 HOH A 96 411 411 HOH HOH . M 5 HOH A 97 412 412 HOH HOH . M 5 HOH A 98 413 413 HOH HOH . M 5 HOH A 99 414 414 HOH HOH . M 5 HOH A 100 415 415 HOH HOH . M 5 HOH A 101 416 416 HOH HOH . M 5 HOH A 102 417 417 HOH HOH . M 5 HOH A 103 418 418 HOH HOH . M 5 HOH A 104 419 419 HOH HOH . M 5 HOH A 105 420 420 HOH HOH . M 5 HOH A 106 421 421 HOH HOH . M 5 HOH A 107 422 422 HOH HOH . M 5 HOH A 108 423 423 HOH HOH . M 5 HOH A 109 424 424 HOH HOH . M 5 HOH A 110 425 425 HOH HOH . M 5 HOH A 111 426 426 HOH HOH . M 5 HOH A 112 427 427 HOH HOH . M 5 HOH A 113 428 428 HOH HOH . M 5 HOH A 114 429 429 HOH HOH . M 5 HOH A 115 430 430 HOH HOH . M 5 HOH A 116 431 431 HOH HOH . M 5 HOH A 117 432 432 HOH HOH . M 5 HOH A 118 433 433 HOH HOH . M 5 HOH A 119 434 434 HOH HOH . M 5 HOH A 120 435 435 HOH HOH . M 5 HOH A 121 436 436 HOH HOH . M 5 HOH A 122 437 437 HOH HOH . M 5 HOH A 123 438 438 HOH HOH . M 5 HOH A 124 439 439 HOH HOH . M 5 HOH A 125 440 440 HOH HOH . M 5 HOH A 126 441 441 HOH HOH . M 5 HOH A 127 442 442 HOH HOH . M 5 HOH A 128 443 443 HOH HOH . M 5 HOH A 129 444 444 HOH HOH . M 5 HOH A 130 445 445 HOH HOH . M 5 HOH A 131 446 446 HOH HOH . M 5 HOH A 132 447 447 HOH HOH . M 5 HOH A 133 448 448 HOH HOH . M 5 HOH A 134 449 449 HOH HOH . M 5 HOH A 135 450 450 HOH HOH . M 5 HOH A 136 451 451 HOH HOH . M 5 HOH A 137 452 452 HOH HOH . M 5 HOH A 138 453 453 HOH HOH . M 5 HOH A 139 454 454 HOH HOH . M 5 HOH A 140 455 455 HOH HOH . M 5 HOH A 141 456 456 HOH HOH . M 5 HOH A 142 457 457 HOH HOH . M 5 HOH A 143 458 458 HOH HOH . M 5 HOH A 144 459 459 HOH HOH . M 5 HOH A 145 460 460 HOH HOH . M 5 HOH A 146 461 461 HOH HOH . M 5 HOH A 147 462 462 HOH HOH . M 5 HOH A 148 463 463 HOH HOH . M 5 HOH A 149 464 464 HOH HOH . M 5 HOH A 150 465 465 HOH HOH . M 5 HOH A 151 466 466 HOH HOH . M 5 HOH A 152 467 467 HOH HOH . M 5 HOH A 153 468 468 HOH HOH . M 5 HOH A 154 469 469 HOH HOH . M 5 HOH A 155 470 470 HOH HOH . M 5 HOH A 156 471 471 HOH HOH . M 5 HOH A 157 472 472 HOH HOH . M 5 HOH A 158 473 473 HOH HOH . M 5 HOH A 159 474 474 HOH HOH . M 5 HOH A 160 475 475 HOH HOH . M 5 HOH A 161 476 476 HOH HOH . M 5 HOH A 162 477 477 HOH HOH . M 5 HOH A 163 478 478 HOH HOH . M 5 HOH A 164 479 479 HOH HOH . M 5 HOH A 165 480 480 HOH HOH . M 5 HOH A 166 481 481 HOH HOH . M 5 HOH A 167 482 482 HOH HOH . M 5 HOH A 168 483 483 HOH HOH . M 5 HOH A 169 484 484 HOH HOH . M 5 HOH A 170 485 485 HOH HOH . M 5 HOH A 171 486 486 HOH HOH . M 5 HOH A 172 487 487 HOH HOH . M 5 HOH A 173 488 488 HOH HOH . M 5 HOH A 174 489 489 HOH HOH . M 5 HOH A 175 490 490 HOH HOH . M 5 HOH A 176 491 491 HOH HOH . M 5 HOH A 177 492 492 HOH HOH . M 5 HOH A 178 493 493 HOH HOH . M 5 HOH A 179 494 494 HOH HOH . M 5 HOH A 180 495 495 HOH HOH . M 5 HOH A 181 496 496 HOH HOH . M 5 HOH A 182 497 497 HOH HOH . M 5 HOH A 183 498 498 HOH HOH . M 5 HOH A 184 499 499 HOH HOH . M 5 HOH A 185 500 500 HOH HOH . M 5 HOH A 186 501 501 HOH HOH . M 5 HOH A 187 502 502 HOH HOH . M 5 HOH A 188 503 503 HOH HOH . M 5 HOH A 189 504 504 HOH HOH . M 5 HOH A 190 505 505 HOH HOH . M 5 HOH A 191 506 506 HOH HOH . M 5 HOH A 192 507 507 HOH HOH . M 5 HOH A 193 508 508 HOH HOH . M 5 HOH A 194 509 509 HOH HOH . M 5 HOH A 195 510 510 HOH HOH . M 5 HOH A 196 511 511 HOH HOH . M 5 HOH A 197 512 512 HOH HOH . M 5 HOH A 198 513 513 HOH HOH . M 5 HOH A 199 514 514 HOH HOH . M 5 HOH A 200 515 515 HOH HOH . M 5 HOH A 201 516 516 HOH HOH . M 5 HOH A 202 517 517 HOH HOH . M 5 HOH A 203 518 518 HOH HOH . M 5 HOH A 204 519 519 HOH HOH . M 5 HOH A 205 520 520 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 22.371 34.112 29.787 1 37.14 ? C1 GOL 901 A 1 HETATM 2 O O1 GOL . . . B 2 20.994 34.476 29.611 1 44.54 ? O1 GOL 901 A 1 HETATM 3 C C2 GOL . . . B 2 22.932 33.229 28.71 1 36.91 ? C2 GOL 901 A 1 HETATM 4 O O2 GOL . . . B 2 21.973 32.416 28.151 1 42.48 ? O2 GOL 901 A 1 HETATM 5 C C3 GOL . . . B 2 23.592 32.107 29.412 1 40.63 ? C3 GOL 901 A 1 HETATM 6 O O3 GOL . . . B 2 24.898 32.029 28.985 1 23.28 ? O3 GOL 901 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #