data_3RWP
#
_model_server_result.job_id            5WyySXBhU9bwF-14rHKjXA 
_model_server_result.datetime_utc      '2024-12-02 19:07:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3rwp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":903}' 
#
_entry.id    3RWP 
#
_exptl.entry_id    3RWP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3RWP 
_cell.length_a            122.982 
_cell.length_b            122.982 
_cell.length_c            47.505 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3RWP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 47.505 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 K N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            C 
_struct_conn.ptnr1_label_comp_id            SEP 
_struct_conn.ptnr1_label_seq_id             193 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             SEP 
_struct_conn.ptnr1_auth_seq_id              241 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            N 
_struct_conn.ptnr2_label_comp_id            PHE 
_struct_conn.ptnr2_label_seq_id             194 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             PHE 
_struct_conn.ptnr2_auth_seq_id              242 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.329 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 191 n n 
C1 C2 GOL sing 192 n n 
C1 H11 GOL sing 193 n n 
C1 H12 GOL sing 194 n n 
O1 HO1 GOL sing 195 n n 
C2 O2 GOL sing 196 n n 
C2 C3 GOL sing 197 n n 
C2 H2 GOL sing 198 n n 
O2 HO2 GOL sing 199 n n 
C3 O3 GOL sing 200 n n 
C3 H31 GOL sing 201 n n 
C3 H32 GOL sing 202 n n 
O3 HO3 GOL sing 203 n n 
#
_atom_sites.entry_id                     3RWP 
_atom_sites.fract_transf_matrix[1][1]    0.008131 
_atom_sites.fract_transf_matrix[1][2]    0.004695 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009389 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02105 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 901 901 GOL GOL . 
C 2 GOL A 1 902 902 GOL GOL . 
D 2 GOL A 1 903 903 GOL GOL . 
E 3 SO4 A 1 904 904 SO4 SO4 . 
F 3 SO4 A 1 905 905 SO4 SO4 . 
G 3 SO4 A 1 906 906 SO4 SO4 . 
H 3 SO4 A 1 907 907 SO4 SO4 . 
I 3 SO4 A 1 908 908 SO4 SO4 . 
J 3 SO4 A 1 909 909 SO4 SO4 . 
K 2 GOL A 1 910 910 GOL GOL . 
L 4 ABQ A 1 360 360 ABQ ABQ . 
M 5 HOH A 1 1 1 HOH HOH . 
M 5 HOH A 2 2 2 HOH HOH . 
M 5 HOH A 3 3 3 HOH HOH . 
M 5 HOH A 4 4 4 HOH HOH . 
M 5 HOH A 5 5 5 HOH HOH . 
M 5 HOH A 6 6 6 HOH HOH . 
M 5 HOH A 7 7 7 HOH HOH . 
M 5 HOH A 8 8 8 HOH HOH . 
M 5 HOH A 9 9 9 HOH HOH . 
M 5 HOH A 10 10 10 HOH HOH . 
M 5 HOH A 11 11 11 HOH HOH . 
M 5 HOH A 12 12 12 HOH HOH . 
M 5 HOH A 13 13 13 HOH HOH . 
M 5 HOH A 14 14 14 HOH HOH . 
M 5 HOH A 15 15 15 HOH HOH . 
M 5 HOH A 16 16 16 HOH HOH . 
M 5 HOH A 17 17 17 HOH HOH . 
M 5 HOH A 18 18 18 HOH HOH . 
M 5 HOH A 19 19 19 HOH HOH . 
M 5 HOH A 20 20 20 HOH HOH . 
M 5 HOH A 21 21 21 HOH HOH . 
M 5 HOH A 22 22 22 HOH HOH . 
M 5 HOH A 23 23 23 HOH HOH . 
M 5 HOH A 24 24 24 HOH HOH . 
M 5 HOH A 25 25 25 HOH HOH . 
M 5 HOH A 26 27 27 HOH HOH . 
M 5 HOH A 27 29 29 HOH HOH . 
M 5 HOH A 28 30 30 HOH HOH . 
M 5 HOH A 29 31 31 HOH HOH . 
M 5 HOH A 30 32 32 HOH HOH . 
M 5 HOH A 31 33 33 HOH HOH . 
M 5 HOH A 32 34 34 HOH HOH . 
M 5 HOH A 33 35 35 HOH HOH . 
M 5 HOH A 34 36 36 HOH HOH . 
M 5 HOH A 35 37 37 HOH HOH . 
M 5 HOH A 36 39 39 HOH HOH . 
M 5 HOH A 37 40 40 HOH HOH . 
M 5 HOH A 38 41 41 HOH HOH . 
M 5 HOH A 39 42 42 HOH HOH . 
M 5 HOH A 40 43 43 HOH HOH . 
M 5 HOH A 41 44 44 HOH HOH . 
M 5 HOH A 42 45 45 HOH HOH . 
M 5 HOH A 43 46 46 HOH HOH . 
M 5 HOH A 44 47 47 HOH HOH . 
M 5 HOH A 45 48 48 HOH HOH . 
M 5 HOH A 46 361 361 HOH HOH . 
M 5 HOH A 47 362 362 HOH HOH . 
M 5 HOH A 48 363 363 HOH HOH . 
M 5 HOH A 49 364 364 HOH HOH . 
M 5 HOH A 50 365 365 HOH HOH . 
M 5 HOH A 51 366 366 HOH HOH . 
M 5 HOH A 52 367 367 HOH HOH . 
M 5 HOH A 53 368 368 HOH HOH . 
M 5 HOH A 54 369 369 HOH HOH . 
M 5 HOH A 55 370 370 HOH HOH . 
M 5 HOH A 56 371 371 HOH HOH . 
M 5 HOH A 57 372 372 HOH HOH . 
M 5 HOH A 58 373 373 HOH HOH . 
M 5 HOH A 59 374 374 HOH HOH . 
M 5 HOH A 60 375 375 HOH HOH . 
M 5 HOH A 61 376 376 HOH HOH . 
M 5 HOH A 62 377 377 HOH HOH . 
M 5 HOH A 63 378 378 HOH HOH . 
M 5 HOH A 64 379 379 HOH HOH . 
M 5 HOH A 65 380 380 HOH HOH . 
M 5 HOH A 66 381 381 HOH HOH . 
M 5 HOH A 67 382 382 HOH HOH . 
M 5 HOH A 68 383 383 HOH HOH . 
M 5 HOH A 69 384 384 HOH HOH . 
M 5 HOH A 70 385 385 HOH HOH . 
M 5 HOH A 71 386 386 HOH HOH . 
M 5 HOH A 72 387 387 HOH HOH . 
M 5 HOH A 73 388 388 HOH HOH . 
M 5 HOH A 74 389 389 HOH HOH . 
M 5 HOH A 75 390 390 HOH HOH . 
M 5 HOH A 76 391 391 HOH HOH . 
M 5 HOH A 77 392 392 HOH HOH . 
M 5 HOH A 78 393 393 HOH HOH . 
M 5 HOH A 79 394 394 HOH HOH . 
M 5 HOH A 80 395 395 HOH HOH . 
M 5 HOH A 81 396 396 HOH HOH . 
M 5 HOH A 82 397 397 HOH HOH . 
M 5 HOH A 83 398 398 HOH HOH . 
M 5 HOH A 84 399 399 HOH HOH . 
M 5 HOH A 85 400 400 HOH HOH . 
M 5 HOH A 86 401 401 HOH HOH . 
M 5 HOH A 87 402 402 HOH HOH . 
M 5 HOH A 88 403 403 HOH HOH . 
M 5 HOH A 89 404 404 HOH HOH . 
M 5 HOH A 90 405 405 HOH HOH . 
M 5 HOH A 91 406 406 HOH HOH . 
M 5 HOH A 92 407 407 HOH HOH . 
M 5 HOH A 93 408 408 HOH HOH . 
M 5 HOH A 94 409 409 HOH HOH . 
M 5 HOH A 95 410 410 HOH HOH . 
M 5 HOH A 96 411 411 HOH HOH . 
M 5 HOH A 97 412 412 HOH HOH . 
M 5 HOH A 98 413 413 HOH HOH . 
M 5 HOH A 99 414 414 HOH HOH . 
M 5 HOH A 100 415 415 HOH HOH . 
M 5 HOH A 101 416 416 HOH HOH . 
M 5 HOH A 102 417 417 HOH HOH . 
M 5 HOH A 103 418 418 HOH HOH . 
M 5 HOH A 104 419 419 HOH HOH . 
M 5 HOH A 105 420 420 HOH HOH . 
M 5 HOH A 106 421 421 HOH HOH . 
M 5 HOH A 107 422 422 HOH HOH . 
M 5 HOH A 108 423 423 HOH HOH . 
M 5 HOH A 109 424 424 HOH HOH . 
M 5 HOH A 110 425 425 HOH HOH . 
M 5 HOH A 111 426 426 HOH HOH . 
M 5 HOH A 112 427 427 HOH HOH . 
M 5 HOH A 113 428 428 HOH HOH . 
M 5 HOH A 114 429 429 HOH HOH . 
M 5 HOH A 115 430 430 HOH HOH . 
M 5 HOH A 116 431 431 HOH HOH . 
M 5 HOH A 117 432 432 HOH HOH . 
M 5 HOH A 118 433 433 HOH HOH . 
M 5 HOH A 119 434 434 HOH HOH . 
M 5 HOH A 120 435 435 HOH HOH . 
M 5 HOH A 121 436 436 HOH HOH . 
M 5 HOH A 122 437 437 HOH HOH . 
M 5 HOH A 123 438 438 HOH HOH . 
M 5 HOH A 124 439 439 HOH HOH . 
M 5 HOH A 125 440 440 HOH HOH . 
M 5 HOH A 126 441 441 HOH HOH . 
M 5 HOH A 127 442 442 HOH HOH . 
M 5 HOH A 128 443 443 HOH HOH . 
M 5 HOH A 129 444 444 HOH HOH . 
M 5 HOH A 130 445 445 HOH HOH . 
M 5 HOH A 131 446 446 HOH HOH . 
M 5 HOH A 132 447 447 HOH HOH . 
M 5 HOH A 133 448 448 HOH HOH . 
M 5 HOH A 134 449 449 HOH HOH . 
M 5 HOH A 135 450 450 HOH HOH . 
M 5 HOH A 136 451 451 HOH HOH . 
M 5 HOH A 137 452 452 HOH HOH . 
M 5 HOH A 138 453 453 HOH HOH . 
M 5 HOH A 139 454 454 HOH HOH . 
M 5 HOH A 140 455 455 HOH HOH . 
M 5 HOH A 141 456 456 HOH HOH . 
M 5 HOH A 142 457 457 HOH HOH . 
M 5 HOH A 143 458 458 HOH HOH . 
M 5 HOH A 144 459 459 HOH HOH . 
M 5 HOH A 145 460 460 HOH HOH . 
M 5 HOH A 146 461 461 HOH HOH . 
M 5 HOH A 147 462 462 HOH HOH . 
M 5 HOH A 148 463 463 HOH HOH . 
M 5 HOH A 149 464 464 HOH HOH . 
M 5 HOH A 150 465 465 HOH HOH . 
M 5 HOH A 151 466 466 HOH HOH . 
M 5 HOH A 152 467 467 HOH HOH . 
M 5 HOH A 153 468 468 HOH HOH . 
M 5 HOH A 154 469 469 HOH HOH . 
M 5 HOH A 155 470 470 HOH HOH . 
M 5 HOH A 156 471 471 HOH HOH . 
M 5 HOH A 157 472 472 HOH HOH . 
M 5 HOH A 158 473 473 HOH HOH . 
M 5 HOH A 159 474 474 HOH HOH . 
M 5 HOH A 160 475 475 HOH HOH . 
M 5 HOH A 161 476 476 HOH HOH . 
M 5 HOH A 162 477 477 HOH HOH . 
M 5 HOH A 163 478 478 HOH HOH . 
M 5 HOH A 164 479 479 HOH HOH . 
M 5 HOH A 165 480 480 HOH HOH . 
M 5 HOH A 166 481 481 HOH HOH . 
M 5 HOH A 167 482 482 HOH HOH . 
M 5 HOH A 168 483 483 HOH HOH . 
M 5 HOH A 169 484 484 HOH HOH . 
M 5 HOH A 170 485 485 HOH HOH . 
M 5 HOH A 171 486 486 HOH HOH . 
M 5 HOH A 172 487 487 HOH HOH . 
M 5 HOH A 173 488 488 HOH HOH . 
M 5 HOH A 174 489 489 HOH HOH . 
M 5 HOH A 175 490 490 HOH HOH . 
M 5 HOH A 176 491 491 HOH HOH . 
M 5 HOH A 177 492 492 HOH HOH . 
M 5 HOH A 178 493 493 HOH HOH . 
M 5 HOH A 179 494 494 HOH HOH . 
M 5 HOH A 180 495 495 HOH HOH . 
M 5 HOH A 181 496 496 HOH HOH . 
M 5 HOH A 182 497 497 HOH HOH . 
M 5 HOH A 183 498 498 HOH HOH . 
M 5 HOH A 184 499 499 HOH HOH . 
M 5 HOH A 185 500 500 HOH HOH . 
M 5 HOH A 186 501 501 HOH HOH . 
M 5 HOH A 187 502 502 HOH HOH . 
M 5 HOH A 188 503 503 HOH HOH . 
M 5 HOH A 189 504 504 HOH HOH . 
M 5 HOH A 190 505 505 HOH HOH . 
M 5 HOH A 191 506 506 HOH HOH . 
M 5 HOH A 192 507 507 HOH HOH . 
M 5 HOH A 193 508 508 HOH HOH . 
M 5 HOH A 194 509 509 HOH HOH . 
M 5 HOH A 195 510 510 HOH HOH . 
M 5 HOH A 196 511 511 HOH HOH . 
M 5 HOH A 197 512 512 HOH HOH . 
M 5 HOH A 198 513 513 HOH HOH . 
M 5 HOH A 199 514 514 HOH HOH . 
M 5 HOH A 200 515 515 HOH HOH . 
M 5 HOH A 201 516 516 HOH HOH . 
M 5 HOH A 202 517 517 HOH HOH . 
M 5 HOH A 203 518 518 HOH HOH . 
M 5 HOH A 204 519 519 HOH HOH . 
M 5 HOH A 205 520 520 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 2 36.58 34.149 -3.257 1 37.72 ? C1 GOL 903 A 1 
HETATM 2 O O1 GOL . . . D 2 37.933 34.45 -3.006 1 31.25 ? O1 GOL 903 A 1 
HETATM 3 C C2 GOL . . . D 2 35.99 34.951 -4.379 1 42.66 ? C2 GOL 903 A 1 
HETATM 4 O O2 GOL . . . D 2 36.949 35.401 -5.326 1 39.38 ? O2 GOL 903 A 1 
HETATM 5 C C3 GOL . . . D 2 35.17 36.072 -3.728 1 44.84 ? C3 GOL 903 A 1 
HETATM 6 O O3 GOL . . . D 2 34.87 36.894 -4.829 1 47.45 ? O3 GOL 903 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           363 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           6 
#