data_3RWX # _model_server_result.job_id BWuU10oa4IeE2maVJ9WFSg _model_server_result.datetime_utc '2024-11-13 07:57:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rwx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":291}' # _entry.id 3RWX # _exptl.entry_id 3RWX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3RWX _cell.length_a 154.154 _cell.length_b 154.154 _cell.length_c 40.164 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RWX _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 9 A ASN 31 1_555 A N MLY 10 A MLY 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C MLY 10 A MLY 32 1_555 A N ALA 11 A ALA 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C GLY 16 A GLY 38 1_555 A N MLY 17 A MLY 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale4 A C MLY 17 A MLY 39 1_555 A N TYR 18 A TYR 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale5 A C ALA 27 A ALA 49 1_555 A N MSE 28 A MSE 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 A C MSE 28 A MSE 50 1_555 A N PHE 29 A PHE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale7 A C VAL 33 A VAL 55 1_555 A N MSE 34 A MSE 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 A C MSE 34 A MSE 56 1_555 A N GLY 35 A GLY 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 A C GLU 36 A GLU 58 1_555 A N MLY 37 A MLY 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 A C MLY 37 A MLY 59 1_555 A N SER 38 A SER 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale11 A C PHE 61 A PHE 83 1_555 A N MLY 62 A MLY 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale12 A C MLY 62 A MLY 84 1_555 A N LEU 63 A LEU 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale13 A C ILE 66 A ILE 88 1_555 A N MLY 67 A MLY 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale14 A C MLY 67 A MLY 89 1_555 A N VAL 68 A VAL 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale15 A C SER 70 A SER 92 1_555 A N MLY 71 A MLY 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale16 A C MLY 71 A MLY 93 1_555 A N THR 72 A THR 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale17 A C SER 82 A SER 104 1_555 A N MSE 83 A MSE 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale18 A C MSE 83 A MSE 105 1_555 A N ASN 84 A ASN 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale19 A C ASP 85 A ASP 107 1_555 A N MLY 86 A MLY 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale20 A C MLY 86 A MLY 108 1_555 A N PRO 87 A PRO 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.362 ? covale ? covale21 A C ALA 90 A ALA 112 1_555 A N MLY 91 A MLY 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale22 A C MLY 91 A MLY 113 1_555 A N ASP 92 A ASP 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale23 A C GLN 103 A GLN 125 1_555 A N MLY 104 A MLY 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale24 A C MLY 104 A MLY 126 1_555 A N LEU 105 A LEU 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale25 A C LEU 107 A LEU 129 1_555 A N MLY 108 A MLY 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale26 A C MLY 108 A MLY 130 1_555 A N VAL 109 A VAL 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale27 A C VAL 114 A VAL 136 1_555 A N MSE 115 A MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale28 A C MSE 115 A MSE 137 1_555 A N GLY 116 A GLY 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale29 A C ASN 138 A ASN 160 1_555 A N MLY 139 A MLY 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale30 A C MLY 139 A MLY 161 1_555 A N GLU 140 A GLU 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale31 A C CYS 158 A CYS 180 1_555 A N MLY 159 A MLY 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale32 A C MLY 159 A MLY 181 1_555 A N VAL 160 A VAL 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale33 A C ILE 162 A ILE 184 1_555 A N MLY 163 A MLY 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale34 A C MLY 163 A MLY 185 1_555 A N ARG 164 A ARG 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale35 A C LEU 174 A LEU 196 1_555 A N MLY 175 A MLY 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale36 A C MLY 175 A MLY 197 1_555 A N GLY 176 A GLY 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale37 A C ALA 188 A ALA 210 1_555 A N MSE 189 A MSE 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale38 A C MSE 189 A MSE 211 1_555 A N ASN 190 A ASN 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale39 A C VAL 199 A VAL 221 1_555 A N MLY 200 A MLY 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale40 A C MLY 200 A MLY 222 1_555 A N VAL 201 A VAL 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale41 A C PHE 209 A PHE 231 1_555 A N MLY 210 A MLY 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale42 A C MLY 210 A MLY 232 1_555 A N ILE 211 A ILE 233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale43 A C PHE 244 A PHE 266 1_555 A N MLY 245 A MLY 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale44 A C MLY 245 A MLY 267 1_555 A N PRO 246 A PRO 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale45 A C ALA 248 A ALA 270 1_555 A N MSE 249 A MSE 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale46 A C MSE 249 A MSE 271 1_555 A N PRO 250 A PRO 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale47 A C ALA 255 A ALA 277 1_555 A N MSE 256 A MSE 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale48 A C MSE 256 A MSE 278 1_555 A N PHE 257 A PHE 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale49 A C PHE 257 A PHE 279 1_555 A N MLY 258 A MLY 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale50 A C MLY 258 A MLY 280 1_555 A N GLY 259 A GLY 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale51 A C GLY 259 A GLY 281 1_555 A N MLY 260 A MLY 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale52 A C MLY 260 A MLY 282 1_555 A N MLY 261 A MLY 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 3RWX _atom_sites.fract_transf_matrix[1][1] 0.006487 _atom_sites.fract_transf_matrix[1][2] 0.003745 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007491 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024898 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 284 284 SO4 SO4 . C 2 SO4 A 1 285 285 SO4 SO4 . D 3 GOL A 1 286 286 GOL GOL . E 3 GOL A 1 287 287 GOL GOL . F 3 GOL A 1 288 288 GOL GOL . G 3 GOL A 1 289 289 GOL GOL . H 3 GOL A 1 290 290 GOL GOL . I 3 GOL A 1 291 291 GOL GOL . J 3 GOL A 1 292 292 GOL GOL . K 4 HOH A 1 293 293 HOH HOH . K 4 HOH A 2 294 294 HOH HOH . K 4 HOH A 3 295 295 HOH HOH . K 4 HOH A 4 296 296 HOH HOH . K 4 HOH A 5 297 297 HOH HOH . K 4 HOH A 6 298 298 HOH HOH . K 4 HOH A 7 299 299 HOH HOH . K 4 HOH A 8 300 300 HOH HOH . K 4 HOH A 9 301 301 HOH HOH . K 4 HOH A 10 302 302 HOH HOH . K 4 HOH A 11 303 303 HOH HOH . K 4 HOH A 12 304 304 HOH HOH . K 4 HOH A 13 305 305 HOH HOH . K 4 HOH A 14 306 306 HOH HOH . K 4 HOH A 15 307 307 HOH HOH . K 4 HOH A 16 308 308 HOH HOH . K 4 HOH A 17 309 309 HOH HOH . K 4 HOH A 18 310 310 HOH HOH . K 4 HOH A 19 311 311 HOH HOH . K 4 HOH A 20 312 312 HOH HOH . K 4 HOH A 21 313 313 HOH HOH . K 4 HOH A 22 314 314 HOH HOH . K 4 HOH A 23 315 315 HOH HOH . K 4 HOH A 24 316 316 HOH HOH . K 4 HOH A 25 317 317 HOH HOH . K 4 HOH A 26 318 318 HOH HOH . K 4 HOH A 27 319 319 HOH HOH . K 4 HOH A 28 320 320 HOH HOH . K 4 HOH A 29 321 321 HOH HOH . K 4 HOH A 30 322 322 HOH HOH . K 4 HOH A 31 323 323 HOH HOH . K 4 HOH A 32 324 324 HOH HOH . K 4 HOH A 33 325 325 HOH HOH . K 4 HOH A 34 326 326 HOH HOH . K 4 HOH A 35 327 327 HOH HOH . K 4 HOH A 36 328 328 HOH HOH . K 4 HOH A 37 329 329 HOH HOH . K 4 HOH A 38 330 330 HOH HOH . K 4 HOH A 39 331 331 HOH HOH . K 4 HOH A 40 332 332 HOH HOH . K 4 HOH A 41 333 333 HOH HOH . K 4 HOH A 42 334 334 HOH HOH . K 4 HOH A 43 335 335 HOH HOH . K 4 HOH A 44 336 336 HOH HOH . K 4 HOH A 45 337 337 HOH HOH . K 4 HOH A 46 338 338 HOH HOH . K 4 HOH A 47 339 339 HOH HOH . K 4 HOH A 48 340 340 HOH HOH . K 4 HOH A 49 341 341 HOH HOH . K 4 HOH A 50 342 342 HOH HOH . K 4 HOH A 51 343 343 HOH HOH . K 4 HOH A 52 344 344 HOH HOH . K 4 HOH A 53 345 345 HOH HOH . K 4 HOH A 54 346 346 HOH HOH . K 4 HOH A 55 347 347 HOH HOH . K 4 HOH A 56 348 348 HOH HOH . K 4 HOH A 57 349 349 HOH HOH . K 4 HOH A 58 350 350 HOH HOH . K 4 HOH A 59 351 351 HOH HOH . K 4 HOH A 60 352 352 HOH HOH . K 4 HOH A 61 353 353 HOH HOH . K 4 HOH A 62 354 354 HOH HOH . K 4 HOH A 63 355 355 HOH HOH . K 4 HOH A 64 356 356 HOH HOH . K 4 HOH A 65 357 357 HOH HOH . K 4 HOH A 66 358 358 HOH HOH . K 4 HOH A 67 359 359 HOH HOH . K 4 HOH A 68 360 360 HOH HOH . K 4 HOH A 69 361 361 HOH HOH . K 4 HOH A 70 362 362 HOH HOH . K 4 HOH A 71 363 363 HOH HOH . K 4 HOH A 72 364 364 HOH HOH . K 4 HOH A 73 365 365 HOH HOH . K 4 HOH A 74 366 366 HOH HOH . K 4 HOH A 75 367 367 HOH HOH . K 4 HOH A 76 368 368 HOH HOH . K 4 HOH A 77 369 369 HOH HOH . K 4 HOH A 78 370 370 HOH HOH . K 4 HOH A 79 371 371 HOH HOH . K 4 HOH A 80 372 372 HOH HOH . K 4 HOH A 81 373 373 HOH HOH . K 4 HOH A 82 374 374 HOH HOH . K 4 HOH A 83 375 375 HOH HOH . K 4 HOH A 84 376 376 HOH HOH . K 4 HOH A 85 377 377 HOH HOH . K 4 HOH A 86 378 378 HOH HOH . K 4 HOH A 87 379 379 HOH HOH . K 4 HOH A 88 380 380 HOH HOH . K 4 HOH A 89 381 381 HOH HOH . K 4 HOH A 90 382 382 HOH HOH . K 4 HOH A 91 383 383 HOH HOH . K 4 HOH A 92 384 384 HOH HOH . K 4 HOH A 93 385 385 HOH HOH . K 4 HOH A 94 386 386 HOH HOH . K 4 HOH A 95 387 387 HOH HOH . K 4 HOH A 96 388 388 HOH HOH . K 4 HOH A 97 389 389 HOH HOH . K 4 HOH A 98 390 390 HOH HOH . K 4 HOH A 99 391 391 HOH HOH . K 4 HOH A 100 392 392 HOH HOH . K 4 HOH A 101 393 393 HOH HOH . K 4 HOH A 102 394 394 HOH HOH . K 4 HOH A 103 395 395 HOH HOH . K 4 HOH A 104 396 396 HOH HOH . K 4 HOH A 105 397 397 HOH HOH . K 4 HOH A 106 398 398 HOH HOH . K 4 HOH A 107 399 399 HOH HOH . K 4 HOH A 108 400 400 HOH HOH . K 4 HOH A 109 401 401 HOH HOH . K 4 HOH A 110 402 402 HOH HOH . K 4 HOH A 111 403 403 HOH HOH . K 4 HOH A 112 404 404 HOH HOH . K 4 HOH A 113 405 405 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . I 3 -23.677 28.619 17.356 1 91.41 ? C1 GOL 291 A 1 HETATM 2 O O1 GOL . . . I 3 -24.438 29.728 17.783 1 90.99 ? O1 GOL 291 A 1 HETATM 3 C C2 GOL . . . I 3 -22.391 28.575 18.166 1 91.34 ? C2 GOL 291 A 1 HETATM 4 O O2 GOL . . . I 3 -21.618 29.71 17.87 1 89.97 ? O2 GOL 291 A 1 HETATM 5 C C3 GOL . . . I 3 -21.59 27.313 17.87 1 92.12 ? C3 GOL 291 A 1 HETATM 6 O O3 GOL . . . I 3 -21 26.863 19.072 1 92.38 ? O3 GOL 291 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #