data_3RWQ # _model_server_result.job_id woXPFwVx0tFXyi7Rp2XPTg _model_server_result.datetime_utc '2024-11-07 03:22:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rwq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":9003}' # _entry.id 3RWQ # _exptl.entry_id 3RWQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3RWQ _cell.length_a 123.213 _cell.length_b 123.213 _cell.length_c 47.424 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RWQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -15.808 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 192 A ASN 240 1_555 A N SEP 193 A SEP 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C SEP 193 A SEP 241 1_555 A N PHE 194 A PHE 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 184 n n C1 C2 GOL sing 185 n n C1 H11 GOL sing 186 n n C1 H12 GOL sing 187 n n O1 HO1 GOL sing 188 n n C2 O2 GOL sing 189 n n C2 C3 GOL sing 190 n n C2 H2 GOL sing 191 n n O2 HO2 GOL sing 192 n n C3 O3 GOL sing 193 n n C3 H31 GOL sing 194 n n C3 H32 GOL sing 195 n n O3 HO3 GOL sing 196 n n # _atom_sites.entry_id 3RWQ _atom_sites.fract_transf_matrix[1][1] 0.008116 _atom_sites.fract_transf_matrix[1][2] 0.004686 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009372 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021086 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3RW A 1 1 1 3RW 3RW . C 3 GOL A 1 9001 9001 GOL GOL . D 3 GOL A 1 9002 9002 GOL GOL . E 3 GOL A 1 9003 9003 GOL GOL . F 4 SO4 A 1 9004 9004 SO4 SO4 . G 4 SO4 A 1 9005 9005 SO4 SO4 . H 4 SO4 A 1 9006 9006 SO4 SO4 . I 4 SO4 A 1 9007 9007 SO4 SO4 . J 4 SO4 A 1 9008 9008 SO4 SO4 . K 4 SO4 A 1 9009 9009 SO4 SO4 . L 4 SO4 A 1 9010 9010 SO4 SO4 . M 5 HOH A 1 2 2 HOH HOH . M 5 HOH A 2 3 3 HOH HOH . M 5 HOH A 3 4 4 HOH HOH . M 5 HOH A 4 5 5 HOH HOH . M 5 HOH A 5 6 6 HOH HOH . M 5 HOH A 6 7 7 HOH HOH . M 5 HOH A 7 8 8 HOH HOH . M 5 HOH A 8 9 9 HOH HOH . M 5 HOH A 9 10 10 HOH HOH . M 5 HOH A 10 11 11 HOH HOH . M 5 HOH A 11 12 12 HOH HOH . M 5 HOH A 12 13 13 HOH HOH . M 5 HOH A 13 14 14 HOH HOH . M 5 HOH A 14 15 15 HOH HOH . M 5 HOH A 15 16 16 HOH HOH . M 5 HOH A 16 17 17 HOH HOH . M 5 HOH A 17 18 18 HOH HOH . M 5 HOH A 18 19 19 HOH HOH . M 5 HOH A 19 20 20 HOH HOH . M 5 HOH A 20 21 21 HOH HOH . M 5 HOH A 21 22 22 HOH HOH . M 5 HOH A 22 23 23 HOH HOH . M 5 HOH A 23 24 24 HOH HOH . M 5 HOH A 24 25 25 HOH HOH . M 5 HOH A 25 26 26 HOH HOH . M 5 HOH A 26 27 27 HOH HOH . M 5 HOH A 27 28 28 HOH HOH . M 5 HOH A 28 29 29 HOH HOH . M 5 HOH A 29 30 30 HOH HOH . M 5 HOH A 30 31 31 HOH HOH . M 5 HOH A 31 32 32 HOH HOH . M 5 HOH A 32 33 33 HOH HOH . M 5 HOH A 33 34 34 HOH HOH . M 5 HOH A 34 35 35 HOH HOH . M 5 HOH A 35 37 37 HOH HOH . M 5 HOH A 36 38 38 HOH HOH . M 5 HOH A 37 39 39 HOH HOH . M 5 HOH A 38 40 40 HOH HOH . M 5 HOH A 39 41 41 HOH HOH . M 5 HOH A 40 42 42 HOH HOH . M 5 HOH A 41 43 43 HOH HOH . M 5 HOH A 42 44 44 HOH HOH . M 5 HOH A 43 45 45 HOH HOH . M 5 HOH A 44 46 46 HOH HOH . M 5 HOH A 45 47 47 HOH HOH . M 5 HOH A 46 48 48 HOH HOH . M 5 HOH A 47 360 49 HOH HOH . M 5 HOH A 48 361 50 HOH HOH . M 5 HOH A 49 362 51 HOH HOH . M 5 HOH A 50 363 52 HOH HOH . M 5 HOH A 51 364 53 HOH HOH . M 5 HOH A 52 365 54 HOH HOH . M 5 HOH A 53 366 55 HOH HOH . M 5 HOH A 54 367 56 HOH HOH . M 5 HOH A 55 368 57 HOH HOH . M 5 HOH A 56 369 58 HOH HOH . M 5 HOH A 57 370 60 HOH HOH . M 5 HOH A 58 371 61 HOH HOH . M 5 HOH A 59 372 62 HOH HOH . M 5 HOH A 60 373 63 HOH HOH . M 5 HOH A 61 374 64 HOH HOH . M 5 HOH A 62 375 65 HOH HOH . M 5 HOH A 63 376 66 HOH HOH . M 5 HOH A 64 377 67 HOH HOH . M 5 HOH A 65 378 68 HOH HOH . M 5 HOH A 66 379 69 HOH HOH . M 5 HOH A 67 380 70 HOH HOH . M 5 HOH A 68 381 71 HOH HOH . M 5 HOH A 69 382 72 HOH HOH . M 5 HOH A 70 383 73 HOH HOH . M 5 HOH A 71 384 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 25.241 -30.525 6.495 1 49.7 ? C1 GOL 9003 A 1 HETATM 2 O O1 GOL . . . E 3 25.271 -31.912 6.385 1 54.3 ? O1 GOL 9003 A 1 HETATM 3 C C2 GOL . . . E 3 23.795 -30.152 6.409 1 45.65 ? C2 GOL 9003 A 1 HETATM 4 O O2 GOL . . . E 3 23.74 -28.847 6.869 1 49.47 ? O2 GOL 9003 A 1 HETATM 5 C C3 GOL . . . E 3 23.385 -29.969 4.988 1 45.74 ? C3 GOL 9003 A 1 HETATM 6 O O3 GOL . . . E 3 22.147 -29.273 5.046 1 44.33 ? O3 GOL 9003 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #