data_3RZF # _model_server_result.job_id UOBl_qHcenEqq_nOZ-X48g _model_server_result.datetime_utc '2025-02-27 23:33:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3rzf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":676}' # _entry.id 3RZF # _exptl.entry_id 3RZF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 437.922 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4-{[4-(4-chlorophenyl)pyrimidin-2-yl]amino}phenyl)[4-(2-hydroxyethyl)piperazin-1-yl]methanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3RZF _cell.length_a 164.656 _cell.length_b 164.656 _cell.length_c 273.458 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3RZF _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H24 Cl N5 O2' _chem_comp.formula_weight 437.922 _chem_comp.id XNM _chem_comp.mon_nstd_flag . _chem_comp.name (4-{[4-(4-chlorophenyl)pyrimidin-2-yl]amino}phenyl)[4-(2-hydroxyethyl)piperazin-1-yl]methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAB CLAA XNM sing 374 n n CAE CAB XNM doub 375 n y CAB CAC XNM sing 376 n y CAD CAC XNM doub 377 n y CAC HAC XNM sing 378 n n CAG CAD XNM sing 379 n y CAD HAD XNM sing 380 n n CAF CAE XNM sing 381 n y CAE HAE XNM sing 382 n n CAF CAG XNM doub 383 n y CAF HAF XNM sing 384 n n CAH CAG XNM sing 385 n y CAP CAH XNM doub 386 n y CAH NAI XNM sing 387 n y CAJ NAI XNM doub 388 n y NAR CAJ XNM sing 389 n y CAJ NAK XNM sing 390 n n NAK CAL XNM sing 391 n n NAK HNAK XNM sing 392 n n CAL CAM XNM doub 393 n y CAL CAS XNM sing 394 n y CAM CAN XNM sing 395 n y CAM HAM XNM sing 396 n n CAN CAU XNM doub 397 n y CAN HAN XNM sing 398 n n OAO CAV XNM doub 399 n n CAQ CAP XNM sing 400 n y CAP HAP XNM sing 401 n n CAQ NAR XNM doub 402 n y CAQ HAQ XNM sing 403 n n CAS CAT XNM doub 404 n y CAS HAS XNM sing 405 n n CAT CAU XNM sing 406 n y CAT HAT XNM sing 407 n n CAU CAV XNM sing 408 n n CAV NAW XNM sing 409 n n NAW CAX XNM sing 410 n n NAW CAZ XNM sing 411 n n CAX CAY XNM sing 412 n n CAX HAX XNM sing 413 n n CAX HAXA XNM sing 414 n n CAY NBB XNM sing 415 n n CAY HAY XNM sing 416 n n CAY HAYA XNM sing 417 n n CAZ CBA XNM sing 418 n n CAZ HAZ XNM sing 419 n n CAZ HAZA XNM sing 420 n n CBA NBB XNM sing 421 n n CBA HBA XNM sing 422 n n CBA HBAA XNM sing 423 n n NBB CBC XNM sing 424 n n CBC CBD XNM sing 425 n n CBC HBC XNM sing 426 n n CBC HBCA XNM sing 427 n n CBD OBE XNM sing 428 n n CBD HBD XNM sing 429 n n CBD HBDA XNM sing 430 n n OBE HOBE XNM sing 431 n n # _atom_sites.entry_id 3RZF _atom_sites.fract_transf_matrix[1][1] 0.006073 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006073 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003657 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id XNM _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 676 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id XNM _pdbx_nonpoly_scheme.auth_mon_id XNM _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CLAA XNM . . . B 2 93.24 -30.943 57.08 1 550 ? CLAA XNM 676 A 1 HETATM 2 C CAB XNM . . . B 2 92.888 -29.795 55.832 1 262.11 ? CAB XNM 676 A 1 HETATM 3 C CAC XNM . . . B 2 91.732 -28.986 55.938 1 263.25 ? CAC XNM 676 A 1 HETATM 4 C CAD XNM . . . B 2 91.455 -28.045 54.926 1 264.49 ? CAD XNM 676 A 1 HETATM 5 C CAE XNM . . . B 2 93.766 -29.689 54.732 1 262.17 ? CAE XNM 676 A 1 HETATM 6 C CAF XNM . . . B 2 93.489 -28.749 53.72 1 263.69 ? CAF XNM 676 A 1 HETATM 7 C CAG XNM . . . B 2 92.333 -27.94 53.826 1 266.57 ? CAG XNM 676 A 1 HETATM 8 C CAH XNM . . . B 2 92.055 -27.021 52.807 1 275.35 ? CAH XNM 676 A 1 HETATM 9 N NAI XNM . . . B 2 90.923 -26.266 52.86 1 279.93 ? NAI XNM 676 A 1 HETATM 10 C CAJ XNM . . . B 2 90.602 -25.408 51.853 1 290.69 ? CAJ XNM 676 A 1 HETATM 11 N NAK XNM . . . B 2 89.502 -24.637 51.939 1 299.85 ? NAK XNM 676 A 1 HETATM 12 C CAL XNM . . . B 2 89.52 -23.326 52.265 1 307.76 ? CAL XNM 676 A 1 HETATM 13 C CAM XNM . . . B 2 89.259 -22.909 53.593 1 310.69 ? CAM XNM 676 A 1 HETATM 14 C CAN XNM . . . B 2 89.341 -21.555 53.924 1 313.1 ? CAN XNM 676 A 1 HETATM 15 O OAO XNM . . . B 2 90.012 -18.337 52.45 1 320.38 ? OAO XNM 676 A 1 HETATM 16 C CAP XNM . . . B 2 92.925 -26.92 51.696 1 283.23 ? CAP XNM 676 A 1 HETATM 17 C CAQ XNM . . . B 2 92.573 -26.027 50.671 1 289.7 ? CAQ XNM 676 A 1 HETATM 18 N NAR XNM . . . B 2 91.445 -25.322 50.788 1 292.37 ? NAR XNM 676 A 1 HETATM 19 C CAS XNM . . . B 2 89.864 -22.39 51.266 1 312.3 ? CAS XNM 676 A 1 HETATM 20 C CAT XNM . . . B 2 89.943 -21.015 51.596 1 314.73 ? CAT XNM 676 A 1 HETATM 21 C CAU XNM . . . B 2 89.679 -20.607 52.928 1 315.35 ? CAU XNM 676 A 1 HETATM 22 C CAV XNM . . . B 2 89.724 -19.182 53.306 1 318.38 ? CAV XNM 676 A 1 HETATM 23 N NAW XNM . . . B 2 89.487 -18.721 54.616 1 319.23 ? NAW XNM 676 A 1 HETATM 24 C CAX XNM . . . B 2 89.558 -17.291 54.896 1 320.14 ? CAX XNM 676 A 1 HETATM 25 C CAY XNM . . . B 2 90.571 -17.036 55.992 1 321.48 ? CAY XNM 676 A 1 HETATM 26 C CAZ XNM . . . B 2 89.175 -19.507 55.807 1 319.62 ? CAZ XNM 676 A 1 HETATM 27 C CBA XNM . . . B 2 90.174 -19.21 56.904 1 320.85 ? CBA XNM 676 A 1 HETATM 28 N NBB XNM . . . B 2 90.246 -17.785 57.202 1 322.27 ? NBB XNM 676 A 1 HETATM 29 C CBC XNM . . . B 2 90.591 -17.402 58.147 1 323.9 ? CBC XNM 676 A 1 HETATM 30 C CBD XNM . . . B 2 92.049 -17.766 58.467 1 325.06 ? CBD XNM 676 A 1 HETATM 31 O OBE XNM . . . B 2 92.22 -19.185 58.57 1 325.69 ? OBE XNM 676 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #